Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------MYB52(1)                                                       ------->GAMYB                                                     ------>MYB83                                                     ------>MYB46(1)                                                   --------->MYB46(3)                                                   --------->AtMYB61                                  <-----------RAV1(2)-------->P                               ----------->HVH21--------->ANAC58          ---------->DOF2         <--      --------->ARR11(3)     <---------ANAC58   --------->ANAC46     --------------->AGL15  ---------      <---------ARR11(3)     <---------ANAC58   --------->ANAC58     ----------->RAV1(1) ----------->GT1 -->MYC3                     <---------ANAC46 --------->ANAC58       <---------------AGL15<------ZmHOX2a(1) ---MYC3 <----------DOF2  <---------DEAR3(1)  <---------ALFIN1       ================================ --->ANAC46               ------>ZmHOX2a(2)   --------->ANAC58      --------->REM1(1) ---------->DOF2   ttgtttaagttctttacaagttgtttgatcggcgtgccaggcttagccacacaccaactcccttggccctacaacatagagcaaactcaaaaggatataa  18111300                                                                     <---------ANAC58                                                  <XXXXXXXXXXXXXXXXXXXXMIR844 --------->WRKY38(1)                                              <----------DOF2        <---------ANAC46                     <---------ANAC58         <---------------AGL15  <---------ANAC58        --------->ICU4                        --------------->AGL15 --------->ABI4(2)        <---------YAB1      <----------DOF2<---------ARR11(3)       <---------MYB46(3)           ----      --------->YAB1 <---------ANAC58    --------->DOF5.7(2)      <---------MYB52(1)       --------->HSFC1(2) ---------GT1--------->ATHB12            <---------MYB52(1)   --------->MYB52(1)     --------->YAB1 < >CCA1(2)   <-------TEIL    --------------------->WRI1--------->At4g35610  <---------AtLEC2<---------HSFC1(2) =============================================================MADS_MADS   --------->ZAT18 ------->TEIL   aaaccatatgatgattcattgttgtttgctcttttttagtttcgttatcttttatgagcagtcttaccggtgcttgtgcattgactctcatgaaacttcc  18111400                                    ---------->DOF2                 ---------->DOF2                                --------->ZAT6                    <---------MYB52(2)                              <-----------GT1                 <---------ATHB12                      <---------ARR11(3)                     --------->ANAC58                      --------->ARR11(3)                     --------->ANAC58                    ---- -->ZmHOX2a(1)      <---------AHL20(2)                     --------->MYB46(3)   <---------ARR11(3) ---------ZAT6     --------->AHL20(2)        ----------->GT1--------->WOX13(1)  --------->ARR11(3)   tactgtaagagaaacatagaaataaatctttttaacaataaagaacatggaaacaaatctaacaatcaactaaagacttgaagataatattctaaaatcc  18111500                  <---------YAB1              <---------YAB1          --------->YAB1            --------->YAB1         --------->YAB1              --------->ANAC55(2)           <---------ATHB12       <---------ATHB12             <---------ANAC55(2)         --------->WOX13(1)     --------->WOX13(1)    <-------GAMYB       <-------TEIL      <-----------GT1<---------WOX13(1)              <---------MYB46(3)--------->At4g35610---------->DOF2 ------->RAV1(1)--------->YAB1<-------TEIL  --------->YAB1     ----------->RAV1(2)      <---------YAB1   cacatatataacaatcaatattgatagatagattcaatcaacataatcaaactgatggttagattacctgatgagatgcataacaagatgatgaaaggaa  18111600                                                                          <---------ANAC58                                                               <---------HSFB2a(2)                                                   --------->ZAT18        <---------ANAC58                                               <---------GLK1(2)          <---------ANAC46                                               <---------ICU4  --------->HSFB2a(2)                  -                   <---------ARR14(2)         --------->ICU4   --------->HSFC1(1)                   -                   --------->ARR14(2)  --------------------->WRI1       <---------ANAC46            -          <----------DOF2              <----------DOF2      --------->GLK1(2)<-------GAMYB         <-  --------->ARR14(2)   <------------------------ANAC81    *TSS <---------HSFC1(1)     --------->MYB52(1)   accatatttgtgctttaggcatatttgtttttgtttgatgtctttgtcagaattgcacaaaaattctagaaattttgtgtgttgatataaacggctatac  18111700                                                                      <---------ICU4                                                                     <---------YAB1          --------            --------->AHL20(2)                                       --------->ICU4        <---------AHL20(2)      ------->GAMYB                                                --------->YAB1      --------->AHL20(2) -------->ANAC55(2)                                              ------>MYB83         --------->AHL20(1) -------->YAB1     <----------DOF2     --------->ZAT6            ------>MYB46(1)      <---------AHL20(1) -------->ANAC46<-----------GT1    <-----------HVH21           <---------MYB59       --------->AHL20(2) ------TEIL ----------->TBP  <-----------HVH21                 <---------MYB46(2)  --------->AHL20(2)   atacataaccacatatatatactttgccttaggtcacagtcacactagccctaatatcacaaataccaaacataattaagcccaaaaatatatataaaag  18111800                                                                                             <-------                                                                                             --------                                                                                             ========                                                                                             --------                                                                                         <---------AHL20(2)                                                                                 <----------DOF2                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                           --------->GLK1(1)                 <---------GLK1(1)                                           <---------GLK1(1)                 --------->GLK1(1)                                         <------ZmHOX2a(1)        ===================================                                     ---------->DOF2              --------------->AGL15  --------->AHL20(2)                               ---------->DOF2                    <---------------AGL15<----------DOF2 -->DOF2                   --------->GLK1(1)       <---------ATHB12        <------ZmHOX2a(1)<--------   gcccaattgtttcaaaattggtatgtctgatttcaaagtgaaaggatttctaaatcatccagatttaacttatagtaggaaatctttttcttttattatt  18111900                                                               <----------DOF2                                                            <---------ARR11(3)                                                            --------->ARR11(3)                                          <-----------GT1  --------->GLK1(1)                               <---------AHL20(2)          <---------GLK1(1) --------AGL15                 <---------ICU4           --------->ANAC58 ------->AGL15                --------->AHL20(2)        --------->ANAC58 ============================================================MADS_MADS             <-----------GT1 ->AHL20(2)              <---------ANAC55(2) --------------->AGL15                --------->CCA1(1) ========MADS_MADS       --------->ANAC55(2) ======================================================== -YAB1           <----------DOF2   <-------TEIL     --------->YAB1  <---------TOE2(3)               -   tatagtagggaatcgttttcttttatcacttaataaatacatttttatctcttatagtaagaaatcttttaagaattttgagaaatatccattctactgt  18112000                                   --------->YAB1                                   -------->HAHB4                                   <---------ICU4                                  --------->ICU4                                <---------ICU4                                --------->YAB1                               <---------YAB1                            <---------GLK1(2)                               --------->ICU4                            <---------ARR14(2)                             --------->YAB1                              --------->ARR14(2)                             <---------ICU4                       <---------ARR11(3)             <---                          --------->YAB1                          --------->AHL20(1)             ----                        --------->AHL20(2)                        --------->ARR11(3)           ------                      <----------DOF2     <----------DOF2         <---------AHL20(1)          <------  <---------AHL20(2)  --------------->AGL15                      --------->AHL20(2)         --------- =====================================MADS_MADS              <---------AHL20(2)    --------->AHL20(2) -------->ANAC55(2)<---------ARR11(3)   ------->TEIL         --------->AHL20(2)    <---------AHL20(2)   atatgtaatttgttgatacaatttcttttaataataataatgaacttttgcaaaatttgacaaataaatatatcagatactaaatataaatattcaatca  18112100     <----------DOF2 ------ANAC55(2) ----->ANAC55(2)    --------->ARR11(3)                                         <-----------TBP --->YAB1<---------AHL20(2)<---------AHL20(2)                     ----------->GT1              <----- ---ATHB12          <---------ARR11(3)                           ------>ZmHOX2a(2)     ============== >WOX13(1)    ----------->GT1  <-----------GT1          ----------->TBP<-----------GT1 ---------->DOF2   cataatgctttttattttgtaatatctatattatttctctctctctctctctccctgtatatatagatcggtttaacctagttttatagcaaagctgtag  18112200  Previous    Next  AGI:  At2g43660.1    Description:  glycosyl hydrolase family protein 17. similar to glycosyl hydrolase family protein 17 [Arabidopsis thaliana] (TAIR:AT2G43670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67524.1); contains InterPro domain X8 (InterPro:IPR012946) Range:  from: 18110829    to: 18111658    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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