Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ARR14(2)                                                       --------->ARR14(2)                                            --------->ICU4     --------->TOE2(3)                                       <---------HSFB2a(2)     --------->YAB1                           ----------------->AGL1      <---------ARR11(1)                  <---------ZAT6       <------MYB46(1) --------->ARR11(3)            --------->ARR11(3)         ----------->GT1 <---------ARR11(3)  ------->GAMYB--------->ICU4            --------->AHL20(1)         <------MYB83   <---------GLK1(1)   <---------MYB52(2)           --------->AHL20(2)         --------->MYB46(2)    <---------CCA1(2)------->TEIL<---------AHL20(2) ------>DOF2<---------AHL20(1)        --------->MYB59 <---------CCA1(2)   --------->MYB46(3)       <-   aaagttgaagaaaatatatagagttcaataccaaaatagttcggtaagaattgtgcatatctctatcttattgacaacgaaccatttgtatttattgtat  18046000                                     <-------GAMYB                         <---------ANAC58                         <---------ANAC46     <---------AHL20(2)                     <---------WOX13(1)      --------->AHL20(2)                   --------->ATHB12 <------MYB46(1)               --------->AHL20(1)   <---------MYB46(3)              --------->AHL20(2)    <------MYB83                      <---------TOE2(2)       <----------DOF2   <---------ANAC58<---------TOE2(3)  <-----------GT1                       --- --------GLK1(2)  <---------YAB1    ----------->GT1    <----------DOF2<---------TOE1(2)  ---------->DOF2   agaacctcactttcaaatatatgattggcttatgtagttggttaacatttaatacatctttttgacaattcatatgtttttaaaaaaacttcaaagcatt  18046100                                                                 <---------ANAC46                                                           <---------YAB1                <---------TOE2(3)         <---------ANAC58                              <------ZmHOX2a(1)               <---------AHL20(2)         <---------ANAC58                             <----------ID1             ----------->GT1 <---      <----------DOF2<----------DOF2                --------->DAG2            ---------->DOF2    ---- ------>TOE1(2)   <-----------GT1                  ---------->DOF2           ------>ZmHOX2a(1)  -----   ccttcgacctttcttgcatttttctttacatgagagacatgttttatctaacaaaaaggacataatagtgtgtattttcctaaaggtaattaagtttttc  18046200                                                                  --------->KAN4(2)                                                            <-------MYC3                                                            ------->MYC4                                                      --------->DREB2C(2)                   <--------                                                      ----------->HVH21                     ---------                                            --------->ATHB12<-------MYC2    --------->AHL20(2)      <                                           <---------YAB1   ------->MYC2    <---------AHL20(2)      <         <----------DOF2     --------->ANAC58        --------->DEAR3(2)     --------->AHL20(1)   <--- ------------AGL15           --------->ANAC58     ----------->HVH21        <---------AHL20(2)<------- ----------->AGL15  --------->AHL20(2)   --------->YAB1<---------DDF1--------->TOE2(3) --------->AHL20(2) ---->TOE2(3)   --------->AHL20(2)     <---------ANAC55(2)  ------->MYC3   --------->AHL20(2)--------   ttaattcagaactttagattaaaaaaatcgaacgcattaacaagtatcattggtgaccgacatgtgcttattctcaattaaattagtaattgaataaaat  18046300        --------->ARR14(2)           --------->DEAR3(1)        <---------ARR14(2)    ------->GAMYB     --------->AtMYB61      <---------At4g35610    ----------------->AG    --------->At4g35610  ------>MYB46(1)          --------->MYB52(1)  ------>MYB83          --------->ANAC46 -AHL20(2)              --------->ANAC58 >AHL20(2)              --------->ANAC55(1) ---------MYB46(2)      --------->ANAC55(2)     ---------->DOF2                 ----------->RAV1(1) ---------MYB59         <---------ANAC55(2)  <-----------TBP                   --------->ANAC58 --------GT1            --------->ANAC58<---------ETT(2)   --------->YAB1      --------->ANAC46 --AHL20(2)          --------->ARR14(2)<------NtERF2----------->GT1            --------->ANAC58 ->AHL20(2)  <---------MYB52(1) ---------->DOF2<---------AHL20(2)     --------->GLK1(1) *TSS   ------   taccaaaccaaaaccggttttcagacacgcaactgaaagccgtcgatatttaaagggtttatcagaagtcagaaatctagcacgacagacaaaacataaa  18046400                                                                          <---------ANAC58                                                          <---------CCA1(1)                                                         <---------ARR14(2)                                                         <---------ARR11(3)               --------->LBD16         ---------->DOF2                   --------->LBD16<---------RVE1(1)          --------->WOX13(1)     <------ZmHOX2a(1)                    --------->HSFB2a(2)             <---------ANAC58------>ZmHOX2a(1)    ----------->GT1          --------->ARR14(2)          --------->ARR11(3) <----------DOF2 ---->DOF2         --------->ZAT6         <---------HSFB2a(2) <-----------GT1      <---------ATHB12   agatggaggaaaaaagagaaaacactaactcgatctacatagttcccgagctattggaagatattttccttcgattgcctttgaaatcaatcctgaaatt  18046500                                                              <---------KAN4(2)            <---------ZAT2                                                              --------->ARR14(2)           --------->ZAT2                                                          --------->LBD16            <---------ARR14(2)                                                         <---------ANAC46            --------->GLK1(2)                                                         <------NtERF2       --------->MYB52(1)                                      <XXXXXXXXXXXXXXXXXXXXMIR2934          --------->DEAR3(1)                             --------->LBD16            ------>NtERF2       --------->AtMYB61                             --------->HSFB2a(2)        <---------LBD16     <---------ALFIN1                             <---------HSFB2a(2)       <---------ANAC58    <---------ABI4(2)                             ------>ZmHOX2a(1)         --------->ALFIN1    --------->MYB46(3)                            <---------LBD16            <---------ANAC46--------->ANAC58    <---------At4g35610                      <------ZmHOX2a(2)                <---------ANAC58--------->ANAC58  ------>ZmHOX2a(1)                      ==============HOX2a_HOX2a     --------->ALFIN1 ---------->DOF2 --------->ARR14(2)                     <---------ARR11(3)      <---------ANAC58 <---------ARR14(2)     <---------ARR11(3)                     --------->ARR11(3)      <---------ANAC46 --------->GLK1(2) --------->LBD16     <---------ARR14(1) --------->WOX13(1)   <---------ANAC58--------->GLK1(1)<---------LBD16 -------   caaaaccgtatcaagacaatggagatcaatcctggaatccaagttgttcgtggagaggcgcgggaatcttcaaaagcaccaccggaaaatcctagctgct  18046600                                                                                        --------->ANAC58                                                                                        --------->ANAC46                                                                                        --------->ANAC58                                                                                       <------NtERF2                                                                                       ------>NtERF2                                                                                       <---------LBD16                                                                                       --------->LBD16                                                                                     <------NtERF2                                                                                    <---------RAP2.3(1)                                                                                    ------>NtERF2                                                                                    <---------ATERF1(1)                                                                                   <---------bZIP60(1)                                                                                   --------->ANAC58                                                                                   --------->ANAC46                                                                                   --------->O2                                                                                   --------->DEAR3(1)                           --------->GLK1(2)                                       <---------O2                           <---------ARR11(3)                                      <---------DEAR3(1)                           <---------ARR14(2)                              <---------ALFIN1                           --------->ARR14(2)                             --------->ZAT14     -------                       <------NtERF2                                      <---------REM1(2) -------->P                    ------>NtERF2                                         <---------ZAT14  <---------ALFIN1                  <---------RAP2.6(2)                                 <-----------GT1--------->ATERF1(1)                 <---------LBD16 ----------->RAV1(2)             ------>ZmHOX2a(2) --------->bZIP60(1)            <---------DAG2<---------CCA1(2)                     <------ZmHOX2a(2)  --------->ANAC58            <----------DOF2--------->ARR11(3)                  <---------ARR11(3) --------->ATERF1(1)        <---------MYB111(1)<-----------ARR10                   --------->ARR11(3)<---------ATERF1(1)   ------->GAMYB<-----------RAV1(1)                  <----------ID1  <---------CCA1(2)--------->DEAR3(1) -->At4g35610   =============================RAV   <XXXXXXXXXXXXXXXXXXXXXMIR831 ----------->HVH21   tacaactgcaactactttatgcggccgagtatcttccctgagtctcgtttcgaaggggacgaagagatcgtttatctacactgcgacgccgcgcaaccct  18046700                                             <---------TOE1(3)                                       <------MYB46(1)                                       ----------->GT1                                       <------MYB83                                       <---------MYB46(3)                                      <---------AtMYB61                                     <--------P                               ------->TEIL <---------DOF5.7(2)                               --------->GLK1(2)                           ------>NtERF2            -                              ------>MYB83  <-----------GT1                --------->LBD16        <--                            --------->DEAR3(1)                            <---------DEAR3(1) <-------                            <---------MYB52(2)                --------->LBD16             ------>NtERF2              --------->ZAT14 ------>MYB46(1)<---------TOE2(3)--------->At4g35610        --------->LBD16   <---------ANAC58         <---------MYB46(2)                <---------At4g35610        ------>NtERF2   <---------ANAC58    <-----------HVH21<<<<<<<<<<MYB80     --------->MYB46(3)         <---------LBD16 >GAMYB----------->HVH21    --------->MYB46(3)        ------->TEIL       <---------LBD16--------->LBD16   cgatgacttgcgacggtttactctgcatcaccgaacctggttggtttaacgttttgaacccatccgctggacaactccggcgattccctcccggcccagg  18046800                                                                            <---------PCF5                                                                            <---------ARR14(2)                                                                <-----------GT1                                                            --------->AHL20(2)                              <---------ANAC46             --------->ARR11(3)       <------ZmHOX2a(1)       ----------->GT1  <---------YAB1                     <---------AHL20(1)      --------->ANAC58      --------->DAG2 <---------YAB1           ---------->DOF2<---------ICU4 --------->ARR14(2)    ---------->DOF2 --------->TOE2(3)<---------ANAC58      <---------ARR11(3)      --------->ANAC58 ---------->GT1    --------->YAB1    <---------ANAC46      --------->AHL20(1)    <-----------RAV1(2) -----TEIL   <---------ARR11(3)      <---------ANAC58 <---------AHL20(2)    <------ZmHOX2a(1) ----RAV1(2) --------->ARR11(3) --------->MYB52(2)    --------->AHL20(2) <---------AtLEC2     <------   tccagtaaaaggtaaaatctaacattatagttgtttgtttcttgcagtgaaagaaattaaaaatatttacaacttgcaggaccgcaggaaaattggctat  18046900  Previous    Next  AGI:  At2g43440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G43445.1); similar to F-box domain containing protein [Brassica oleracea] (GB:ABD65166.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 18046388    to: 18047799    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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