Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <XXXXXXXXXXXXXXXXXXXXXMIR850                                     <------                         --------->GLK1(2)                                      <---------AHL20(1)                <---------ANAC58                                                --------->AHL20(1) --                <---------ANAC46                                --------->ARR11(3)            -------                <---------ANAC58                                <---------ARR11(3)--------->AHL20(1)            <---------MYB46(3)                                  --------->GLK1(2) <---------ARR11(3)     <-------TEIL--------->TOE1(2)                        <-----------GT1      --------->AHL20(2) <-- --ZmHOX2a(1)  <-------TEIL <----------DOF2         <---------ICU4       ----------->GT1      ------- ---TOE2(3) --------->MYB55(2)                     <---------YAB1  <----------DOF2--------->ARR11(3)   aagacgattcatggtggttcgtgcgatattcttttagttcgggttttaatctgatcattttttcaaaatcttttggagtaaatatatattcgtttcaact  18383700                                 --------->TOE1(2)                                               ----                                <---------ANAC58                                                 ----                                <---------ANAC55(2)             <---------YAB1                   <---      <---------AHL20(2)        <---------ANAC58              --------->CCA1(2)                 ----- ---At4g35610                   --------->ANAC55(2)          --------->ARR11(1)             --------- --------->GT1                  --------->ANAC46             <---------ARR11(3)            ---------- -->At4g35610                  <-------TEIL                  --------->ARR11(3)   <---------AHL20(2)- -------TOE2(3)             --------->CCA1(2)       ----------->GT1              --------->AHL20(2) < ---->RAV1(2)          <-----------GT1             <---------TOE2(3)  <----------DOF2      <---------   gaggttatttttttcttacatgtttttacgatatacgtgagaagtagaatagtgaggttataagatatgattctttgattcgatttatttgggctgtaat  18383800                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                             <---------ATHB12                     <-- ----->YAB1                                                --------->WOX13(1)                     <-- ----->AHL20(2)                                        ----------->GT1                            <-- ------AHL20(2)                                     ----------->RAV1(1)                           <-- ---->ICU4                                          --------->MYB52(1)                            <-- >At5g28300                                      --------->ANAC58      <---------ALFIN1           --- ->GT1          <---------ARR14(2)               --------->ANAC58    ------>ZmHOX2a(1)           <--- -------->AHL20(1)                              --------->DAG2<---------ICU4                     ---- ---------AHL20(1)       >>>>>>>ZML2           ---------->DOF2--------->YAB1                   <----- -DOF2          --------->ARR14(2)--------------->AtSPL8 <---------MYB52(1)    <---------MYB52(1)----   tatatattacagagtttgtatacggttctagttgtacttgtactataaataaagcaacagttaatcatctcctccaactctgttattttgttgaaattca  18383900      <---------TOE2(2) ----->MYB46(1) -------->MYB52(1) ----->MYB83 ------->MYB55(1) -------MYB111(2) -------MYB46(2) -------MYB52(2)                                     <---------ICU4 -------MYB59                                        --------->YAB1              <---------YAB1 -------MYB111(1)                                   <---------ATHB12           --------->YAB1 ------>AtMYB61                               --------->At4g35610             <---------YAB1 ------At4g35610          <----------ID1  <---------REM1(1)       --------->At4g35610 ----->ANAC46        --------->ANAC46   <---------ZAT14           <---------At4g35610               < ------GT1   --------->ANAC55(2)        --------->ZAT14   ------->TEIL     --------->AHL20(1)       - ----->ANAC55(2)   <-----------GT1      --------->ZAT18<---------YAB1     --------->YAB1    <--------   cctaaccataggtttacatattcacaaaactacaaatgtgagtgaagtagctaaatcatgaatatttcagctacaaacatattataactcatattcaatt  18384000                                                 <---------ANAC46                                             <-----------HVH21                                            <---------bZIP60(2)                              <-------                                            <---------DEAR3(1)                           <---------AHL20(2)                                            --------->O2                                 --------->AHL20(2)                                            --------->bZIP60(1)                          <---------YAB1                                            --------->TGA1a                        <------NtERF2                                            <---------TGA1a            --------->ATHB12 --------->AHL20(2)                                            <---------O2    <---------MYB52(1)    ------>NtERF2     =================================================bZIP_DOF        <---------YAB1   <----------DOF2     ---------->DOF2                        --------->bZIP60(2) <<<<<<<<<<MYB80  <---------DEAR3(1) ---------ETT(2)                            <---------bZIP60(1)<------MYB46(1) --------->MYB52(1) -------->ETT(2)                    ---------->DOF2   <---------ANAC46--------->ICU4<---------ANAC46 -AHL20(2)                          ==================bZIP_DOF <------MYB83   ----------->HVH21   ggtcgacaaaagatgagacaatatgctgatgaagacataaaagacgacgtcgcgttgtgtctgtttggtttgatgattaaacgacggcgttttaattagg  18384100                                     --------->ANAC58                                     --------->ANAC58              --------->MYB52(1)  <---------REM1(2)                      <------MYB83      ----------->GT1        <----------DOF2                             <------MYB46(1)   <---------MYB52(1)       <---------ANAC58             <---------HSFB2a(2) <---------ANAC46           <---------ANAC58  *TSS       --------->HSFB2a(2) --ICU4  <-----------GT1<---------MYB52(1)    <------------CBF           <---------ANAC46           <   gcttcgtttagttacaaaacgacgcagtttgctttcttcacgctcatagattgaagtctcgcgaacagtcttgttgggttttgggttttgagagacagag  18384200                 <---------MYB52(1)                <-------GAMYB               <---------MYB46(3)                                              <---------ZAT6           --------->LBD16                                                 --------->ZAT18          <---------ANAC58                                                 <---------ZAT14          <---------ANAC46                                                 <---------SPL7          <---------ANAC58                      ----------->GT1           <---------ANAC46       <---          --------->HSFB2a(2)         <---------ARR14(2)                  --------->ANAC55(2)    ----         <---------LBD16              --------->ARR14(2)             <----------DOF2           <-----       <---------SPL7<---------ZAT6   ------->TEIL                  <---------ANAC58     <---------At4g35610      <---------ANAC58                <---------ARR11(1)            <---------ANAC58     --------->At4g35610      <---------ANAC58               <---------CCA1(2)     ---------->ID1 <---------ANAC58 <--------- ---------ARR14(2) --------->MYB52(2)<---------ARR14(1)<----------DOF2    <---------ANAC58 <---------DAG2   aggttttggcttccgggtcgttagtgtttgatcatcttcgtatctcagaagggtgaactttgttgttttggcttttgcgtactgttgaatcagcttttcc  18384300                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                            <--------        <---------ANAC58                                                                    <--------        <---------ANAC46                                                                    ---------   <------MYB83                                                                             <--------   <------MYB46(1)                                                 --------->At4g35610      <--------  <---------AtMYB61                             <----------DOF2    <---------At4g35610      <--------  --------->MYB59                           <------ZmHOX2a(1)    <---------ZAT18         --------->ARR14(2) ------TOE1(2)                 <---------ARR11(3)               <---------ANAC58         <---------ARR14(2) ----->LBD16           --------->ATHB12   <---------TOE2(3)     <---------ANAC58      --------->ZAT6 ------------AGL1     <---------YAB1--------->AHL20(2)          <---------ANAC46    <-----------GT1 -DOF2  <---------ANAC58       --------->ARR11(3)        <----------DOF2      <----------DOF2--------   aggtttggtttcgttttctggtttttgattagagaacttaaattaaggacctttaatcgttttatggtgtgcttccaattctttgttaacagttccgtga  18384400 --->ZAT14 ----ZAT14 ----ZAT18 ---MYB52(1)                  <---------TOE1(2) -ANAC58                      <---------TOE2(2)                  --------->At5g28300 -ANAC55(1)                   <---------TOE2(3)               <---------At4g35610 >ANAC55(2)              <---------ARR11(3)                   --------->ZAT2 -ANAC55(2)              --------->ARR11(3)                   --------->At4g35610                  <- -ANAC46                <---------CCA1(2)                     <---------ZAT2                       -- -ANAC58              --------->AHL20(2)                 --------->WOX13(1)       --------->At4g35610 ->LBD16          <---------YAB1                      --------->YAB1              <---------At4g35610   actcaattcatagagctagtctgattatatcttaggttttagtgaattagtctgaatattaatcagctgtgaattgaatgaaacagatgcctcgaagacc  18384500                                                           <----------DOF2                                                          <---------ANAC58                                                       <---------MYB52(1)                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                      <-------GAMYB                                                      --------->At5g28300                                                     ----------->GT1                       ----------                                          <---------At5g28300                     <---------ANAC58                                         <-----------GT1  <---------ANAC58        <---------ANAC46                  ---------->DOF2 <---------TOE2(3)<---------LBD16           <---------ANAC58     <------ZmHOX2a(1)  --------->At4g35610    --------->ARR14(2)    <----------DOF2 --------->ATHB12 --------ICU4 ----------->GT1    <-----------GT1  ------------>MYB.PH3(1)    <---------ANAC58 ------->YAB1 <---------ZAT6  <----------DOF2 <---------MYB52(1)<----------DOF2   <---------ANAC58 --   atcatcaggaagaagagtgttaaagcatcagcctttaacattttcaccgtttatgcggttactttcctttgcttcaatggctaggcgtgatttgtctcat  18384600  Previous    Next  AGI:  At2g44500.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15104.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 18381417    to: 18383866    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g44510.1    Description:  p21Cip1-binding protein-related. Identical to Protein BCCIP homolog [Arabidopsis Thaliana] (GB:O64885;GB:Q94AZ3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03830.1); similar to Os03g0853900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051933.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47571.1); contains domain PTHR13261 (PTHR13261) Range:  from: 18384146    to: 18386286    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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