Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------ICU4                                                                     --------->ICU4          --------            --------->AHL20(2)                                       <---------YAB1        <---------AHL20(2)      ------->GAMYB                                                --------->YAB1      --------->AHL20(2) -------->ANAC55(2)                                              ------>MYB46(1)      <---------AHL20(1) -------->ANAC46   <----------DOF2     --------->ZAT6            ------>MYB83         --------->AHL20(1) -------->YAB1  <-----------GT1    <-----------HVH21           <---------MYB59       --------->AHL20(2) ------TEIL ----------->TBP  <-----------HVH21                 <---------MYB46(2)  --------->AHL20(2)   atacataaccacatatatatactttgccttaggtcacagtcacactagccctaatatcacaaataccaaacataattaagcccaaaaatatatataaaag  18111800                                                                                             <-------                                                                                             ========                                                                                             --------                                                                                             --------                                                                                         <---------AHL20(2)                                                                                 <----------DOF2                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                           --------->GLK1(1)                 --------->GLK1(1)                                           <---------GLK1(1)                 <---------GLK1(1)                                         <------ZmHOX2a(1)        --------------->AGL15  --------->AHL20(2)                                     ---------->DOF2              <---------------AGL15<----------DOF2                               ---------->DOF2                    =================================== -->DOF2                   --------->GLK1(1)       <---------ATHB12        <------ZmHOX2a(1)<--------   gcccaattgtttcaaaattggtatgtctgatttcaaagtgaaaggatttctaaatcatccagatttaacttatagtaggaaatctttttcttttattatt  18111900                                                               <----------DOF2                                                            --------->ARR11(3)                                                            <---------ARR11(3)                                          <-----------GT1  <---------GLK1(1)                               <---------ICU4              --------->GLK1(1) --------AGL15                 <---------AHL20(2)       --------->ANAC58 ============================================================MADS_MADS ->AHL20(2)                   --------->AHL20(2)        --------->ANAC58           <-----------GT1 ------->AGL15           <---------ANAC55(2) --------------->AGL15                --------->CCA1(1) ========MADS_MADS       --------->ANAC55(2) ======================================================== -YAB1           <----------DOF2   <-------TEIL     --------->YAB1  <---------TOE2(3)               -   tatagtagggaatcgttttcttttatcacttaataaatacatttttatctcttatagtaagaaatcttttaagaattttgagaaatatccattctactgt  18112000                                   <---------ICU4                                   -------->HAHB4                                   --------->YAB1                                  --------->ICU4                                --------->YAB1                                <---------ICU4                               <---------YAB1                            <---------GLK1(2)                               --------->ICU4                            --------->ARR14(2)                             --------->YAB1                              <---------ARR14(2)                             <---------ICU4                       <---------AHL20(1)             <---                          --------->YAB1                          --------->ARR11(3)             ----                        --------->AHL20(2)                        <---------ARR11(3)           ------                      --------------->AGL15                       --------->AHL20(1)          <------  <---------AHL20(2)  <----------DOF2     <----------DOF2        --------->AHL20(2)         --------- =====================================MADS_MADS              --------->AHL20(2)    <---------AHL20(2) -------->ANAC55(2)<---------ARR11(3)   ------->TEIL         <---------AHL20(2)    --------->AHL20(2)   atatgtaatttgttgatacaatttcttttaataataataatgaacttttgcaaaatttgacaaataaatatatcagatactaaatataaatattcaatca  18112100     <----------DOF2 ------ANAC55(2) ----->ANAC55(2)    --------->ARR11(3)                                         <-----------TBP --->YAB1<---------AHL20(2)<---------AHL20(2)                     ----------->GT1              <----- ---ATHB12          <---------ARR11(3)                           ------>ZmHOX2a(2)     ---------->DOF2 >WOX13(1)    ----------->GT1  <-----------GT1          ----------->TBP<-----------GT1 ==============   cataatgctttttattttgtaatatctatattatttctctctctctctctctccctgtatatatagatcggtttaacctagttttatagcaaagctgtag  