Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->LBD16                                                                          <---------ANAC55(2)                                                                          --------->ANAC55(2)                                                                          <---------ANAC55(1)                                                           ------->TEIL   <---------ANAC58       ----------->GT1                               <---------AHL20(2)   <---------ANAC58      <---------TOE2(3)                             --------->AHL20(1)    <---------ANAC46    ---------->DOF2                                 --------->AHL20(2)   <-------TEIL -------ANAC55(2)                            <---------AHL20(2)          ------>ZmHOX2a(2) ------>ANAC58              <---------AHL20(2)      <---------AHL20(2)  <------ZmHOX2a(2) ------>ANAC58              --------->AHL20(1)   --------->AHL20(2)    <---------ARR14(2) ------>ANAC55(2)           --------->AHL20(2)--------->YAB1     <---------DAG2 >AHL20(1)     --------->ANAC58   <---------YAB1 <---------AHL20(2)    --------->AGP1 >ARR11(3)     --------->ANAC58 <---------AHL20(2)  <---------AHL20(1) --------->ARR14(2)     ------- -ARR11(3)     --------->ANAC46<---------AHL20(2)--------->YAB1  <----------DOF2   --------->CCA1(2)-   acgcattaaaggtaaaaacgccaatgcaaattttttatttttggtttttaataatataatgaacttacttttagatccgtatgagaaatgagccaatata  18093700                    <---------DAG2              ---------->DOF2                  ------>NtERF2             --------->CCA1(2)                 <---------ALFIN1--------->At4g35610        <---------TOE1(2) --------------------->WRI1        ---------->DOF2               ------>NtERF2     ------>ZmHOX2a(2)    <----------DOF2  <---------ARR11(3)                      ------>ZmHOX2a(1)<    <------ZmHOX2a(2)<----------DOF2       --------->ARR11(1)                      <----------DOF2 <- --->DOF2     <-----------GT1    <---------At4g35610      <---------YAB1       --------->GLK1(2)<---- -------->At4g35610 --------->AtMYB61  ---------->DOF2 --------->ICU4          --------->ARR14(2)  <-   gcagcgatctcacgtttagccacctttcctttgtaagctccaaaagatttgaaagcagtaatgaaagcctcataagtgtagaatccttttgccgagcagt  18093800                                                                     --------->DREB2C(2)                                                                 --------->WRKY12                                                                 --------->WRKY38(1)                                                                --------->ALFIN1                                                               ------->PIF5                                                               <-------PIF5                                                               ------->MYC3                                                               ------->MYC4                                                               <-------MYC3                                                               ------->MYC2                                                               <-------MYC4                                                               <-------MYC2                                                              <---------ANAC46                                                              <---------TGA1a                                                              <---------PIF3(3)                                                              --------->TGA1a                                                              --------->PIF3(3)                                                              <---------O2                                                           ---------------->PIF3(2)       <----------DOF2                                    <---------At5g28300                    <--- ----------DOF2                                          <-----------GT1                  --------->ARR14(2) --------ANAC58                              ===========================MYC_MYB           <---------ARR14(2) -----MYB52(1) <---------YAB1                <------------MYB.PH3(1)--------->DEAR3(2)   <---------CCA1(2) --------ANAC58--------->ICU4              --------->MYB52(1) --------->O2   <---------TOE2(3)-------   tgctttcgactttgctcatgatgctatcgaacaacgctgatgtgataacggtttctattttaccacgtggaccggcatcaacgttgtagtcgtatccgta  18093900                                                                                             --------                                                                                           ------>ZmHOX2a(1)                                                                                          --------->TOE2(3)                                          --------->LBD16                     --------->At4g35610                                          --------->At4g35610       <---------GLK1(1)--------->HSFB2a(1)                                         --------->ANAC46           --------->GLK1(1)<---------HSFB2a(1)                                        <---------LBD16       =========================RAV--------->TOE1(3)                                      --------->GLK1(2)       ----------->RAV1(1)  ----------->RAV1(1)                                      <---------ARR14(2)     <------NtERF2    <---------At4g35610                                      --------->ARR14(2)    ------>NtERF2    <-----------RAV1(1)  <-----------GT1                    --------->RVE1(1)   <---------ANAC58  ====================RAV ------YAB1                        --------->AHL20(2)    <---------ANAC58  ----------->RAV1(2) -->LBD16               --------->At4g35610           <----------DOF2      <---------At4g35610   tgattttcccttgatattgcaagggccactgaaacaaaaaaatccgcagtattcatctttggtgccacagaaaccccatctgctgcaacattccttaagg  18094000                                                                            <---------ANAC58                                                                            <---------ANAC46                               <---------ZAT14                              <---------ANAC58                           --------->HSFB2a(2)                             ----------->STF1                           <---------HSFB2a(2)                           ----------->TGA1                     <---------ARR14(2)        <---------ICU4    <----------ID1                     --------->ARR14(2)   ------>NtERF2          ----------->GT1 -->DOF2        --------->AtLEC2    <-----------HVH21           ----------->GT1                 <----   ccagggcaactagtatccatgcagttctgcgagaacacggtctcggccaaaattgctagaatgaagagggaaaaaatgacgtttttgatggtcattttgt  18094100                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                 <---------ZAT18                           <---------AHL20(2)                                                 --------->ETT(2)                         --------->AHL20(2)                         <---------ARR14(2) <---------ANAC58                           --------->ATHB12                <------ZmHOX2a(1)           <---------ANAC46                         <---------WOX13(1)              --------->MYB59          --------->ALFIN1 <-----------TBP             <------------CBF -----YAB1<---------ZAT6 --------->ARR14(2) <---------ANAC58                      <---------YAB1   tatagcaaatgagtgttaggaaatggggattttgtgaacatgaggggcttgtggacatatttgtagttcaaaatcagtcgatttgtaattgatttaatat  18094200                                                                                  --------->AHL20(1)                                                                       ------>ZmHOX2a(2)                                                                      --------->CCA1(2)                                                                     --------->ARR14(3)                                                                     <---------ARR14(3)                                                                     --------->AGP1                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                     --------->ARR11(3)                                                                     <---------ARR11(3)          <---------AHL20(2)                                         <-----------ARR10          --------->AHL20(2)                                         <---------AGP1<---------AHL20(2)         <---------AHL20(2)                            --------->AHL20(2) <---------STY1(2)    <---------ARR11(3)                   <------ZmHOX2a(1)     --------->ANAC46   <---------ARR11(3) --->ARR11(3)                            =====================================HOX2a_HOX2a ----AHL20(2)                            ====================================HOX2a_HOX2a ----ARR11(3)                --------->HSFB2a(2)       <---------AHL20(2) --------->STY1(2)      ---- --->AHL20(2)                <---------HSFB2a(2)    --------->AHL20(1)<------ZmHOX2a(2)    --------->ZAT6 --->AHL20(1)          <----------DOF2 <---------TOE1(3)    <---------ARR14(2)    <---------AHL20(1) ----AHL20(1)   <---------ANAC55(2)    <---------TOE2(3)    --------->ARR14(2)   ----------->TBP-----   attcttgatattttaaatacttaagcttttgctagaaatttaaggaagactacatatattaatatccacaagatctagctactatatatttgaacactat  18094300                                                               ------------>CBF                                                             ----------->HVH21                                                            <-------MYC3                                                            ------->MYC3                                                           ===========================bZIP_DOF                                                           --------->O2                                                           <---------O2                                                           <---------TGA1a                                                           --------->ANAC55(2)                                   <---------At4g35610     <---------ANAC55(2)                                   --------->At4g35610     --------->TGA1a<---------ANAC58                              <---------HSFB2a(2)          --------->ANAC46<----------DOF2                              --------->HSFB2a(2)      <-----------HVH21  <---------ANAC58         <---------WRKY12  <----------DOF2            <----------DOF2  <---------MYB52(1)      --------->ANAC58     ==========================================bZIP_DOF     <---------YAB1      --------->ANAC58--------->LBD16             <-----------GT1 --------->GLK1(2) ----->AHL20(2)      <---------LBD16             <---------AHL20(2)  <-----------RAV1(1) ------>TBP      <-----------GT1  --------->GLK1(2)   ===============bZIP_DOF     ------------>CBF   aaattcgcaagtcaactattaaccctggactttgagaagctgaaactagaattaatctttcacgtgacaatctgttgctttgttatcaatgttccatccc  18094400                                                             --------->TOE2(3)                                                            --------->ATHB12                                                            --------->YAB1                                                            -------->ATHB1                                                            <---------ICU4                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                                   <---------YAB1                                                 <---------ICU4                                                 --------->YAB1 --------->AHL20(2)                                                --------->ICU4<---------YAB1                                            ----------->GT1 <--------HAHB4             ------->TEIL                 <-------MYC3     --------->ICU4           <-------TEIL                   ------->MYC3    --------->GLK1(2)                  <------ZmHOX2a(1)        <---------At4g35610    <---------AHL20(2)<--------HAHB4--------->AHL20(2)            ========        --------->At4g35610    --------->AHL20(2)--------->ATHB51                   <---------MYB46(3)   <----------DOF2 ---------->DOF2 <---------AHL20(2)---------->DOF2<----------ID1 --------->ALFIN1   tatgactttcagatgcacttaaaaaggagcaaattatataaacatgtggaataattaaagaatcattaaaaaaacaaaatcgaaggtggttcttaggaaa  18094500              --------->ANAC58              --------->ANAC46              --------->ANAC58        <------ZmHOX2a(2)       --------->ARR11(3)                                                      --------->GLK1(2)      --------->At4g35610                   <---------ARR14(2)                <---------GLK1(2)      <---------At4g35610              --------->ANAC46              <---------YAB1   <-------TEIL<---------MYB52(2)      --------->ANAC58           <---------AHL20(2) --------->ZAT6 ==============HOX2a_HOX2a             --------->ANAC58    --------->ZAT6<-----------GT1      -------   ttagattcagatcaccaagtaaccagtatggcctccagtttaagccaatcccaaaacaaaaacactagtttatttttacagaatctaacaatagcataaa  18094600  Previous    Next  AGI:  At2g43600.1    Description:  glycoside hydrolase family 19 protein. similar to glycoside hydrolase family 19 protein [Arabidopsis thaliana] (TAIR:AT1G56680.1); similar to chitinase [Brassica rapa subsp. pekinensis] (GB:BAF35569.1); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726); contains InterPro domain Chitin-binding, type 1; (InterPro:IPR001002) Range:  from: 18093126    to: 18094095    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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