Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              =======                                                                                             <------ZmHOX2a(2)                                                                                            <--------                                                                                            ---------                                                                                       <---------ATHB12                                                                             ------->GAMYB  ---------                                                                            --------->MYB46(3)-------                                                                           --------->ANAC58 ---------                                        <----------ID1                     -------->P--------->WOX13(1)                            <---------AHL20(2)                    <---------MYB46(3)--------->AHL20(2)                        --------->AHL20(2)                    <-----------RAV1(1)   <---------AHL20(2)                    --------->AHL20(2)  --------->ANAC46      --------->ALFIN1     --------->AHL20(2)                   --------->ICU4     <-----------GT1       --------->ANAC55(2)  --------->YAB1       ----------->GT1  <---------AHL20(2)             <---------YAB1      --------->ANAC58 <--------   aaaacaactaggtataatgcgataatttaaataaacgtataaacgacatatgagtttgtgataagtgttggatgagcaaccaaaaataaatcaagatcca  18079000                                                                                     --------->At4g35610                                                                                    <---------DEAR3(2)                                                                                   <---------DEAR3(1)                                                                                  <------NtERF2                                                                                  --------->ATERF1(1)                                                                                 <---------RAP2.3(1)                                                                                 <---------SPL7                                                                                 <---------ATERF1(1)                                                                                <---------bZIP60(1)                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                <---------ANAC58                                                                                <---------DEAR3(1)                                                                           -------->HAHB4                                                                           <---------ICU4                                                                           --------->YAB1                                                                          <---------ATHB51                                                                          --------->ICU4                                                                        ------>MYB46(1)     --------->GLK1(1)                                                  ------>MYB83------>NtERF2 -TEIL                                                                 <---------------AGL15 ======================================================================================MADS_MADS -ARR14(2)                                                            <---------MYB46(2) >ARR14(2)                                                            <---------MYB59<------NtERF2 >ARR11(3)                                                            <-----------------AGL3 ---------->AGL3     --------->ANAC55(2)          <-----------GT1     --------->TOE2(3)<----------DOF2 >AGP1           --------->YAB1                  <---------AHL20(2)  <---------ANAC55(2)     <------- -ARR11(3)    ---------->DOF2                   --------->AHL20(2)   --------->ANAC55(2) --------->REM1(1)   ttaagagatttcatcgtaaagataagtgtttttttttttttttgatgcaattttatctcttactatacattacctaattatggcgtcggcttcaactttg  18079100                                                                             <---------YAB1                                                                            <----------DOF2                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                       <---------YAB1                                                                     --------->YAB1                                                                     -------->HAHB4                                                                     <---------ICU4                                              --------->At4g35610   --------->ICU4                                              <---------At4g35610   <---------ATHB51              <--                                             ----------->ARR10  --------->LBD16                 -----                                             --------->MYB52(2)<---------ANAC55(2)              -----                                         ----------->GT1       --------->ANAC46         <---------At4g35610                                --------->AHL20(2)             --------->ANAC55(2)      --------->At4g35610 ---DOF2                 <----------ID1 <---------TOE2(3)  <----------DOF2 ------>ZmHOX2a(2)    -----   tgttgaaactgtaaacccaaacaaaaaaaaacaaaaaaatatgaggttagatgcgacttcgctttccgtaattatgatctttattgttacagatgaacaa  18079200           --------->AHL20(2)        --------->YAB1       <---------YAB1                                                                         <------    <---------YAB1                                                                           --------    <---------AHL20(2)                                                                   <---------AHL20(1)   --------->AHL20(2)                           --------->YAB1                        --------->AHL20(2) -------ARR11(3)                               <---------YAB1                   <---------ANAC46 ---->ANAC58                       <---------AHL20(2)                    <---------ZAT14 --------->AHL20(1) ---->ANAC46           ----------->TGA1      <-----------GT1   <---------AHL20(2)     <---------AHL20(2) ---->ANAC58           ----------->HVH21     --------->YAB1 ----------->GT1     ----------->GT1  <---   gacatttttattataaaatacagaaatgacgaagaaattaatggtatttatcatatagtagatagtaaattagtgtgttctgtcgtaaaaaaatattaaa  18079300                            --------->ANAC46                            --------->ANAC58                       <---------------AtSPL8              <---------AHL20(2)                       <---------------AtSPL3             --------->AHL20(2)                     <---------ATHB12                     <---------AHL20(2)              <---------YAB1--------->ANAC58       <---------SPL7             --------->ARR11(3)                   <---------ANAC58                           --------             <---------ARR11(3)       ---------->DOF2--------->SPL7                       <---------- ---AHL20(2)--------->YAB1  <----------ID1     --------->DAG2                  <---------MYB46(3) ->AHL20(2)<---------ATHB12--------->SPL7     ---------->DOF2 <---------AHL20(2)         --------->AHL20(2) ------AHL20(2)--------->YAB1     ---------->DOF2 <---------ANAC58          --------->MYB52(1)-------   taatgtgttccaaatgatcataaatcatgtacgacaaaaagaaagtcataaagcgtccgattaatttatggctaaatccaacggttagaaattaacttca  18079400        --------->ALFIN1      <---------O2      --------->TGA1a      <---------bZIP60(2)      <---------TGA1a      --------->O2      <---------ANAC55(2)      <---------ANAC58      <---------ANAC58      <---------ANAC46      --------->ANAC55(2)      <---------ANAC55(1)     <-----------------------TaNAC69(2)    <---------TGA2(2)                                                      ---------->DOF2   ----------->HVH21                                              --------->ARR14(2)   ----------->TGA1           --------->GLK1(2)                   <---------ARR14(2) <------MYB83         ------------>CBF                           <---------GLK1(1) <------MYB46(1)      <------ZmHOX2a(2)           ---------->DOF2--------->GLK1(1) ->TOE2(3)           <---------ARR11(3)          --------->AHL20(2)      <-------TEIL             <-- -GT1----------->STF1--------->ARR11(3)   ----------->GT1       --------->ARR14(2)          --------- ----->CBF --------->ZAT18   <---------GLK1(2)  *TSS            <---------ARR14(2)      <------------   atttggtgacgtgtgaacaacaagatcaatagattctcggtgagaagaaaataaaagaaaaatggggatatcgggttcaaagcgagttacgacgattcta  18079500                                                                              --------->GLK1(1)     -                                                                           --------->LBD16          <                                     --------->SPL7                       --------->DEAR3(1)       <-                                 --------->At4g35610                     <---------LBD16    ---------        --------->LBD16          <---------At4g35610                <----------DOF2     -------->P--- -------MYB59         <---------ANAC46                             <---------ANAC58   ------>ZmHOX2a(1) >GLK1(2)             <---------ANAC58      --------->GLK1(2)      <---------ANAC58---------->ID1 <-- ---------WRI1        <---------ANAC58      ------->TEIL    --------->ANAC46<------NtERF2   <--------   tctaactcgcccgagtttgactcggcttgtgactcagcatacgacgaatctctctctcttgcacagcatgctttcgccggagttcgtccttaccagctcg  18079600           <---------ALFIN1          --------->DEAR3(1)          --------->RAP2.3(3)         <------NtERF2        --------->ABI4(1)        ------>NtERF2        <---------ATERF1(1)       --------->DREB2C(2)       --------->RRTF1(2)       --------->RRTF1(3)       --------->RAP2.3(3)       --------->DEAR3(1)       --------->ATERF1(2)       --------->RAP2.6(2)       --------->RAP2.3(2)       <---------ATERF1(2)      --------->DEAR4(2)      <------NtERF2      --------->RRTF1(1)      --------->ERF1      --------->RAP2.3(1)      --------->ORA47(2)     <---------RAP2.3(1)     <---------DREB2C(1)     <---------ATERF1(1)     <---------DEAR4(2)     ------>NtERF2     <---------At4g35610     --------->At4g35610     --------->ABI4(1)    --------->RRTF1(2)    --------->RRTF1(3)    <---------DEAR3(1)    <---------ALFIN1    --------->RAP2.3(3)    --------->RAP2.6(2)    --------->ATERF1(2)    --------->DEAR3(1)    --------->RAP2.3(2)    <---------ATERF1(2)    --------->ANAC46   --------->ATERF1(1)   --------->RAP2.6(1)   --------->RRTF1(1)   --------->RAP2.3(1)   --------->DEAR4(2)   --------->ORA47(2)   --------->ERF1  <---------At4g35610  --------->At4g35610  --------->LBD16  <---------ATERF1(1)  --------->ABI4(1)  ------>NtERF2                 <---------At4g35610 --------->ANAC46       --------->GLK1(2) --------->DEAR3(1)    <---------GLK1(2) -------->ATERF1(1)  --------->LBD16 ---------LBD16    <---------LBD16 --------ATERF1(1)--------->MYB52(1)                     --------->At4g35610                      --- >ZAT2--------->RAP2.6(1)--------->HSFB2a(1)           <-----------RAV1(2)                        <-- ------>ARR14(2) <---------ALFIN1                   <-----------GT1              --------->WOX13(1) -------ARR14(2)--------->MYB46(3)<----------DOF2  <---------ATHB12         --------->LBD16       <-- -ZAT2--------->ATERF1(1)<---------HSFB2a(1)       --------->MYB46(3)    ------>ZmHOX2a(1)        ---   tctccgccgccgcccacatccaccggaatctttccgctcttcgtttccctctaatcaccagatggctctcttctcctccgagtcaatcccaagtcgactc  