18112200                 <---------ICU4          =========================bZIP_DOF          <---------TGA1a          =========================bZIP_DOF          <---------O2          --------->ANAC58                                                                     ------          --------->O2                                                                         <-----          --------->TGA1a                                                                   <--------          --------->ANAC58                                                                --------->YAB1    <-----------HVH21                                                                     <---------ICU4   =================bZIP_DOF                                                           --------->YAB1   <----------DOF2      ---------->DOF2           <---------ICU4                      <---------YAB1  *TSS    --------->ANAC46                       <---------YAB1                     --------->YAB1 ----ETT(2)<-----------HVH21                   --------->YAB1                 --------->YAB1--------- ===================bZIP_DOF            <----------DOF2               <-----------RAV1(2)--------->ICU4   acgagctttcagacgtcaaacatggctaaagcacaaatatgtctttgtttcatcattttcttatacctctggccaggtaatcacaactataatcatgatg  18112300             --------->ATHB12            <---------YAB1            <---------AHL20(2)                                            <---------AHL20(2)           <---------AHL20(1)                                      --------->TOE2(3)     --------->YAB1                                             --------->YAB1   ----------->GT1                                           --------->YAB1  <---------ICU4                                            --------->AHL20(2)       <----------DOF2 --------->ICU4<---------WOX13(1)                           <---------AHL20(2)      <---------ICU4 ----->GT1 --------->AHL20(1)          --------->ANAC55(2) --------->AHL20(2) --------->YAB1 ----YAB1  <---------AHL20(2)         <---------LBD16  <------ZmHOX2a(2)  --------->AHL20(2) -YAB1     --------->AHL20(2) <-------TEIL            <---------ARR11(3) <---------AHL20(2)      ---- >ICU4    <---------------AGL15   <-------TEIL        --------->ARR11(3)--------->YAB1           <---   ttaattagtataatataattggtatgtagcgatgcatacatacgggtttatatatagatcatttaataatcttatattaattgtaatcttttccaagtac  18112400                                                                  <---------REM1(1)                                                                --------->At4g35610                                                 ---------->DOF2<---------At4g35610                                     ----------->GT1       --------->ANAC46 ------->GT1                    --------->HSFB2a(2)        --------->ANAC58                      ---- ------ZAT6 <-------TEIL        <---------HSFB2a(2)        --------->ANAC58           <-----------GT1   tgtaacaatttagtttcatttccatgtttctcttacagaaggaaatttcatcaaagtcaccaaggcagatgtaagaacataagtgaaataaccaagttat  18112500                                                                                             <-------GAMYB                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                    ---------->DOF2     <------MYB83                                                                    <---------At5g28300 <------MYB46(1)                                     <---------ANAC46         <----------DOF2    <------NtERF2                     <----------DOF2 <---------ANAC58        ------>ZmHOX2a(2)   --------->LBD16                   ---------->ID1    <---------ANAC58      <---------ARR11(3)  <---------LBD16           --------->KAN4(2)     <----------DOF2 <----------DOF2   <-----------GT1<------NtERF2 ----->AHL20(2)<----------DOF2 ---------->ID1  ------->TEIL--------->ARR11(3) ------>NtERF2<-------TEIL   aaaatgttttgtttattctttttctttttttttgtcttttcttgtaatgaactttgggtttgatctttgttacagcgctcggccggagattggtgcgttg  18112600                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                       <---------AtLEC2                                               --------->ALFIN1                   --------->ALFIN1                                              <---------TOE1(2)                  <------ZmHOX2a(1)                                             <---------ANAC46             <---------LBD16 -ANAC58          ---------->DOF2            <---------ANAC58          --------->ARR11(3)       <---- -ANAC58<---------LBD16                      --------->ANAC55(2)    <---------GLK1(2)--------->ALFIN1 >MYB52(2)    --------->MYB52(1)             <---------ANAC58      <---------At4g35610<-------TEIL   ctaaaccttctacggataacgaaaggcttcaagaaaacataaacttcgcgtgttcgaaaatcgattgtcagattatctcggaaggaggtgcatgttattt  18112700  Previous    Next  AGI:  At2g43670.1    Description:  glycosyl hydrolase family protein 17. similar to glycosyl hydrolase family protein 17 [Arabidopsis thaliana] (TAIR:AT1G78520.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67524.1); contains InterPro domain X8 (InterPro:IPR012946) Range:  from: 18112202    to: 18113120    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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