Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->AtMYB61                         --------->ANAC58             <---------TOE2(3)                         --------->ANAC46       <---------AHL20(1)     <----------DOF2     --------->ANAC58       --------->AHL20(1)     <---------DAG2  <-----------HVH21          --------->AHL20(2)                        --------->TOE1(2) ----->ID1           <-----------TGA1          --------->AHL20(2)                         --------->TOE2(2) --GAMYB --------------->AtSPL8--------->TOE2(3)<---------AHL20(2)     <---------------AtSPL8 ------- -->MYB52(2)        --------->ANAC46       --------->AHL20(2)     --------->AHL20(1)     --------->MYB46(3) ---MYB46(3)---------->ID1  <---------ALFIN1   <---------AHL20(2) <---------AHL20(1)--------->YAB1   tgtcttacttttttgttccttctcgtcacaccacctcaaaaattttaaaataaattaagtttttgatatatattaagtacaaagaaacataaccagcgaa  18366400                                                                         ------->GAMYB                                                                        --------->MYB46(3)                                                                        <------------MYB.PH3(1)                                                                        <------------AtMYB77                                                              <-------TEIL                           --------->ANAC58                  <------ZmHOX2a(2)                    ------->GAMYB                           --------->ARR14(2)                   --------->MYB46(3)   ------->GAMYB       --------->AGP1      --------->ANAC46                 <-----------GT1     <-----------GT1        <---------ARR11(3)  --------->ANAC58    <---------TOE2(3)      --------->ANAC58                 <---------ARR14(2)  --------->ANAC58    < -->ZAT14 <---------YAB1   --------->ANAC46           <-----------GT1 <-----------GT1   ---------->DOF2   gtcgatgaggttatgtttctaaccatctcaagaaactaataaccctcaaaccaattttactagatccatttctaaccgtctcaagaaactaaaagccctc  18366500                                                                                   <---------TOE2(3)                                                           <---------ANAC46       --------->YAB1                                                           ----------->GT1        <---------ICU4                       ----------->GT1                     <------MYB83     --------->RAP2.6(2)                       <---------ANAC46                    <------MYB46(1)  ----------->RAV1(1)       <-----------------AGL1 --------->ANAC58             <---------ANAC55(2)   <---------ATHB51       <-----------------AG   --------->ANAC58            --------->MYB59--------->ANAC46      <-----------GT1----------->GT1      <---------ANAC55(2)          --------->At4g35610     ------ ---------ATHB12<------ZmHOX2a(1)         --------->ANAC55(2)          <---------At4g35610<----------DOF2   aaatcaattttcaatataggaaattgtgtaaaacgaaatggattaagtaatcttggttattaggtgaaatgttagcagccacaataatgtttcttttgtc  18366600                                                  ------>MYB46(1)                        ------->TEIL     <------MYB83   <---------ANAC58  --------->ANAC58    <------MYB46(1)   <---------ANAC58  --------->ANAC58   --------->MYB111(1)                            <---------ANAC46   <---------ANAC46 <---------------AtSPL3        ------>MYB83          ---------->DOF2<---------ANAC58 ---->ID1 <-----------GT1               --------->MYB59                <---------WRKY45<---------ANAC58   tcatagcgttttttactgaagacaagtacctctcacaaatagtaggtaaaccaaatttgaattacagaaatagtcaaagacattaactagcgtctataac  18366700                 <---------ARR14(2)                 --------->ARR14(2)                ------>MYB83       --------->TOE1(3)       --------->TOE2(3)     <---------ARR11(3)     --------->ARR11(3)                                                      ----------->TBP  <---------AHL20(2)                                                       <---------AHL20(2)      --  --------->AHL20(2)                          ---------->DOF2              --------->YAB1        ---- --------->AHL20(2)               --------->ALFIN1                         --------->AHL20(2)    ---- --------->YAB1 ------>MYB46(1)  --------->ALFIN1 <------ZmHOX2a(1)   ------------>CBF           ---- <---------AHL20(2)  --------->LBD16<---------ANAC46            <----------DOF2               -------   taattaaaatcttaaaccaaatccccaaacacagagttgggggtttctcaaaggataagaaaatgacttttcttcaattatatatagggccactaaaccc  18366800                                                                                    --------->YAB1                                                                                    <---------ICU4                                                                                   <---------YAB1                                  --------->ANAC46                               <---------ICU4                                  --------->ANAC58                               --------->YAB1                                  --------->ANAC58                              <---------YAB1                                 <---------TOE1(2)                            <---------ICU4     <---------YAB1       <---------DAG2                                      --------->YAB1 ------->MYB46(3)      <-----------GT1     ---------->DOF2                   <---------YAB1 ------->RAV1(1)  --------->YAB1------>ZmHOX2a(1)                          --------->YAB1    <------- -->MYB46(1) ------>ZmHOX2a(2) --------->TOE2(2)                          <---------YAB1     -------- -->MYB83    ==========================HOX2a_HOX2a                       <-----------GT1 --------->At4g35610 -->ANAC46*TSS ----------->GT1 --------->TOE1(2)                        --------->YAB1--------->At4g35610   aacaaatatacttgatccagttataaaacctttcctacgaaaactcaaagaaacaatggccatcaaatccatatttatcatcatcatcatcagcatcatc  18366900                                                                                                -----                                                                                                <----                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                          <---------ANAC46                                                                                          <------MYB83                                                                                         --------->MYB52(2)                                                                                         --------->MYB111(2)                                                                                         --------->MYB46(2)                                                                                         <---------MYB46(3)                                                                                         --------->MYB55(2)                              <---------TOE1(2)                                   <-----------GT1                           ------>ZmHOX2a(2)                                   <---------GLK1(2)<----                           <---------HSFB2a(1)                                 --------->ARR14(2)                           --------->HSFB2a(1)                                 <---------ARR11(3)                    <----------DOF2                                            --------->ARR11(3)                 <---------YAB1  <---------MYB52(1)                            --------->ARR14(3)     <---------ARR11(3)    <---------HSFC1(2)                                  <---------ARR14(3)     --------->ARR14(2)   <------ZmHOX2a(2)                               ------>ZmHOX2a(1)     -----     <---------ARR14(2)  --------->ARR14(2)                          <----------DOF2     <---------AtMYB61     --------->ARR11(3)  <---------ARR14(2)                         <---------ANAC58     --------->MYB111(1) --ICU4      <----------DOF2 ------>ZmHOX2a(1)                      <---------ANAC58   <---------MYB52(1) ->YAB1      <---------DAG2--------->HSFC1(2)             ---------->DOF2--------->TOE2(3)<------MYB46(1)   acatcaatatctgaactttatgctttggatccttcgtttcttcgtctttcgacctctctccaaagaagtagctttcctcaagattttcggtttggtgcag  18367000      <---------ANAC58      <---------ANAC58                                      --------->ZAT6 ---->At4g35610                                        --------->TOE1(3) -----At4g35610                                   <-----------GT1                                   - -----ZAT2   --------->At4g35610         <-----------GT1------>ZmHOX2a(1)                           < ---->ZAT2   ----------->GT1       <---------AHL20(2)  --------->TOE2(3)      --------->AHL20(2)<----   cttcgagtgcttatcaggtcaatttcattcttcttatttcatttaactggtttttctccttaactgtagtttagaatcaatttcatatagatttcgattt  18367100                      --------->TOE2(3)                 <---------MYB52(2)                 --------->MYB46(3)               --------->ARR14(2)              --------->ATERF1(1)                 <---------ARR14(2)               <----------DOF2             <---------At4g35610             ------->MYC3               --------->LBD16             --------->At4g35610             <-------MYC3              <-----------RAV1(2)             --------->ZAT2               --------->YAB1            <---------ARR14(2)           <------ZmHOX2a(1)            ------>MYB46(1)--------->DOF5.7(2)   --------->KAN4(2) -------->ZAT14 --------->At4g35610     ------>MYB83<-------TEIL    --------->ARR11(3)         ------ ---------ZAT14--------->RAP2.3(3)      --------->ANAC58            <---------ARR11(3)        ------- -----------AtSPL8 --------->MYB52(1)   --------->ANAC58            --------->ARR14(2)  <-----------GT1   agtacagagtgaaggagcagccaacgttgatggaagagaaccaagcatatgggatacgtttactaaacaatatccaggttattctcttttttactagcct  18367200                                        ------->TEIL                                       <---------CCA1(2)                                  <----------DOF2                  <---------AHL20(2)                                ------->TEIL                     <----------DOF2                            <---------TOE2(3)                 ------->TEIL          --------->CCA1(2)--------->MYB52(1)         <---------TOE1(3)                             - ----------->GT1           <---------DOF5.7(2)        <---------TOE2(3)                            << --->TOE2(3)            --------->At4g35610           --------->MYB59  <-----------GT1             << ---------->AG         <---------ARR11(3)  <----------DOF2   <---------CCA1(2)                     <-   tataggtgaaatatacaagaggcaagagctaacgtacttttgtatcttttgatatttaggtttgtatcttttatttcaatcccaacgttgtatttgatac  18367300  Previous    Next  AGI:  At2g44480.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT2G44450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67248.1); contains InterPro domain 6-phospho-beta-galactosidase, eukaryotic; (InterPro:IPR011580); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 18366810    to: 18370164    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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