Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                      <---------YAB1                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(1)        <---------MYB52(1)                                                         --------->AHL20(1)  --------->YAB1                                                                <---------AHL20(2)  <---------ICU4                                                                --------->AHL20(2)  --------->ATHB12                                                             <---------AHL20(2)  -------->ATHB1                                                             --------->TOE2(3) <---------ATHB12    ----------->GT1              <---------TOE2(3)        --------->AHL20(2) ------->WOX13(1)   <---------TOE2(3)            ---------->DOF2           <---------ARR11(3) ->ZmHOX2a(1)      ---------->DOF2          <---------YAB1                 <---------AHL20(1) >ARR14(2)    <---------ZAT14               --------->ICU4                 --------->AHL20(1)      -- -ARR14(2)    --------->ZAT14             --------->YAB1      <---------REM1(2)--------->AHL20(2) <--   ccaatcattcgtttagtttactaaagttataaacttcgaatgagtcatgactaaagtagatgtatacacagacacaaaatattaatttatttttgagtat  18089400                                         --------->TGA1a                                         <---------O2                                         --------->O2                                         <---------TGA1a                                         <---------ANAC58                                         <---------ANAC46                                         <---------ANAC58                                     <-----------HVH21                               <---------------                                  --------->SPL7                                     <---------------                                <-----------HVH21                           --------->O2                                <---------SPL7                              <---------O2    --------->CCA1(2)          <---------ANAC58                             ========================= <---------YAB1          --------->ARR11(3)                                 --------->TGA1a         - -ANAC46       ---------->DOF2 <---------ANAC58                             --------->ANAC46    ----- -------->DOF2 ====================================bZIP_DOF --------->YAB1  <---------TGA1a     ===== -------AHL20(2)         <---------ARR11(3)            --------->At4g35610<-----------GT1<---------GLK1(2)   ataaagatagaagagaagaaagacataaatcttacgtccggtctcgtgagtgaaatgagcaaacatggtagcaatttcacgtctggtaacagaattggca  18089500                                        <---------REM1(1)                                    <---------O2                                    <---------ANAC55(2)                           ===================bZIP_DOF                           ---------->DOF2                        <---------TOE1(3)     --------->GLK1(2)                        <---------TOE2(3)     <-----------ARR10 --------->YAB1                     --------->DOF5.7(2)--------->ALFIN1        <---------ICU4<--------P   <---------ANAC46 <----------DOF2 <---------ANAC46           <---------ATHB12  <---------LBD16   ==========================bZIP_DOF    --------->ANAC46    <---------WOX13(1) --------->ALFIN1  <---------ANAC46 --------->O2          --------->ANAC58   <-------GAMYB --AG             <------NtERF2 <-----------HVH21         --------->ANAC58  <------MYB46(1) --AGL1  --------->ICU4<---------DOF5.7(2)   <---------GLK1(2) --------->MYB46(3)  --------->YAB1 ======bZIP_DOF  <---------RAP2.3(1)<---------TGA1a      --------->LBD16    <------MYB83 -------->ALFIN1<---------RAP2.6(2) --------->TGA1a      ------>NtERF2      <---------MYB46(3) ----->DOF2    --------->At4g35610 <---------LBD16      --------->LBD16 <---------ZAT2      --------- =============================================bZIP_DOF <---------LBD16  --------->ZAT2  ----------->GT1   aagttggggaaagtattagcggcgttaacgaaagagtcacgggtgtagaatcttttccccgcgcaaccattaccagcttggttgataatattgttaaaga  18089600                                  <---------DEAR3(1)                                 --------->ALFIN1                        ------>MYB46(1)                        ------>MYB83                      --------->AtMYB61                      ------->GAMYB                      --------->DEAR3(1)                      ----------->HVH21                      --------->MYB46(3)                      <---------MYB59                     --------->SPL7                     --------->DEAR3(2)                                        --------------------->WRI1                     --------->MYB46(3)                                        <---------ZAT14                    ------>MYB83<-----------HVH21                ------>ZmHOX2a(2)                    ------>MYB46(1)             --------->ZAT6 --------->ARR14(2)                   --------->MYB55(1)        <---------ALFIN1  <---------ARR14(2)                   --------->ORA47(1)     --------->ZAT6     ----------->HVH21 --------->LBD16                  ------->GAMYB <---------MYB52(1)     --------->ANAC58        --------->ZAT14     --                  --------->DEAR3(1)   --------->ARR14(2)<------ZmHOX2a(1)    --------->DEAR3(1) ----                  <---------MYB46(2)   <---------ARR14(2)===============HOX2a_HOX2a     ------->TEIL                  <---------MYB55(2)   <---------TCP20 --------->ANAC58      --------->ANAC46 <------                  --------->MYB46(3)  --------->GLK1(1)--------->ANAC46    <---------ALFIN1  <------- ->DOF2          --------->DEAR3(2) <------NtERF2   <---------REM1(2)  --------->MYB46(3)    <-------   aaccttgtgtcacaatgctaccgaccgaccctccggtcggggttccactacctctacaaggacctgatcggcatccaacaccgcagtatgcatcgtcggt  18089700          --------->MYB52(1)          ------>MYB46(1)        ------->GAMYB        <---------MYB59                   --------->LBD16     --------->MYB52(1)                  ------->GAMYB     --------->ARR14(2)               <---------ALFIN1                       --------->TOE2(2) --------->RAV1(1)                    <---------ARR14(2)             ---------->DOF2 ----->SPL7         ----------->RAV1(1) --------->MYB46(3)       <---------HSFB2a(2) ---DEAR3(2)  --------->MYB52(1)   --------->ANAC58              --------->HSFB2a(2)   <------NtERF2 --TOE1(2)------>MYB83 ------->GAMYB  --------->ARR14(2) ------------>AtMYB77--------->TOE1(2) --DEAR3(1)  ----------->HVH21     --------->ANAC58     ----------->HVH21    --------->TOE2(3)  <----   accacagtaaccgaactgactgcaacagaggtttggagcgcaaccgcagttttgagacttgacagtttcagaaaagaaacctaagaggcagagaagaagg  18089800                                                                                                <----                                                                                                <----                                                                                               ------                                                                                           --------->MYB111(1)                                                                                        <------MYB46(1)                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                        <------MYB83                                                                                       --------->MYB59                 --------->ANAC58                                                      <---------MYB46(3)                 --------->ANAC58         <---------MYB46(3)     <---------ANAC46      --------->MYB55(2)      <---------ARR11(3)                 <---------TOE2(3)       ----------->GT1   <-----------RAV1(1)      --------->ARR11(3)             <---------ANAC58       <---------MYB46(3)    --------->ARR11(3)   <------ZmHOX2a(1)         <---------ZAT6 *TSS           --------->ALFIN1     ----------->ARR10 <---------TOE2(3)         <---------ANAC46<-------GAMYB--------->DAG2         <--------P <--------P --ZmHOX2a(1)  ---------->DOF2       <---------ANAC58 ---------->DOF2<-----------TBP  <---------ANAC46   actaaggagatttttgtgaaagccatgttttgtgttattgtttgtggttgagagggcaaaggtggtgaggtatatataggggtagatgttgggtagtttg  18089900                                                         <-------TEIL                                       <----------DOF2<---------ANAC46                                     ---------->ID1 --------->LBD16       xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)          <---------ANAC46                            <----- --MYB46(1)                      <----------DOF2   <---------ANAC58                            <----- --MYB83<------------CBF      --------->ARR11(3)   <---------ANAC58  ------->TEIL          <---------AtMYB61 --->MYB59                    <---------ARR11(3)  <---------LBD16 --------->ANAC55(2)   <----------DOF2   gtcatttgtctattgggataagtggatgtaaatgtctttttcttttttgtatagcggggtacatatttatgtatttcgaaacgagtttgacttttggtcg  18090000                                                                       <---------WOX13(1)                                                                     <---------AHL20(2)                                                                     --------->ATHB12                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                                   <---------AHL20(2)                                                                  --------->YAB1                                                                 <---------YAB1                                                                --------->AHL20(2)                                                                <---------AHL20(2)                                                                --------->AHL20(1)                      --------->ZAT18                           <---------AHL20(1)                      <---------ZAT18        <---------ANAC58  --------->YAB1 ----ANAC58    <---------YAB1                <---------ANAC58  --------->AHL20(2)    <----------DOF2 ----ANAC58    ------->TEIL                <-----------GT1    <---------YAB1         <---------DAG2   tgttcttactcaagatgaatattgtggacttggtctaaattcaattttcttgttaaacagaactattatattaattgatatttctcacttttgtttcata  18090100                               --------->MYB46(3)                        -------->ATHB1                        <--------ATHB1                        <---------ICU4                        <------------ATHB5                        --------->ATHB12                                                           <-                       <---------YAB1                                                              <-                       --------->ICU4                                                              --                       <---------ATHB51                                                         <----                       <---------ATHB12                                                         -----               <---------GLK1(1)                                                             --------               --------->GLK1(1)                                                           <---------ATHB12            <---------YAB1<---------WOX13(1)                 ----------->GT1               --------->ICU4  <-----------GT1   ------------>ATHB5      <-------TEIL  <-----------GT1              <---------At4g35610   ttttgaacaattctatgatttcccaatgattgaacaaacaaaaatgttcgtttttctattaaactgtttaatacatgtaatgtcaatggagcaaacatta  18090200 <---------AHL20(1) --------->ARR11(3) --------->AHL20(1) --------AHL20(1)                  --------------->AGL15 --------AHL20(2)                  <---------------AGL15               --------->MYB52(1) ------->AHL20(1)        <---------------AtSPL8                      <---------MYB52(2) -----AHL20(2)           --------------->AtSPL8          <----------DOF2 ---->AHL20(2)     <---------AHL20(2)         --------->MYB52(1)------>ZmHOX2a(1)              <----- ->TOE2(3)        --------->AHL20(2)       <---------At4g35610 --------->TOE2(3)      ----------->GT1   aaatattttgttattctatatttaatacatgtacaaactatatggagcaaacagtatgtctttttcctaaaactaacttaagcttgaatcgtttattttt  18090300  Previous    Next  AGI:  At2g43590.1    Description:  chitinase, putative. similar to chitinase, putative [Arabidopsis thaliana] (TAIR:AT2G43580.1); similar to Basic endochitinase CHB4 precursor (GB:Q06209); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726); contains InterPro domain Chitin-binding, type 1; (InterPro:IPR001002) Range:  from: 18088408    to: 18089844    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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