Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                            <--------                                             --------->CCA1(2)                              ---------                                            <---------ARR14(2)                              <--------                                            --------->ARR11(3)                            <----------                             <-----------------AGL1             ----------->GT1       --------->GLK1(2)            <-----------GT1 ------->TEIL    --------->ARR14(2)  <----------ID1       --------->ARR11(3)     <---------AHL20(2) --------------->AtSPL8    <--------P   --------->DAG2        <---------ARR11(3) ------>ANAC46  --------->GLK1(2)          <------ZmHOX2a(1) ---------->DOF2         <---------GLK1(2)   actcaatttttatgtcacaatctagtaatgtaccctagaaggctaggatatggttagtgtataaaaaggtcaaaaaccgagaaaaaagattcttacgtcc  18086700                                                                                        ---------->DOF2                                                                                     <---------TOE2(3)                                                ------->GAMYB                     --------->DOF5.7(2)                                               <------------MYB.PH3(1)           <----------DOF2                                             --------->MYB52(1)                 <---------ANAC58  <---------ANAC55(2)                        <-----------GT1  --------->ALFIN1  <---------ANAC46 -->ZmHOX2a(1)                       ===============================bZIP_DOF    <---------ANAC58  --- -ANAC58                             --------->TGA1a        --------->ZAT2   <---------DEAR3(1)  ---- >ANAC55(2)                          --------->O2           <---------ZAT2   ----------->TGA1    <--- -ANAC58             --------->YAB1  <---------O2        ---------->DOF2  <---------AtMYB61      <--- -GT1           --------->At4g35610  ===================MYC_MYB<---------LBD16 <------NtERF2    <----   tgtctcgtaagtgaaatgagcaaacatggtagcaatttcacgtctagtaacggtattagcaaagctggggaaagtattggtggcgttaatgaaagagtcc  18086800                                                                                         <-----------HVH21                                                                                        --------->ANAC46                                                                                     ------>MYB46(1)                                                                                     --------->MYB52(1)                                                                                     ------>MYB83                   --------->ANAC46                                                ------->GAMYB                   --------->ANAC58                                                --------->AtMYB61                   --------->ANAC58                                               --------->MYB46(3)                  <---------LBD16                                                ------>MYB83<------NtERF2                  --------->LBD16                                                -------->P ------>NtERF2                 --------->LBD16                                                 ------>MYB46(1)<----               >>>>>>>>>>E2Ff                                                   --------->MYB55(1)               >>>>>>>>>>E2Fb          <---------WOX13(1)                      <---------MYB111(2) <-          <----------DOF2              <--------P                              --------->MYB46(3)<---          <---------DAG2              <-------GAMYB                            <---------MYB46(2)---- ----------->GT1<---------LBD16      <------MYB46(1)                           <---------MYB111(1) <- ------>LBD16  >>>>>>>>>>E2Fa        <---------MYB46(3)                     <-----------GT1<---------ALFIN1 ----->LBD16   >>>>>>>>>>E2Fe        <------MYB83                       <---------ARR11(3)<---------ABI4(2) ------LBD16   >>>>>>>>>>E2Fc     <---------ANAC46                    --------->ANAC58 --------->RAP2.6(3) ------ANAC46  >>>>>>>>>>E2Fd <---------LBD16<---------TOE2(3)    <-----------HVH21<---------MYB59--- -----LBD16   <-----------GT1--------->MYB52(1)      ---------->DOF2  --------->ANAC58 --------->DEAR3(2)   cgggtgtaaaaactttttcccgcgcatccattaccggcttggttgataatgttgttaaagaaaatttgtgtcacgatattaccaaccaaaccggcaccgg  18086900           ------>MYB83         --------->DREB2C(2)         --------->DEAR3(1)         ------->GAMYB         --------->MYB46(3)         --------->DEAR4(1)      <---------ALFIN1     <---------WRKY38(1)     --------->ETT(2)     --------->ZAT18     <---------WRKY12     <---------ABI4(2)    --------->TCP15(2)    --------->TCP16(2)   <---------ARR14(2)   <---------PCF5   --------->PCF2   <---------TCP16(1)                                                     ------>MYB46(1)   <---------TCP20                --------->ANAC58              --------->LBD16   --------->ARR14(2)    <---------YAB1                     --------->ARR14(2)      ----------->RAV1(1)   <---------TCP11(2)<------ZmHOX2a(1)                      <---------ARR14(2)--------->MYB52(1)  <-----------TCP11(1)  <---------MYB59                  <---------ZAT6 ------->GAMYB              -- -----MYB52(1)     --------->ANAC58                      --------->ALFIN1 --------->MYB52(1)       -- -----MYB83------>MYB46(1)  <---------WOX13(1)       <---------ZAT14    <---------MYB59           --- -----P --------->DEAR3(2)--------->ATHB12           --------->ZAT14--------->MYB46(3)          <---- ----->ALFIN1      --------->ANAC46       ----------->RAV1(1)--------->SPL7  ----------->HVH21------- -----MYB46(1)     --------->ANAC58      --------->MYB46(3)<---------SPL7 ------>MYB83   <---------TOE2(2) ------>MYB55(2)<---------REM1(2) --------->ANAC58--------->At4g35610--------->MYB52(1)--------->TOE2(2)   tagggggtccaccgactctacaaggacctgattggcacgtagaaccacagtaatctgcagtggtaccgcaataaccgaactgactgcaacataggttagg  18087000        <---------TOE1(2) <------NtERF2 ------->ANAC58                                                       <---------ARR11(3) ------->ANAC58      <-----------GT1                  <------ZmHOX2a(1) ------>ZAT18       ----------->HVH21    --------->TOE2(3)            <---------GLK1(2)         <---- -----RAP2.3(3)   --------->CCA1(2)      --------->TOE1(2)            --------->ARR11(3)        <---- -->MYB52(2)   <---------TOE2(3)         --------->TOE2(2)  <------ZmHOX2a(1)           <----------DOF2   ggcgcaatcgcagttttgagatttgacggtttcagaatataaacctaagagggataggagaaggattaagaagatttttgtgagagccatctttgggttc  18087100                                                                                <---------ATHB12                                                                                ------------>CBF                                                      <------------CBF         --------->ANAC58                                                 <---------ANAC46              --------->ANAC58                                                 <---------ANAC58             --------->WOX13(1)                                                 ----------->GT1            ------------>CBF                                                 <---------ANAC58   --------->ALFIN1                                             <------------CBF      <---------LBD16          <--------                                            --------->CCA1(2)      --------->LBD16          ---------                                           --------->ARR11(3)     <---------ANAC58         --------->AHL20(2)     *TSS<------ZmHOX2a(1)           <---------YAB1 <---------ARR14(2) <---------PCF2  <---------YAB1 -----ANAC58             <---------TOE1(3) <---------ARR11(3)     <---------ANAC58   --------->YAB1 -----ANAC58             <---------TOE2(3) --------->AHL20(1)     <---------ANAC46 <------------CBF<-   ttgttgtttgaggagagggaagagtttgaggtttatatgatgaaagatattgggtatattggtcatttccgtgggactggcaatcaattgtgatttaatt  18087200      --------->AHL20(2)                                      ----------->RAV1(1)      <---------AHL20(2) <---------WOX13(1)                   <---------RAP2.6(3)     --------->AHL20(2) >>>>>>>>>ARR2                         ------>NtERF2 -AHL20(2)             --------->ATHB12                      --------->RAP2.6(2)              <------ >AHL20(2) <-----------GT1                                   <---------ETT(1)    --------->AHL20(2) ---------DOF2        <---------YAB1   <---------ARR11(3)   <xxxxxxxxxxxxxxxxsmallRNA(i)------->TEIL   tctttcatttatttaacaatggttttgattgttatgccgaagatgtatgggcaattgaattggccgacaaaaaaaaaaaaaaaaaaaatgaattttcttt  18087300                                                  --------->ATHB51                                                  <--------ATHB1                                                  <---------ICU4                                                  --------->ATHB12           <-----------GT1                                                  -------->HAHB4     <----------DOF2                                                 <---------AHL20(2) ------>ZmHOX2a(2)                                                 --------->AHL20(2)<------ZmHOX2a(2)                                                 --------->ICU4    <---------RVE1(1)                                                 <---------ATHB51 --------->ARR11(3)                                                 <---------YAB1   <---------ARR14(2)                                               --------->YAB1     --------->ARR14(2)                                          ----------->GT1         <---------ARR11(3)                                      <---------MYB46(3)         <------ZmHOX2a(1)----------->GT1                                    --------->ZAT14            --------->MYB59 <---------AtLEC2                   <--------P<---------------AtSPL3   <---------MYB46(3)<---------AHL20(2) ----DOF2      --------->TOE1(2)    <---------ZAT14 <---------WOX13(1)  --------->AHL20(2)   <-------   taaaaacaaaaaaaaaacctggtagattggaattgtactgtagttggaaaaataattggttgaattaggatcttttaatttacatggttacacatttttt  18087400                                               <---------YAB1                                            <---------AHL20(2)      ---------->ID1                                  --------->ARR11(3)            <---------MYB52(1)                                  <---------ARR11(3)          <---------DEAR3(2)                                  <---------AHL20(1)         <------------------------ANAC81                          <---------REM1(1) --------->AHL20(2)<---------MYB46(3)         <------MYB83                      --------->DAG2   --------->AHL20(2) <-----------RAV1(1)            <------MYB46(1)                     ---------->DOF2   <---------AHL20(2) ------->GAMYB                  <---------DEAR3(2)                  --------->AHL20(2)   <---------AHL20(1)<------------AtMYB77      ---------->DOF2<-- --AHL20(2)  <---------ATHB12  <------ZmHOX2a(1)       --------->MYB52(1)   ---------->ID1<---------MYB52(1)   ttgaatttggaactaatgaataaaaaagttgtaggatatattttatttttttatagataactgtcggtttgtttttttgtttttttaaagtcggtatgtt  18087500                                --------->YAB1                 <------NtERF2  --------->AHL20(2)                ------>NtERF2--------->YAB1                   ----------->GT1                <---------RAP2.6(3)                    <---------AHL20(2)                          --               --------->DEAR3(1)--------->AHL20(1)    <---------YAB1                             <--          ---------->DOF2   --------->AHL20(2)     --------->AHL20(2)                            ----  ------->TEIL --------->RAP2.6(2)               --------->AHL20(2)--------->ICU4              <----- -------TOE2(3)--------->RAP2.3(2)     <---------YAB1  --------->AHL20(2)    --------->ZAT18   ------   aatgaaactaagaaaagccgcccttcacaaataataatattatgttaaccaaaaaatataaatgtggtaatttttgaagtgcgatgttagaaaattgtcg  18087600  Previous    Next  AGI:  At2g43580.1    Description:  chitinase, putative. similar to chitinase, putative [Arabidopsis thaliana] (TAIR:AT2G43590.1); similar to Basic endochitinase CHB4 precursor (GB:Q06209); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726); contains InterPro domain Chitin-binding, type 1; (InterPro:IPR001002) Range:  from: 18085726    to: 18087105    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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