Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->GLK1(2) -----AHL20(2)                             <---------TOE2(3)          <---------ICU4 ---->AHL20(2)                           <---------AHL20(2)        --------->YAB1 --->AHL20(1)                        <---------AHL20(2)  <----------DOF2               <-----------GT1 ----AHL20(2)                       --------->AHL20(2)<---------ARR11(3) <---------AHL20(2) ----AHL20(1)                       <---------AHL20(2)--------->ARR11(3) --------->AHL20(2)  <------- --->AHL20(2) --------->MYB46(3) --------->YAB1  <---------YAB1  --------->AtLEC2      <---------AHL20(2)   aatttagtcaaattgaaccaatatagtcgtaactagaataaaatttatgttataagtatctttattcattcaaaattatatgagaaaatttacttacacc  18084100                                                                                                =====                                                                                                <----                                                                                                -----                                                                                                =====                 --------->At4g35610                                                            <----            <---------ANAC58                                                                    <----            --------->ANAC55(2)                                   ----------->GT1               <----            --------->O2                                     <---------ZAT2        ------>NtERF2<----            <---------ANAC58        <---------ANAC46         --------->ZAT2       ------>NtERF2<-----            <---------ANAC55(2)  --------->ARR14(2)      --------->DEAR3(1)       --------->RAP2.6(2)            <---------ANAC46     <---------ARR14(2)     --------->ANAC58         <---------RAP2.6(2)            <---------TGA1a  --------->LBD16            --------->ANAC58        --------->At4g35610            <---------O2     <------NtERF2           <---------ABI4(2)          <---------At4g35610   <---------ANAC58          ------>NtERF2           --------->MYB46(3)      --------->ZAT2  --------   <---------ANAC58         --------->DEAR3(1)       <---------HSFC1(2)      <---------At4g35610-----   <---------ANAC46      --------->ANAC46           --------->ANAC58         --------->At4g35610<---- --ALFIN1   --------->TGA1a<---------LBD16          --------->ANAC58   --------->ICU4  ----------->HVH21   ctgtttcttgggctacgtgagcgaaaaacgccgcgatttcgcgtttggagatggaagcaccgaagctagggtaagaattagctgcggccatgaaggtgtc  18084200                                                                                                    -                                                                       <---------MYB52(1)           -                                                                   <---------At5g28300             <-                                                                 ----------->HVH21                <--                                                                <-----------HVH21             <------ZmHOX2a(2)   --------->ZAT14                                           <---------At4g35610              <------   <---------ZAT14                                           --------->At4g35610              ------- ======================bZIP_DOF                              <---------TGA1a                 <------- -----ANAC46                                                 <---------O2                    <------- ---->TGA1a                                                  --------->ANAC55(2)             -------- ======================bZIP_DOF                              <---------ANAC55(2)             -------- -----ANAC58                                       ---------->DOF2<-----------GT1            <------- -----TGA1a                                        ====================bZIP_DOF              <------- -----bZIP60(1)        --------->WOX13(1)      <---------ZAT6======================================== -----O2            <------ZmHOX2a(1)      <---------ZAT14   --------->O2                    -------- -NtERF2--------->GLK1(2)                  --------->ZAT14 <-----------RAV1(2)              <------ZmHOX2a(1) ->ALFIN1   <----------DOF2             <---------ANAC46 <-----------HVH21                  <-------- ---->O2--------->ARR14(2)      <----------DOF2----------->GT1 --------->ALFIN1         --------->At4g35610 -----ANAC58------>ZmHOX2a(1)   =======================================bZIP_DOF  <---------ZAT6------   