Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ----------->HVH21                                                                           --------->LBD16                                                                           --------->At5g28300                                                                           <-----------HVH21                                                                          <---------ANAC58                                                                          --------->DEAR3(1)                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                          --------->TGA1a                                                                         --------->ATERF1(1)                                                                        ------>NtERF2                                                                        <---------RAP2.3(1)                                                                        <---------ATERF1(1)                                                                       --------->DEAR3(1)                                                                       <---------DEAR3(1)                                                                      --------->RAP2.3(1)                                                                      --------->ATERF1(1)                                                                     <---------RAP2.3(1)                                                 <---------HSFB2a(1) <---------ATERF1(1)                                          <<<<<<<<<MYB98            <---------DEAR3(1)                                          <---------MYB52(1)        ------>ZmHOX2a(2)                                         <-------GAMYB            <---------ARR14(2)                 <------ZmHOX2a(1)       ===========================================MYC_MYB    <---------ANAC46                    <---------ANAC58          --------->ARR14(2) <---------MYB52(1)                     <---------ANAC58 --------->GLK1(2)--------->O2  <-----------HVH21 ---------RAP2.6(3)                 --------->ARR14(2)  --------->ARR14(2)<---------TGA1a -------------->AGL1                <---------ARR14(2)  <---------GLK1(2)<------NtERF2 ----------->GT1 --->SPL7  --------->ANAC58         <---------GLK1(2)   <---------ARR14(2)<---------O2<---------DEAR3(2) ->LBD16   --------->ANAC58 <---------ANAC58  <------ZmHOX2a(1)  <---------PCF2    <-----------HVH21 >ANAC46--------->ARR14(2)  <---------ANAC58  =============================HOX2a_HOX2a<---------MYB46(3)   gccgttgtgggaaacgcgaggaagacaatagcgagtcggattccgttaggaatcgtcggaatcggtgggatcggcgccgtgactcggtcgggtcaaaact  18079900                      --------->ANAC58                 --------------->AtSPL8                <---------ANAC58                <---------ANAC46                <---------ANAC58              <------MYB46(1)              <------MYB83             <---------AtMYB61             <---------MYB46(3)     <---------ZAT2<---------SPL7     <---------At4g35610     --------->At4g35610      <------ZmHOX2a(1)     --------->ZAT2--------->REM1(2)    --------->ARR14(2)--------->ANAC46       <---------MYB52(1)    <---------ARR14(2)--------->ANAC58     <---------ANAC58               --------->ICU4 ------>ZmHOX2a(2)--------->ALFIN1         <---------ANAC58   --------->ATHB12                    --- ====================================HOX2a_HOX2a     --------->ANAC46   ---------->DOF2      --------   tgatcggagctgcgattggtgtgtacgcgataggagttgctacttccgtttttctaagcctcactgattagaagaaaagattacgttgttgttcttgatt  18080000                     --------->GLK1(2)               <---------AHL20(2)          <---------AHL20(1)          <---------AHL20(2)          --------->AHL20(2)      <---------AHL20(2)                                --------->YAB1                 <---------WOX13(1)      --------->AHL20(2)                               <<<<<<<<<ARR1                 --------->ATHB12     --------->AHL20(2)  ----------->GT1------->GAMYB  <---------ATHB12             <---------YAB1 ------>At4g35610<-----------GT1      -------->P       <<<<<<<<<ARR2          ------->MYC3 ->ATHB12 --------->AHL20(1)      --------->TOE2(3)  --------->WOX13(1)       <-------MYC3     ------   tgctgaaattaataaattttaacaatcttgtttaaacatcaaccctatatttgaacaatcataaacttcaaactcttacatgtggtttgattgctaaaca  18080100                                                         ------->MYC3                                                         <-------MYC3                                                        <---------ANAC46                                                        --------->TGA1a                                                        <---------O2                                                        --------->O2                                                        ========================bZIP_DOF                                                        ========================bZIP_DOF                                                        <---------TGA1a                                                        --------->ANAC55(2)                                                        <---------ANAC55(2)                         -                                                        ----------->GT1               --------->AHL20(2)                                                     <------ZmHOX2a(2)                <---------AHL20(1)                                                    --------->ARR11(3)          --------->ANAC58    -                                                    <---------ARR11(3)          --------->ANAC58    -                                                ---------->DOF2               ---------->DOF2   -----    --------->ARR14(2)         --------->AGP1   ==================bZIP_DOF  ------>MYB83       <-----    <---------ARR14(2) ---------->DOF2   <---------At4g35610         <----------DOF2  --------->AHL20(1)   <---------CCA1(2)   ===========================================bZIP_DOF  ------>MYB46(1)    ------ --->YAB1            --------->CCA1(2)   --------->At4g35610       <---------------------WRI1  <-----   taaacatatctgtttaatccaagataaaagacagaactagtggagcttaaaaaagatcacgtgaaaaacgtctttacctacaaagcaatataatccagat  18080200 --------------->AGL15 <---------------AGL15 ---------------->AGL1 ---------------->AG              <-----------TBP                                    <---------ARR11(3) ---------------->AGL2         <---------MYB52(1)                                    --------->ARR11(3) ---->GLK1(1)              ------>NtERF2                            --------->AHL20(2)             -- ----ARR14(2)        <---------ANAC58                               <---------AHL20(2)   <-----------GT1 --->ARR14(2)        <---------ANAC58         <----------DOF2--------->LBD16       <---------TOE2(3) ----GLK1(2)     <---------HSFB2a(1)      <-----------GT1  <------NtERF2       --------->YAB1--------   ttgcccaatctagtagggactgttcgtgcctccgatatttgtagtttcctttttttttggctccgaatatttatttgatattaataagattttacaaaag  18080300           *TSS          <---------ICU4          <--------HAHB4          --------->ATHB12          --------->YAB1       --------->WOX13(1)     <---------ATHB12     ------------>CBF                                              --------->ANAC58   --------->WOX13(1)                                       --------->ANAC58                        - ------------>CBF<---------CCA1(2)                          --------->ANAC58                <-------- ------->At4g35610     <----------DOF2                ---------->DOF2 ---------->DOF2       <-------- -->DOF2 <---------ATHB12  ---------->DOF2  --------->ARR14(2)     --------->ANAC58      <-----------GT1   aagctcaatcaatcatttcatatcactttaaaagcagcaatgtccgaatacatctccaaagtaagcaataagcaaaggaaaatgaagtttgtttccgtct  18080400                                                                                  ------>MYB46(1)                                                                                  ------>MYB83                                                                                --------->MYB46(3)                                                                      <---------TOE2(3)                                                                 --------->AHL20(2)                                   <---------------AtSPL3        --------->ATHB51<---------ALFIN1 ----->ZmHOX2a(1)       ---------->ID1                         <----------DOF2<-----------GT1 -ANAC58             ------>ZmHOX2a(1)        ----------------->AGL3 <-----------GT1 -ANAC58  <---------CCA1(2)       <--------P------->TEIL  <---------At5g28300<-----------GT1 --------   tcctcgttctgtttatcttcttcctcgtcgttcttggtaagtactgaatctatatacagttactgcattatttacgatattacccactcttacaacctca  18080500                                                                                     --------->HSFB2a(1)                                                                                    <---------TOE1(2)                                                                               --------->TCP20                                                                            --------->ALFIN1                                                                          <---------ANAC58                                                                          <---------ANAC46                                                                          --------->O2                                                                          <---------TGA1a                         --------->CCA1(2)                   <---------ANAC58  --------->TCP15(1)                 --------->LBD16                             <---------ANAC58  <---------PCF2                --------->LBD16                          <-------GAMYB    <---------O2    --------->HSFB2a(2)               <------NtERF2                             ===========================MYC_MYB     -----               <---------LBD16                          <---------MYB46(3)--------->TGA1a --------->ANAC55(2)             --------->TCP16(1)       <----------ID1   <---------AtMYB61  <---------bZIP60(2)  ------         --------->At4g35610     ---------->DOF2     --------->ALFIN1 <------ZmHOX2a(1)   <---------HSFB2a(2)         <---------At4g35610 --------->ANAC58        <-----------RAV1(1)  <---------ANAC58<---------ANAC55(2) ->TOE2(3)   --------->PCF5  --------->ANAC58 <-------TEIL   <---------ANAC46 <---------DEAR3(2)-----   taacaatatgcagaggccccggagaagatagaagccaaagacgacaagttcatatgtgtggttgagtatggaggagacgtgggtccaacgttctgtaacc  18080600                      <------NtERF2                     <---------RAP2.6(3)                     <-----------HVH21                     ------>NtERF2  --------->At4g35610                    <---------bZIP60(1)                    <---------ANAC46<---------At4g35610                    --------->ATERF1(2)                                    ------->GAMYB                    ----------->GT1 --------->ZAT2              <---------ANAC46                    <---------ATERF1(2)                         <---------ANAC55(2)                    --------->bZIP60(1)                         <---------ANAC58                    --------->RAP2.3(3)  ---------->DOF2 --------->At5g28300                  <---------ZAT18  --------->ARR14(2)    <------NtERF2   -------->P            <---------O2           <---------ARR14(2)   ----------->GT1  --------->ANAC58          <-            --------->O2          <------NtERF2     --------->DAG2   --------->ANAC58             <-- ---->TOE2(3)------->MYC3        --------->LBD16  ---------->DOF2    --------->ANAC58            <--- --->ZAT6 <---------ALFIN1     <---------LBD16  ----------------->AGL1   --------->ANAC58        <--- ---->TOE1(3)<-------MYC3     --------->MYB52(1)<------NtERF2   <---------ANAC58      --------->YAB1   ctaaattcttccccacgttgtgccgtcaaaactgccggagcttcaaaggtgccaaaggcggtaaatgcgtgaagcaacccaaacacaaacatatcaagtg  18080700                                                                                        --------->ANAC46                                                 <---------MYB52(1)                    --------->SPL7                                            ------>MYB83                              --------->STY1(1)                                          <---------MYB111(1)                         <---------STY1(1)                                          --------->MYB46(3)                          <---------ALFIN1                                          <---------MYB46(2)                      --------->SPL7                                          <---------MYB59                         <------------------SPL14                                          --------->AtMYB61                     <-----------HVH21                                    <---------------AtSPL8                     ------->GAMYB                                    --------------->AtSPL3                    --------->MYB46(3)                                    --------------->AtSPL8                  --------->MYB52(1)                                    --------->DAG2                       --------->ANAC58                                   --------->ZAT14        --------->At4g35610 --------->DEAR3(2)          <---------ZAT6           ---------->DOF2        <---------At4g35610 <------------AtMYB77 --------At4g35610                 <---------ZAT14 <---------MYB46(3)    --------->ANAC58 --------DOF2                  --------->ZAT6 --------->MYB46(3)         --------->ANAC46 ------ANAC58               <---------ZAT14 ------>MYB46(1)            --------->MYB52(1) ------ANAC58---------->DOF2--------->ZAT14 --------->MYB52(1)    ------->GAMYB--------->DEAR3(1)   cttctgcgactactgtaaagacgactagacttcacagtaaagtaccaaaccgctggtttcagcttcaatcgccaaacgcaaccgtcccctacggccctaa  18080800  Previous    Next  AGI:  At2g43540.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN65294.1) Range:  from: 18079448    to: 18080040    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g43550.1    Description:  trypsin inhibitor, putative. Identical to Putative trypsin inhibitor At2g43550 precursor [Arabidopsis Thaliana] (GB:O22869); similar to trypsin inhibitor, putative [Arabidopsis thaliana] (TAIR:AT2G43535.1); similar to putative trypsin inhibitor I6 [Arabidopsis lyrata subsp. petraea] (GB:CAG15246.1); contains InterPro domain Scorpion long chain toxin; (InterPro:IPR002061); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 18080311    to: 18080982    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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