18079700                                  <------NtERF2                                  <-------GAMYB                                 <---------MYB46(3)                                <---------ANAC46                               <------NtERF2  <---------ARR11(3)                               --------->ATERF1(1)                               <---------LBD16--------->ARR14(2)                               <---------At4g35610                              <---------ATERF1(1)                              <---------RRTF1(1)                              <---------DEAR4(2)                              ------>NtERF2   --------->ARR11(3)                              <---------ORA47(2)                              <---------RAP2.3(1)                              <---------ERF1  <---------ARR14(3)                             <---------DEAR3(1)                             <---------ATERF1(2)                             <---------DREB2C(2)                             <---------RAP2.6(2)                             <---------RRTF1(3)    <---------LBD16                             <---------RRTF1(2)=====================HOX2a_HOX2a                             --------->DEAR3(1)<------ZmHOX2a(2)                             <---------RAP2.3(2)====================HOX2a_HOX2a                            <---------ABI4(1) --------->ARR14(3)                          --------->O2        <---------ARR14(2)                            ---------                          <---------O2       <---------GLK1(1)                 <---------RAP2.6(3)          <---------At5g28300<---------RAP2.3(3)------>ZmHOX2a(2)             <---------ANAC46 ------         <-----------GT1  <---------TGA1a    --------->GLK1(1)               --------->ATERF1(1)    <       <-----------HVH21  ================MYC_MYB ------>ZmHOX2a(1)    --------->CCA1(2)   <---------LBD16      --------->ANAC46    --------->TGA1a  <------ZmHOX2a(1)        --------->ANAC58       <---------HSFB2a(2)     --------->LBD16     <---------LBD16==============HOX2a_HOX2a   --------->ANAC58       --------->HSFB2a(2) ------>ZAT2             <---------At5g28300----------->ARR10  --------->GLK1(1)<------NtERF2-------- -------ZAT2--------->DEAR3(1)<---------RAP2.6(1) <---------LBD16   --------->ANAC46      <---------ANAC46 -------At4g35610      ----------->HVH21===============HOX2a_HOX2a <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------>At4g35610     <-----------HVH21 <------ZmHOX2a(1)    <------ZmHOX2a(1)--------->DEAR3(1)  ---   agctctccgagtcaccgtctctcgagtcacggcggcggatgaggaggagatcctcgggcaagaggagttcaagaaatgggccgtcgaggttttcgcggaa  18079800                                                                            ----------->HVH21                                                                           --------->At5g28300                                                                           --------->LBD16                                                                           <-----------HVH21                                                                          <---------TGA1a                                                                          --------->TGA1a                                                                          <---------O2                                                                          --------->DEAR3(1)                                                                          --------->O2                                                                         <------NtERF2                                                                        ------>NtERF2                                                                        <---------ATERF1(1)                                                                        <---------RAP2.3(1)                                                                       --------->DEAR3(1)                                                                       <---------DEAR3(1)                                                                      --------->RAP2.3(1)                                                                      --------->ATERF1(1)                                                                     <---------RAP2.3(1)                                                 <---------HSFB2a(1) <---------ATERF1(1)                                          <---------MYB52(1)        <---------DEAR3(1)                                          <<<<<<<<<MYB98            ------>ZmHOX2a(2)   <-----------HVH21                                         <-------GAMYB            --------->ARR14(2)   ----------->GT1                 <------ZmHOX2a(1)       ===========================================MYC_MYB    <---------ANAC46                    <---------ANAC58          <---------ARR14(2)  <---------DEAR3(2) <---------MYB52(1)                     <---------ANAC58 --------->GLK1(2)<---------ANAC58 >ANAC46   --------->ANAC58         <---------ARR14(2)  <---------GLK1(2)--------->ATERF1(1) --->SPL7  --------->ANAC58         <---------GLK1(2)   <---------ARR14(2)<---------ANAC46 ---------RAP2.6(3)                 --------->ARR14(2)  --------->ARR14(2)<---------ANAC58 ->LBD16--------->ARR14(2)  <---------ANAC58  =============================HOX2a_HOX2a<---------MYB46(3) -------------->AGL1        <---------ANAC58  <------ZmHOX2a(1)  <---------PCF2    <-----------HVH21   gccgttgtgggaaacgcgaggaagacaatagcgagtcggattccgttaggaatcgtcggaatcggtgggatcggcgccgtgactcggtcgggtcaaaact  18079900  Previous    Next  AGI:  At2g43540.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN65294.1) Range:  from: 18079448    to: 18080040    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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