gtgagtgtagaatcctttgccaggacaatcacctctttggtttagtatagagttaaagaagtcaggtgtcaccgttccttctagtgaaacagcaggatct  18084300       <---------ALFIN1      <---------ZAT14     ------>NtERF2    --------->DEAR3(1)  --------->ABI4(1)  <---------ATERF1(1)  ------>NtERF2 --------->DEAR3(1) --------->DREB2C(2) <---------ALFIN1 ------->GAMYB -------->ORA47(2)                           <------NtERF2 -------->MYB46(3)                          <------NtERF2 --------ATERF1(1)                          ------>NtERF2 -------ALFIN1                              --------->LBD16 ---GLK1(1)                                 <---------At4g35610 -->GLK1(1)                                ----------->RAV1(1) --ARR14(2)           <---------ARR11(3)  --------->RAP2.3(1) --ARR11(3)           --------->ARR11(3)--------->ANAC46 ->ARR14(2)     --------->LBD16       <---------ATERF1(1) ->ARR11(3)    <---------ETT(1)    <------NtERF2            <---------SPL7 --ARR14(3)<---------ZAT14  <---------AtLEC2--------->At4g35610 ----------->RAV1(1)     ------->GAMYB ----ARR10 --------->ZAT2   ===========================RAV <---------ANAC58          ----------->RAV1(1) ========MYC_MYB------>NtERF2      <---------At4g35610     <---------ANAC58     --------->At4g35610 ->ARR14(3)<---------ZAT2   ----------->RAV1(2) <-----------ARR10           <---------ICU4  <-------- -GLK1(2)  --------->ZAT14------>ZmHOX2a(1)--------->DEAR3(1) --------->SPL7<---------ARR14(2)  ----- >ZmHOX2a(2)  <---------LBD16      --------->At4g35610   <-----------HVH21  --------->ARR14(2)  <----   ccaccgcctccactgctccggcaaggtcctgcctggcagccctcgccgcagaactcatcggtcgtaccacagtagccatatttgctgcaacagaagtcag  18084400      ----------->RAV1(1)     --------->MYB46(3)    ------>NtERF2   --------->DEAR3(1)                                                                         <------   --------->RAP2.3(2)                                                                        <------   --------->RAP2.3(3)                                                                        <------  --------->ATERF1(1)                                                                         <------  <------NtERF2                                                                          <---------ANAC58  --------->RAP2.3(1)                            <------ZmHOX2a(1)       ----------->GT1 <---------ANAC58  --------->RRTF1(1)                            ----------->GT1         <----------ID1   <---------ANAC46  --------->ERF1                              <-----------RAV1(2)     --------->DAG2     --------->ANAC55(2) <---------ATERF1(1)              ------------>MYB.PH3(1)            ================================ --------->At4g35610   --------->MYB52(1)    <------ZmHOX2a(2)       ---------->DOF2     <---------ANAC55(2) ---HVH21             ------>NtERF2        <------ZmHOX2a(1)   <---------YAB1     <-----------HVH21 ---->At4g35610      ----------->HVH21   --------->MYB59 <---------TOE1(3)    --------->ARR14(2) -----At4g35610      --------->DEAR3(1)<---------MYB52(1)<---------TOE2(3)    <---------ARR14(2)-----   aggcgcagccacagttttgagaggcgaccggtttggaaacggttaggatcaggaaaattagggttatgaagaaaagggcaaatcggtcatttcgtgatgt  18084500                                                                                         --------->REM1(2)                                                                                        ----------->HVH21                                                                                        <---------MYB52(1)                                                                                       --------->LBD16                                                                                      <---------ANAC46                                                                                      <---------ANAC55(1)                                                                                      <---------ANAC58                                                                                      <---------ANAC55(2)                                                                                      <---------ANAC58                                                                                     ------>ZmHOX2a(2)                                                             <---------ANAC46       <------ZmHOX2a(2) ---bZIP60(2)                              <---------At4g35610                     ------->TEIL ---O2                            <---------At4g35610        <---------ANAC58      --------->ARR14(2) ---TGA1a                         --------->ZAT14            <---------ANAC58   <---------WOX13(1) ---ANAC46                        --------->At4g35610--------->TOE2(3)       --------->ICU4 ===bZIP_DOF                      <---------ZAT14  ------->TEIL   <-----------TBP  <---------ARR14(2) ---->ALFIN1           ----------->HVH21*TSS --------->ICU4 <-------TEIL     <---------YAB1   gggtttagccattgtttttgtgtctgtgatgcagactgcagagagagatgatgaacattagcttcgtgttttatagatgatgatggatccgtgaagcata  18084600                                               ------->GAMYB                                              --------->ANAC46                                              --------->ANAC58                                              --------->ANAC58                                            <---------DOF5.7(2)                                           <---------WRKY38(1)                                           <---------WRKY12                                          --------->DOF5.7(2)                                         <-----------HVH21                                         --------->TOE2(3)                                        ---                                         --------->TOE1(3)                                      -----                                         <-----------TGA1                                       -----                  <---------YAB1        --------->ANAC46                                        <----            --------->AHL20(2)        <---------DOF5.7(2)       <---------YAB1                  -----            --------->AHL20(1)       <---------WRKY38(1) --------->ANAC58                       -----            <---------AHL20(2)       <---------WRKY12    --------->ANAC58                       -----     ----------->GT1                 <---------WRKY45    --------->ANAC46                ----------->GT1   cgttttgttgtaaataaaatatacttgtagttttctgagtcaacgtcaacgccaatgccacgcatgcttattagttcttagaccattcgaaacgttacac  18084700    <-------MYC3    ------->MYC3                                 --------->ANAC58    <---------ARR11(3) -------->HVH21                                  --------->ANAC46    --------->ARR11(3) ---->ANAC58                         <---------ANAC58                <---------AHL20(1) ---->ANAC46                         <---------ANAC58   ----------->GT1 <---------AHL20(2) -----ANAC55(2)               ------>MYB83 --------->WOX13(1)<-----------GT1 ---->ANAC55(2)               ------>MYB46(1) --------->TOE2(2)      --------->AHL20(1)           <-- ---->ANAC55(1)              ----------->RAV1(1) --------->ANAC58 ------>MYB83         --------->AtLEC2 ---->ANAC58                --------->AtMYB61 --------->TOE1(2)   ------>MYB46(1) ------>ZmHOX2a(1) <   gtaacacgttgggaaattttcaaacaaacaccaacattttcgtttcaatctacgaaattggttaaaccaaatatttttttgttcctgtgatgcaaacatt  18084800                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                       --------->ANAC58                                           ----------->GT1             --------->ANAC58                                          --------->DAG2              --------->DAG2                                  <------MYB46(1)                 --------->HSFB2a(2)     ----------->GT1              ----------->GT1            <---------MYB46(3)   ---------->DOF2                <------MYB83      <------MYB46(1)  ---------->DOF2             ---- -------ANAC46         --------->AHL20(2)---------->DOF2  <-----------RAV1(1)            <----------DOF2 ---------ZAT6 <---------YAB1   --------->CCA1(2)   <------MYB83  <---------HSFB2a(2)   <---------ANAC46   tagtgtaaagaaaaattatcagagataaaatgagataggtgaaaaaagtatatttggtttttgtggttctaaaaagcaagaaactaagtgacttttactg  18084900                           <---------AHL20(2)                                          <-----------HVH21       <------NtERF2       --------->AHL20(2)                                 --------->ZAT14 ------>DOF2              --------->AHL20(2)                                  <---------ZAT14      <-   aaagtagtcgccaattggaaaacaaaaattaaaatatggtttgagtttgttatacaagataagtttaatcggtagaagcctgtagtcaatgtcaattggt  18085000  Previous    Next  AGI:  At2g43570.1    Description:  chitinase, putative. similar to chitinase, putative [Arabidopsis thaliana] (TAIR:AT2G43590.1); similar to chitinase class 4-like protein [Brassica napus] (GB:AAK62047.1); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726); contains InterPro domain Chitin-binding, type 1; (InterPro:IPR001002) Range:  from: 18083301    to: 18084540    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version