Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------------->AGL15                                              <---------------AGL15                                              <---------DAG2                                              <----------DOF2                                             ----------------->AGL3                                          <---------WOX13(1)         ------>MYB83                    <---------ANAC58          <---------AHL20(2)         ------>MYB46(1)                 <---------ANAC58         --------->AHL20(2)       <---------MYB59                  --------->ATHB12      <---------TOE2(3)       <---------MYB46(2)             <---------WOX13(1)  <-------GAMYB       <---------MYB111(1)      --------->AHL20(1)       <---------MYB46(3)    <------ZmHOX2a(1)          --------->AHL20(2)        <------MYB46(1)    XXXXXXXXXXXXXXXXXXXX>MIR165A/B  --------->ATHB12     <------MYB83         <---------ANAC58    XXXXXXXXXXXXXXXXXXXX>MIR166A-G <---------YAB1        ----------->GT1      <---------ANAC58   tgtataggacctaacttcatacccatttttcaaatatatgattgattgccttatgtagttggttaacatttaatacattttcttgacaattcatattttt  18048200                                        <---------AHL20(2)                                      <----------DOF2                                   <---------ARR11(3)                                   --------->ARR11(3)                                 ------>MYB83               <---------ANAC58                                 ------>MYB46(1)            <---------ANAC58                               ------->GAMYB            <----------DOF2                       <------        ---------->DOF2       --------->MYB46(3)     <-----------GT1  <-----------GT1   <---------AHL20(2)   gaaaaaacttcaaagcattccttcaggcttcaaccaagctcttttatttctgaaatcactttccttgcatttttacatgagaagacatgttttatttaac  18048300                                                          <---------DAG2                                                      --------->WRKY12----------->GT1                                                     <---------MYB52(1)                                                     --------->DOF5.7(2)       <----------ID1                               <---------RAP2.6(3)     <---------------AtSPL8                         <-------GAMYB  ---------->DOF2    --------->DAG2                           <-----------RAV1(1)  ------>ZmHOX2a(1)   ---------->DOF2                       <---------ALFIN1 --------->TOE2(3) -----GT1                           <---------At4g35610<---------DOF5.7(2) --------->ICU4   ---------   caaaaaaaagggacataacatttgctagtttgtattttcgctcacacttgttgccgttaacctttttcctaaaggtaattagtttttcttcgtttagata  18048400                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                              <---------WOX13(1)                                                                             <------------CBF                                                --------->DEAR3(2)         <---------AHL20(2)                                       --------->ATHB12                    --------->AHL20(2)                                       --------->ATHB51                <---------AHL20(1)           -                                       <---------ICU4      <---------DAG2 --------->AHL20(2)        <                                      <---------YAB1       <----------DOF2<---------AHL20(2)     ----                                    --------->YAB1       ------->TEIL  --------->AHL20(1)       -----            --------->ANAC58     --------->ANAC58 <---------DDF1       <---------AHL20(2)     ------>MYB83  <---------AHL20(2)             --------->ANAC46--------->DREB2C(2)   --------->AHL20(2)   <--------  --------->AHL20(2)             --------->ANAC58----------->HVH21    <---------AHL20(2)    <-------- --------->AHL20(2)   ----------->GT1 --------->ICU4 --------------->AtSPL8--------->AHL20(1) ------>MYB46(1) -->GT1     --------->ANAC58 <-----------GT1 ----------->HVH21        --------->AHL20(2) <-----------GT1   aaaaaaaatttggaacgcattgagatgtgaattacaagtcataattggtgaccgacatgtactttttctcaaataaattaattgaacgaaattaccaaac  18048500              --------->GLK1(1)             --------->ARR14(2)                                  ------>NtERF2     <---------MYB52(1)                                          ----------->RAV1(1) -------->ARR14(2)                                            *TSS ---------ARR14(2)                                        --------->MYB46(3) ----->AtMYB61--------->CCA1(2)                 ---------->DOF2 --------->ETT(2) ------------>AG       ---------->DOF2        --------->YAB1 --------->ANAC46                 ------- -MYB46(2)   <---------ARR14(2)      <---------TOE2(3)  --------->ARR14(2)                <------ZmHOX2a(1) -MYB59      --------->ARR11(3)      <---------TOE1(3)  <---------ARR14(2)      ---------->DOF2   caaaaccggttttcagatatacacttaaagtcgatatttaagggtttatcaaaagtcagaaccacgacgacagacaaaacataaaagatggaggaagaaa  18048600                                                             <----------DOF2                                                           <---------ANAC58                                                           <---------ANAC58                                                        <---------WOX13(1)                                                        <---------GLK1(1)                                                       <---------ANAC58                                                       <---------ANAC58                                                    <---------TOE1(2)      ------>ZmHOX2a(1)                                                  <---------ANAC58        --------->TOE2(3)    --------->ZAT6             <---------ZAT2     <---------ANAC46    --------->WOX13(1) --->DOF2 --------->ZAT6     --------->LBD16      <---------ANAC58  <---------ATHB12   gagaaaacactaactctatctacatagtttccgagctacttgaagaaattttccttggattgcctttgaaatcaatcctcaaattcaaaaccgtctcaaa  18048700                                                                          ------>ZmHOX2a(1)                                                                      --------->ARR11(3)                                                                      --------->GLK1(2)                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                  --------->LBD16                                                                 --------->ANAC58              --------->LBD16                                    --------->LBD16              ------>ZmHOX2a(1)                                  --------->ANAC46              <---------HSFB2a(2)                                --------->ANAC58              --------->HSFB2a(2)         <------NtERF2        ------>MYB83             <---------LBD16            <---------ANAC46       ------>MYB46(1)         --------->WOX13(1)             <---------ANAC58      --------->MYB52(1)       <------ZmHOX2a(2)      <---------ANAC46               <---------ALFIN1       <---------YAB1<--       ==============HOX2a_HOX2a        <---------ANAC58     --------->AtMYB61  <---------ANAC46  <--      --------->ARR11(3)      <---------ANAC58              --------->MYB46(3) <---------At4g35610---      <---------ARR11(3)      <---------ANAC58        ---------->DOF2--------->GLK1(1) --------->TOE1(2)   acaatggagatcaatcctggaatcgaacttgttcgtggagaggcgtagaactcttcaaaagaaccacccgaaaatcctggctgcttataactgcgactac  18048800            --------->ARR14(2)            <---------ARR14(2)                                                 ------->GAMYB           <---------GLK1(1)                                                 -------->P           --------->GLK1(1)                                             --------->ANAC58        --------->LBD16                                                  --------->bZIP60(2)        <------NtERF2                                                    --------->ANAC58       <---------ANAC46                                                  --------->ANAC55(2)      --------->ATERF1(1)                                                <---------ANAC55(2)     ------>NtERF2                                                       --------->ANAC46     <------NtERF2                                                       --------->ANAC55(1)    --------->DEAR3(1)                                                   --------->AtLEC2  ------->PIF5                                                          ------>NtERF2  ------->MYC2                                                       ------>NtERF2  ------->MYC3                                                      --------->bZIP60(2)  <-------MYC2                                                      <---------bZIP60(1)  <-------MYC3                                                      --------->DEAR3(1)  <-------PIF5                                                      --------->ANAC58 --------->ANAC58                                 ------>ZmHOX2a(2) --------->ANAC58 --------->ANAC46                                <------ZmHOX2a(2)  --------->bZIP60(1) --------->ANAC58                               <---------ARR11(3)  --------->ANAC46 -------ZAT18                                   --------->ARR11(3)  --------->O2            --------- -------ZAT14                         <----------ID1  <---------CCA1(2)<---------ALFIN1 <---------ANAC58 ------>ZAT14   ------>ZmHOX2a(1)   <XXXXXXXXXXXXXXXXXXXXXMIR831--------->DEAR3(2)      <---------ANAC58   tgcacgcggccgggtatcctccctaagtctcagttcgaaggggacgaagagatcgtttatcttcataccgacgccacgcaaccctcgatgacttgcgacg  18048900                        <------MYB83                        <---------MYB46(3)                        <---------DEAR3(2)                        <------MYB46(1)                       <---------AtMYB61                                              ----------->GT1                       --------->MYB111(1)                                       --------->AGP1                      <--------P                                                 --------->ARR14(2)                ------->TEIL                                                     <---------ARR11(3)                --------->GLK1(2)                                       <---------LBD16               ------>MYB46(1)                                        <---------REM1(2)               ------>MYB83                       --------->LBD16--------->GLK1(1)   --------->LBD16             --------->DEAR3(1)                   ----------->HVH21   -------->P <---------ARR14(2)             <---------MYB52(2)                 <---------LBD16 <---------ARR11(3)  <-----------RAV1(2)             <---------MYB46(2)                 --------->ANAC46--------->ARR11(3)--------->CCA1(2)        <-----------HVH21   <---------WRKY12  <---------ALFIN1 --------->HSFB2a(1)<------ZmHOX2a(2) < -->HVH21    --------->MYB46(3)        ------->TEIL         --------->LBD16      --------->ARR11(3)--   gtttagtctgcatcaccgaacctggttggttcaacgttttgaacgtctccaccggacaactccgaagatttctacccggtccagatccaggtaaattcta  18049000                                                                                                    -                                                                                                -----                                                                                                -----                                                                                             <-------                                                                                            <--------             <-----------HVH21                                                             <---------AHL20(2)            --------->ANAC46                                                           <---------AHL20(2)   <-----------GT1   --------->AHL20(2) --------->AHL20(2)                            --------->AHL20(2) ---------YAB1 --------->SPL7     <---------HSFB2a(2)           ----------->GT1       <---------AHL20(2) ------->AHL20(2)   --------->YAB1--------->HSFB2a(2)<-----------GT1                 <---------WOX13(1)   atattatactttctccgtcccataaaaattgattttttagaaaaaaatagaagttttacattggaaatgtaaaacttagaacagttgatttattttaacc  18049100  Previous    Next  AGI:  At2g43445.1    Description:  Identical to F-box/Kelch-repeat protein At2g43440 [Arabidopsis Thaliana] (GB:Q0WRU9;GB:O22858;GB:Q56YI6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G43440.1); similar to F-box domain containing protein [Brassica oleracea] (GB:ABD65166.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 18048562    to: 18050163    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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