Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------------->AtSPL8             --------->ANAC58                                             <---------ZAT2                        --------->ANAC58                                             <---------At4g35610              --------->At4g35610                                             --------->At4g35610     --------->ANAC58                                             --------->ZAT2          --------->AtLEC2    --------->ANAC58                      ---------->DOF2           --------->WOX13(1)    --------->ANAC58                    --------->ANAC58    <----------DOF2   <---------At4g35610  <------ZmHOX2a(1)                     --------->ANAC58    <---------DAG2   --------->GLK1(2) -ZAT14                             --------->YAB1       <-----------GT1---------->DOF2 >ZAT14        ---------->DOF2   <---------------AGL15<----------DOF2--------->ANAC58   agcaggaagcaaaaactcaaagaacaaaatggcttcaataacaagaaagctgagtactttaactttatatcaagcaaagaagctgaagcaagtttgattt  18204400                ---------->DOF2                      --------->MYB46(3)              <---------AHL20(2)                   --------->HSFB2a(2)             --------->AHL20(2)                    <---------HSFB2a(2)             ---------->DOF2            <---------YAB1                      --------->ARR14(2)       ------>NtERF2     --------->WRKY38(1) ---------->DOF2        <---------ARR14(2)  <---------GLK1(1)<---------MYB52(2)  --------->ALFIN1  <----------ID1          <-------TEIL    <------ZmHOX2a(1)<---------MYB52(1)   tcaagtgttgacttattaaaaagagacaaaagagtattgaagaacatacagttccacaaccaggaactagagctctgccattaggcaaagaaccagtctc  18204500                                                                             --------->TOE2(3)                --------->LBD16                                              --------->AtMYB61              <---------LBD16                                             <---------ALFIN1             --------->MYB52(1)                                           ------->GAMYB           --------->MYB46(3)                                            --------->MYB46(3)       --------->LBD16  <<<<<<<<<MYB2                                    <---------MYB55(2)      --------->ANAC55(2)    --------->TOE2(3)                           <---------MYB111(2)      --------->ANAC58<------MYB83                                      -------->P      --------->ANAC58<------MYB46(1)                                   ------>MYB46(1)   --------->ANAC46     <-------TEIL    <---------AtMYB61             ------>ZmHOX2a(1)    ------>MYB83      --------->ANAC55(2) ----------->ARR10  <--------P------>ZmHOX2a(1)  ----------->RAV1(2)   --------->ANAC46 <-----------GT1   gacgagatgcgcaataaccggagttggttttcctaagtcccatggagttgctcctgcttcccaactcttctcccaaccacctaaaccatttcacataatg  18204600                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                               ======================                             ------>ZmHOX2a(2)                                 --------->MYB52(1) ---                            --------->At4g35610           --------->HSFB2a(2)  -------->P     -------       ----------->GT1      <---------At4g35610           <---------HSFB2a(2)--------->MYB46(3)<-----     ---------->DOF2       <---------AGP1         ---------->ID1 <---------GLK1(1)        <---------AHL20(2)   cttcagagaaagaaaaaaaaaaaactattgatctgagaaatttttgggatttgttgtttaccagaagaattctcgctcatcaaccggtggaataaatcac  18204700                       <---------LBD16             =================bZIP_DOF             =============================================MYC_MYB             <---------ANAC58             <---------bZIP60(2)             <---------REM1(1)                       --------->ANAC58             <---------bZIP60(1)                     --------->ANAC58             <---------ANAC46                     ------->GAMYB             <---------ANAC55(2)                 --------->ANAC58             --------->ANAC55(2)                 --------->ANAC46             <---------ANAC58                    --------->ANAC58             ========================================MYC_MYB             --------->bZIP60(1)                ------>MYB46(1)             --------->O2                       ------>MYB83             <---------O2                      --------->MYB52(1)          ----------->TGA1                    ------->GAMYB  --------->ATHB12   <---------WRKY18(1)      --------->AtMYB61 ---->ANAC46 <---------TGA1a                 --------->MYB46(3) ---->ANAC55(2)    <---------DAG2            <---------MYB55(2) ---->O2<---------ANAC58                     <---------MYB52(2)              ----------->GT1 -----ANAC55(2)    <----------DOF2          -------->P                     ----------->GT1 -----O2<---------ANAC58 --------->LBD16    --------->ANAC58           ---------->DOF2 ======================MYC_MYB              --------->ANAC58   *TSS------>NtERF2 -------->HVH21 ------->TEIL             <------ZmHOX2a(2)     ----------->HVH21 -->MYB52(1)----------->STF1        <---------------------WRI1 --------->DEAR3(1)                 --- ----LBD16----------->HVH21<---------ANAC46--------->WOX13(1) --------->At4g35610            <-------   gggacgattggagtgacgtagctttaccggcgttttccatcggatcaaccaacgcaaacaaatcagcgacgactaaagagtgaaaaaatgtttctgcgta  18204800                                ---------->DOF2                               <---------AHL20(2)                           <---------YAB1                    --------->LBD16                          <---------AHL20(1)               <---------LBD16                          <---------AHL20(2)              -------->P                          --------->AHL20(1)              --------->MYB52(1)                   ------                          --------->AHL20(2)          --------->GLK1(2)                       -------        ---------->DOF2  --------->AHL20(2)           <---------ARR14(2)                    <--------       --------->YAB1    --------->YAB1               ---------->TaMYB80                    ---------      <---------ATHB12  <---------YAB1                --------->ARR14(2)                  --------->ZAT14 ------->DOF2       <----------DOF2           <---------AHL20(2)<---------At4g35610       --------->ZAT18 --ANAC46           <---------DAG2           <---------AHL20(2) --------->At4g35610       <---------ZAT14   gaaagctaatcaaagttttgtgctttattatattaaaagtcatattttttaatgggaatctaccggagctaaattgttttgttacagagatgtgaactga  18204900                                                                              <---------ANAC46                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                          <-------GAMYB                                                                        <---------TOE2(3)                                                                        <---------YAB1                                                                  <---------AHL20(2)     <---------MYB46(3)                                           <---------YAB1                    < --->MYB52(1)            <---------AHL20(2)                      --------->AHL20(2)             <---- ---->HVH21              --------->AHL20(2)                      <---------AHL20(1)           ------- -At4g35610             --------->YAB1       --------->YAB1      --------->AHL20(1)       <---------AHL20(2) >At4g35610          ------>ZmHOX2a(1)<---------ANAC46    ---------->DOF2<---------MYB46(3)  <-------   cgaatagtagttgagaaataatcctataaaaatagcactgatgtgtatcaaaatttagacaaaagaatataattgtggttgtgtgtgtttgtttaatcaa  18205000    <---------ICU4 --------->YAB1                <---------MYB52(1)                                                  -- -------TEIL         <---------ARR11(3)                                                           <-- -----YAB1           <-----------ARR10                                               ----------->GT1 -->YAB1             --------->ARR11(3)            ---------->DOF2        <---------TOE2(3)      <--- --ATHB12        <------ZmHOX2a(1)          ----------->GT1          --------->WOX13(1)     ---------   gattcataatttacaaggaggattatcttctctgttttgtaacgagaagaaaataaagagtgaatgtgaatcaatcgaggtagaagagagtgacaatctt  18205100           <---------ANAC58           <---------ANAC58   <---------ARR14(2)   --------->ARR11(3)   --------->ARR14(2)                                         <------ZmHOX2a(2)   <---------GLK1(2)                               --------->ANAC58   <---------ARR11(3)                              --------->ANAC58 ----------->ARR10                            <---------YAB1 --------->ARR11(3) ------->LBD16                            <-----------HVH21  <---------ARR11(3) -------ANAC46                     <---------HSFC1(2)       <---------At4g35610                  ---- ------LBD16    ----------->HVH21  --------->HSFC1(2)       --------->At4g35610                <----- >GLK1(2) ---------->ID1           --------->At4g35610   <---------At4g35610     --------->CCA1(2)   gcgcagatttttggcttcttgacatgtctccataagaagcttactgtcatgaaacgcgaagcagatcacttgttgaacttgtgatatgatgtccatatta  18205200                              <---------TOE2(3)                                                 <<<<<                            <---------ATHB12                                                   <-----                        --------->MYB46(3)                                                 <---------ANAC58                      <<<<<<<<<GT-1                                                        <---------ANAC46                 --------->AHL20(1)                                                      ------>NtERF2                 <---------AHL20(1)                                                   --------->ZAT2               <---------AHL20(1)      --------->GLK1(2)                              <---------ZAT2  ----------->RAV1(2) <-----------GT1 <---------GLK1(2)----------->GT1                --------->At4g35610 ----->ANAC46  --------->AHL20(1)    <---------At4g35610                     <-----------GT1   ------ ------GT1    --------->AHL20(2)  <-------TEIL      ---------->DOF2     <---------AHL20(2) <---------ANAC58   cacaacctgcacataaatatatattaaccaatgaggttcagattccatcttcaccaaaggtatatcaatggttttttattcacaaacctgctggcttcta  18205300  Previous    Next  AGI:  At2g43940.1    Description:  thiol methyltransferase, putative. similar to thiol methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT2G43910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46360.1); contains InterPro domain Thiopurine S-methyltransferase; (InterPro:IPR008854) Range:  from: 18203029    to: 18204763    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g43945.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G59870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60471.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176) Range:  from: 18204920    to: 18207270    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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