Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   --                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                   --------->YAB1                                <---                                                  <-------TEIL                                   <---                                                <---------GLK1(2)                     --------->ANAC58                                                --------->ARR14(2)                    --------->ANAC58                                             <---------HSFB2a(2)             <------NtERF2       <---                                   <---------ARR11(3)                       --------->RAP2.6(2) <----    <-------TEIL                   --------->ARR11(3)                     --------->RAP2.6(3) ------- -------TEIL                   ---------->DOF2  <---------ARR14(2)       --------->MYB52(1)  -------- ------->AtLEC2         ----------->GT1      --------->HSFB2a(2)    ----------->RAV1(1) <----------CDC5   catgcattcatgtagtagaactagaagggtttataaagaacttacttccagattcatgagaaaactgagccaacatagcggcaatctcacgcttagcgac  18101700                                     ---------->DOF2                               <---------RAP2.6(3)                               --------->LBD16                              --------->ANAC58             <------NtERF2    --------->RAP2.6(2)            <-----------HVH21 --------->ANAC46   <----------DOF2            --------->RRTF1(2) <-----------------AGL1       --------->RAP2.3(2) --------ARR14(2)           --------->ZAT2 ------->ARR14(2)           <------NtERF2----------->RAV1(2) ----->HSFC1(2)             <---------ATERF1(1) ------HSFC1(2)             <---------ZAT2    <---------ANAC58 ----->HSFB2a(1)            <---------At4g35610 ------MYB46(3)             --------->At4g35610             <----------DOF2 ------DEAR3(2)            <---------ATERF1(1)<---------ANAC46 ------HSFB2a(1)   --------->ATHB12 --------->YAB1 --------->ZAT14                          <-------- -----DEAR3(1)   <---------TOE1(2) <---------ATHB12<---------ZAT14                  <----------DOF2 ----->AtMYB77 <---------SPL7 --------->ANAC58<---------ANAC58               --------->ARR14(2) --->HVH21 <---------DEAR3(1)--------->RAP2.3(1)  --------->ALFIN1           <---------ARR14(2)   ggttcctttataggcgtcgaacgattgggcagccgcaatgaaagcctggcgagtgtagaaccctttcgctggacagccatttccgactttgctcatgata  18101800                                                                                 <---------MYB46(3)                                                                                 <------MYB83                                                                                --------->MYB55(2)                                                                                <---------AtMYB61                                                                                --------->MYB111(2)                                                                                <---------MYB46(3)                                                                                --------->MYB111(1)                                                                            <------ZmHOX2a(1)  <-----                                                                   --------->AtMYB61          -------                                                                   <---------ALFIN1           <------                                                    --------->REM1(2)   <---------MYB52(1)  ---------                   --------->bZIP60(1)       <------ZmHOX2a(2)     --------->DEAR3(1)     <------MYB83                   <---------bZIP60(1)      --------->ARR14(2)    --------->MYB46(3)      <------MYB46(1)                ----------->HVH21           <---------ARR14(2) <---------ZAT14  --------->ALFIN1              <---------ANAC58             <------ZmHOX2a(1)  <---------ATERF1(1)<------MYB46(1)<---- -YAB1        <---------ANAC58<XXXXXXXXXXXXXXXXXXXXMIR2111B*----------->RAV1(2)<--------P<---------AtMYB61   ccatcaaaaaatgctggtgtgacaacattttcaattgtatcacgaggatcagcgtttagaccgcctgcaccaccgctaggagttggtgggataggtgtgg  18101900    <---------ZAT2                                                                                <--    --------->At4g35610                                                                           <--    --------->ZAT2                                          <---------ARR11(3)                   ----    <---------At4g35610                              <------NtERF2                           <-------   --------->ARR14(2)       --------->LBD16      <---------ANAC58                            --------   <---------ARR14(2)      --------->ANAC46      <---------ANAC58 <---------ARR14(2)      <---------ALFIN1  <------ZmHOX2a(1)     ------>NtERF2           --------->ALFIN1  <-----------ARR10      <---------At4g35610 ----MYB46(3)          <---------ALFIN1     <---------At4g35610   --------->ARR14(2)     <---------ZAT14 -->ALFIN1     <---------ALFIN1  ----------->RAV1(1)------>NtERF2 <---------ARR11(3)     <------NtERF2 ---AtMYB61   --------->ZAT18   <-----------------AGL1----------->RAV1(1)  ----------->RAV1(1) <----- >ALFIN1      <---------ZAT18  --------->SPL7 <-----------RAV1(1) <---------ARR11(1)  --------->At4g35610 ---GAMYB     <-------TEIL<---------LBD16   --------->At4g35610  <---------CCA1(2)    <---------At4g35610   ttgaggagctgcaaggtccacttcggcacccggtaccacagtaggcatctgtggtgccacaatatccatatctactgcaacataagttggctgcacatcc  18102000       <---------ALFIN1      <---------ZAT14      <---------ZAT18      --------->ZAT14      --------->ZAT18    --------->ANAC46   --------->SPL7                           --------->DAG2  <-----------GT1                           <---------TOE2(3) <---------SPL7                             <---------TOE1(3) -----GAMYB                             <-------GAMYB -------MYB52(1)                       <---------MYB46(3) ----->LBD16                          <---------YAB1 --ARR14(2)                        <---------YAB1               ---------->DOF2     <----------DOF2 ->ARR14(2)    <---------ANAC46    --------->ICU4           <------ZmHOX2a(1) <---------ICU4   ------ ----LBD16<-----------RAV1(1)   ----------------->AGL1  ---------->DOF2  <-----------GT1    <--------P   ggttgtaccgcactgttgcgaaaacacggtttttgccatgatggttaaggtgaagagaaaaaggatgaaagcgtttttcaacattgctcttagggtagcc  18102100                   <---------ANAC58                   <---------ANAC58               <-------GAMYB              --------->ALFIN1                    <-----------TBP <------MYB46(1)          <---------ANAC46                       ------->TEIL     <------MYB83     <---------AtLEC2                    <-------GAMYB           --------->MYB59     <------------CBF <---------ANAC46  <---------ANAC46     --------->ALFIN1 ----------->GT1       ----------->GT1 ----------->AGL1<---------ANAC46     --------->ALFIN1   <---------ZAT6      <------------CBF <------   attttgtgtatggagggtgttgtgtgaagaaatgaagaaggtgtgttgatgtatttatagtgtaaatttggtctattcaaattgaaatattgatcagtgt  18102200                         <----------DOF2                   <------------CBF                  --------->ATHB12               <------------CBF              --------->ATHB12             --------->ICU4             <---------YAB1          ---------->DOF2     <----------DOF2     <---------DAG2                <-----------GT1 ------------>CBF           ---  --------->ARR11(3)    <---------ANAC58            --------------->AtSPL8 ----------->HVH21      <--  <---------ARR11(3)<---------WOX13(1)             <----------DOF2 ---------->DOF2             ------ ---ZAT6  <---------YAB1<---------ANAC58 ------------>CBF   --------->ANAC46           <-----------GT1   tagacatctttcacgattattgattggctttttctgagtcaaagtcaatgccactttgtaccacttaacaaaagtcaatgacacagttttttctcttgtc  18102300                                                                         <---------ANAC46                                            <---------ANAC55(2)          <---------ANAC58                          <------ZmHOX2a(2) --------->ANAC55(2)          <---------ANAC58 <---------YAB1   <-----------HVH21      --------->ARR14(2)         --------->ANAC58        --------- ------>ICU4   --------->DDF1--------->At4g35610               <----------ID1              <---------YAB1 -------MYB52(1)<---------DREB2C(2)      <---------ARR14(2)---------->DOF2            <---------ICU4 ---->ID1     <-----------HVH21<------ZmHOX2a(2)  --------->YAB1    --------->ANAC58 <---------ATHB12   gttatgagaaattccatgtcggtcatagatcagatcaaaaacgaatatgtaatcaaaattttaaagagccaagttacttggatgaaaatcattctcataa  18102400                                                                                                  <--     <---------WOX13(1)                        <-----------GT1                                    ---   --------->ATHB12                        --------->ARR11(3)                                  <-----  <---------YAB1      <---------TOE2(3)    <---------ARR11(3)                            --------->ARR11(3) >YAB1  <---------TOE2(3)                <---------TOE2(3)                      --------->At4g35610   aaacttgattgagataatcaagtttagattagttcaaacgtttgagatttttctattgaatagttccaagtttttgttaattagctcaaacgatattgtt  18102500                     <---------WRKY12                     <---------WRKY38(1)                     <---------WRKY45              ---------->DOF2                    <<<<<<<<<<WRKY11           <----------DOF2                    <<<<<<<<<<WRKY26      --------->HSFC1(2)                    <<<<<<<<<<WRKY6       <---------HSFC1(2)            <---------AHL20(2)            --------->HSFB2a(1) -------At4g35610   <<<<<<<<<<WRKY43      <---------HSFB2a(1) ------>At4g35610   <<<<<<<<<<WRKY38      --------->KAN4(1)            <-----------GT1 ----MYB52(1)       --------->WRKY18(1)   <---------KAN4(1)  <----------DOF2   agctaatatagcattttttttggtcaactaatatagcatttagaacgttcttttaaagtcttactttgatttttaacaaaaattgtatggaattgtgaga  18102600  Previous    Next  AGI:  At2g43620.1    Description:  chitinase, putative. similar to glycoside hydrolase family 19 protein [Arabidopsis thaliana] (TAIR:AT2G43610.1); similar to chitinase [Chenopodium amaranticolor] (GB:BAA22968.1); similar to chitinase [Chenopodium amaranticolor] (GB:BAA22966.1); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726); contains InterPro domain Chitin-binding, type 1; (InterPro:IPR001002) Range:  from: 18100847    to: 18102102    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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