Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->ICU4                                                       <---------YAB1                                              <---------ARR14(2)                                           --------->ANAC58                                           --------->ANAC55(1)                                           --------->ANAC46                                           --------->ANAC58<---------ICU4                                           <---------ANAC55(2)                                           --------->ANAC55(2)    <---------ATHB12                                          <---------LBD16 <---------YAB1          --------->ANAC58          <---------ZAT6   ------>ZmHOX2a(2)                              <          --------->ANAC58    <---------ARR11(3)   --------->ARR11(3)                        <-------      --------->YAB1          --------->ARR11(3)   <---------ARR11(3)                   <----------DOF2     <---------TOE2(3)       --------->REM1(1)--------->ARR14(2)--------->WOX13(1)      <---------DAG2   ggctgctatggtaagcaagagtacttcttctacatcttgtgttatacggaactgatcttcattattcaatcactgttgaatcgtgttgaacttttttaat  18226800                                                                      <------------CBF                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                                                                    --------->ARR11(3)                                                                    --------->AHL20(1)                                                                    <---------AHL20(1)                                                                    <---------ARR11(3)      ---------    <-------TEIL                                                 --------->YAB1        ----------->GT1 ---------TOE1(2)                              <---------ANAC46  --------->AHL20(2)  <------------CBF --AHL20(2)     ----------->GT1    <---------ZAT18        --------->WOX13(1) --------->ATHB12  ------   tctacgttcatttgtagtttgttatatggtgtttcagtcccctcttgaatcgtggataatcaatctataatatattgacttattgaatattgaaaaataa  18226900                                         <------------CBF                                          --                                  <------------CBF                     <---------ARR14(2)         ---                               ------------>CBF                        >>>>>>>>>GATA-3            <--                              --------->ANAC58                         >>>>>>>>>GATA-1            <--                              --------->ANAC58                         >>>>>>>>>GATA-4        -------                       <---------------AGL15                    <---------ZAT14            --------->CCA1(2)                       --------------->AGL15       <-----------GT1     >>>>>>>>>GATA-2     --------->GLK1(1) >YAB1--------->WOX13(1)    ---------->DOF2--------->AHL20(2)   --------->ZAT14           --------->ARR11(3) --->YAB1         <---------MYB52(2)  ------------>CBF  <---------CCA1(2)                 <---------ARR11(3)   tcaaagattaatcaaatgctactaactccattaagcaattgccaattgaatatttatcttatcttctacagtggattcaagttcaactagaagatatcaa  18227000           ----------->GT1       --------->AHL20(1)       --------->AHL20(2)                                                                 ---------->DOF2       <---------AHL20(1)                                                       <----------DOF2       <---------AHL20(2)                                                       <---------DAG2   <---------AHL20(2)                                                          <---------------AGL15   --------->AHL20(2)                                                        <---------AHL20(2)  --------->AHL20(2)  <---------ARR11(3)                                     <-----------GT1 ------->AHL20(2)     --------->ARR11(3)                                 --------->AHL20(2)       <-- ------>AHL20(1)      <---------GLK1(2)                          <---------AHL20(2)  <---------TOE2(3) -------ARR11(3)    <---------TOE2(3)              <-----------GT1       <---------AHL20(2)   ------- -------AHL20(1)    ----------->ARR10           ----------->GT1  --------->AHL20(2)  <---------TOE1(3) -->YAB1 <------------CBF          <---------GLK1(2)------------>CBF   <----------DOF2----------->GT1   aatatttaataaattgataaataagattttcaaactagaatttcgctaaatagttacaattttgtatataattctttaattacttttagggtaaaagctc  18227100                                                                                           --------->At4g35610                                                                                           <---------YAB1                                                                                         --------->YAB1                                                                                         <---------ICU4                                                                                        <---------YAB1                                                                                      --------->YAB1       <-----------GT1                                                                <---------ICU4   --------->AHL20(1)                                         --------->ETT(2)       <---------YAB1   <---------ARR11(3)                             --------->ANAC58              --------->bZIP60(1)  <---------CCA1(2)                               --------->ANAC58         --------->CCA1(2) -------ANAC46     <-----------GT1         --------->LBD16    <---------ETT(2)  <---------bZIP60(1) -->ARR11(3)   ----------->TBP <-----------GT1 <-----------------------TaNAC69(2)    --------->ICU4 -   tcgtatatattacacccatataaaccctagattaaacgttccatccgaagacacgaacacgatgacgaccgaagaagacatgaggtcatcatcatcagag  18227200                                  <---------MYB52(1)                             <---------TOE2(1)                             <---------TOE1(1)                             ----------->HVH21                            --------->SPL7                           --------->SPL1(1)                           <---------SPL1(1)                          --------->TOE1(2)                   --------->HSFB2a(2)                          <---------SPL7              <---------O2                        --------------->AtSPL3        --------->O2  --------->TOE1(2)                       <---------DOF5.7(2)            --------->TGA1a                       <---------At5g28300            <---------TGA1a                      <-----------GT1                 <---------ANAC58                      ------------------>SPL14        <---------ANAC58    <------ZmHOX2a(2)                     --------->DOF5.7(2)              <---------ANAC46   --------->ARR14(2) ---------                <-----------RAV1(1)            <---------MYB52(1)  --------->DEAR3(2)       <-------- -------->ATERF1(1)<---------MYB46(3)      <---------At4g35610<---------HSFB2a(2)          <---------CCA1(2)   tcgtctcccaagtcgtttctgtcgttaccgtacgacgttgttttcaactgtttgtctcgtgtctcgagaacccacgatccaattctctctctcgtatcca  18227300                              <---------HSFB2a(2)                              --------->HSFB2a(2)                             ------>ZmHOX2a(2)                       <---------ANAC58     <---------ARR14(2)                       <---------AtLEC2     --------->ARR14(2)                   <----------DOF2      --------->SPL7------>ZmHOX2a(1)        ==============HOX2a_HOX2a     <---------SPL7 --------->TOE2(3)        --------->ZAT14<---------ANAC58--------->MYB52(1)        <------ZmHOX2a(2)    ================================HOX2a_HOX2a                       ------      --------->At4g35610  --------->ARR11(3)   --------->LBD16                          --------->TOE1(3)      <---------At4g35610  <---------ARR11(3) <---------LBD16                    <---------At4g35610 >ARR14(2)     =====================HOX2a_HOX2a<---------ANAC55(2)   ------>MYB83--------->At4g35610 -ARR14(2)     ------>ZmHOX2a(1)    --------------->AtSPL3           ------>MYB46(1)     --------->TOE2(3)   agagtttcagatcactcctcgctttgcctgatctcgaagccgaacgattccgcatcctaaaaaacgagacctgcctctatgtctgcttaaacctgaataa  18227400                                                                                        <---------ALFIN1                 --------->ZAT2                                                         --------->ANAC46                 --------->STY1(2)                                                    <---------ALFIN1             --------->TOE1(3)                                                      --------->CCA1(2)       ------->GAMYB                                                                <------ZmHOX2a(2)       --------->TOE1(3)                                                           --------->ARR14(2)       --------->TOE2(3)                                                           <---------ARR11(3)     -------->P  <---------STY1(2)                                                 --------->AGP1    ------->GAMYB<---------ZAT2                                            ------>ZmHOX2a(1)   <---------MYB55(2)                                                      ================HOX2a_HOX2a   <---------MYB111(2)                                                    <---------ANAC58   --------->MYB46(3)  <-------TEIL           --------->YAB1              <---------ANAC58 --->YAB1   --------->ZAT6                ------>ZmHOX2a(1)--------->AtMYB61       <---------ARR14(2)   caacaacaaccctaaccctagctggttcatactctctcaaactcctaaacataaactgataccactcccttctcttccttacccagatccacatcccaat  18227500                                    <---------ANAC58                                    <---------ANAC58                                   --------->ZAT2                             ------>ZmHOX2a(2)                            --------->CCA1(2)                            <------ZmHOX2a(2)                           --------->AGP1                           --------->ARR14(2)                           >>>>>>>>>GATA-1                           >>>>>>>>>GATA-4  --------->ARR14(2)                           <---------ARR14(2)        ---------->DOF2                           >>>>>>>>>GATA-3  <---------ARR14(2)                           >>>>>>>>>GATA-2  <---------GLK1(2)                        --------->HSFB2a(2)                           --------->ARR11(3)    ---------->ID1        <------ZmHOX2a(1)                           <---------ARR11(3) <-------TEIL          <-----------RAV1(2)   -----------     <-----------RAV1(1)  --------->GLK1(1)<------NtERF2   ---------->DOF2 <---------At4g35610   tgctcaactgttgtctcaactggttcagagatctacttgctgggcggattcgtcgcaaaggaaaagagaagcaggagagcttatgttctcgattgtaaat  18227600                                                              --------->MYB52(1)            <---------ATERF1(1)                              ----------->HVH21           --------->DEAR3(1)                               <---------WOX13(1)   --------->SPL7           --------->WRKY38(1)                            --------->ATHB12       <---------LBD16 <---          <------NtERF2                          --------->RAP2.3(2)        <------------------SPL14          --------->ATERF1(1)         ---------->DOF2    <---------YAB1 <------ZmHOX2a(2)    --------        <---------ANAC46  <---------ANAC46       --------->RAP2.6(2)    ======================HOX2a_HOX2a        <---------ANAC58  <---------ANAC55(2)   --------->RAP2.3(1)    <---------ARR11(3)    <-------        <---------ANAC58  <---------ANAC58     <---------At4g35610     --------->ARR11(3)    <------- <---------YAB1           <---------ANAC58     --------->At4g35610--------->At5g28300  <------ZmHOX2a(1) >GT1  <-----------------------TaNAC69(2)   --------->At4g35610<---------------------WRI1    --------   ctcatcaatggcgtcgactccctaaaatgcgtatagctcgaaaagaagcagccgctaatgtgattgacggtaagatcaatgtgtacggaggatgcagcag  18227700  Previous    Next  AGI:  At2g44030.1    Description:  kelch repeat-containing F-box family protein. Identical to Putative F-box/Kelch-repeat protein At2g44030 [Arabidopsis Thaliana] (GB:O80573); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G46050.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 18227162    to: 18228304    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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