Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------TOE1(3)                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)                                                                      ------->GAMYB                                                                    <---------TOE2(3)                                                                    <---------TOE1(3)                                                                   <-----------GT1                                                                   <---------DOF5.7(2)                                                                 --------->DOF5.7(2)                                                         =======================HOX2a_HOX2a                                               <------ZmHOX2a(1)<----------DOF2          ------->TEIL              <------ZmHOX2a(2)                =================================HOX2a_HOX2a             <---------ARR14(2)                ================================HOX2a_HOX2a             --------->ARR14(2)           ----------->RAV1(1)  --------->TOE2(3)      --------->ANAC58       ---------->DOF2     <---------CCA1(2)  ----------->GT1  --------->TOE1(3)      --------->ANAC58 ------HSFB2a(2)       <-----------HVH21--------->ZAT18  ======================HOX2a_HOX2a ----->HSFB2a(2)--------->WOX13(1) ---------->DOF2       <------ZmHOX2a(1)  <---------TOE2(3)   -----   tagataccaaaaaccgatccatcaatgtcatatctaacaaagtgcaacaggaaataagaggaaaacctttaacgatctgaggtttatcacgaacatcgac  18041800                      <------ZmHOX2a(1)                                            ----------->HVH21                   <------NtERF2                                                --------->TOE2(2)                  --------->LBD16                                               --------->TOE1(2)                  <------NtERF2                                                <---------HSFB2a(1)                --------->ATERF1(1)                                           ---------->TaMYB80                <---------LBD16                                               --------->GLK1(2)               <------NtERF2                 <---------ARR14(2)               --------->ARR14(2)               ------>NtERF2                 --------->GLK1(2)                <---------ARR14(2)              --------->DEAR3(1)             --------->ARR14(2)              <---------GLK1(2)              <---------PCF2  --------->ARR14(2)  <---------ARR14(2)         <---------ARR14(2)             <---------DEAR3(1)        <------ZmHOX2a(1)                     --------->ARR14(2)             --------->ATERF1(1)    <---------HSFB2a(2)                    --------->LBD16  --------->YAB1--------->SPL7<---------ARR14(2)  --------->ARR14(2)     <---------LBD16 <---------ZAT6<---------ATERF1(1)  --------->HSFB2a(2)               ----------->HVH21 ---->ANAC46 <---------RAP2.6(2)  ------>ZmHOX2a(1) <-------TEIL    --------->ALFIN1   gcagtgataagaagcgcggccggaggagagagcatcctcgaggagcgaatcggattcatcaagatggagagtgtgaccggaatctgcgactcggactgtc  18041900                                                             --------->ANAC58                                                             --------->ANAC58                      <-                                                            --------->SPL7                         <-                                                           <------ZmHOX2a(1)                       --                                                     --------->At4g35610                          ---                                                     ------>NtERF2                                ---                                                     <------NtERF2     <---------ANAC58       -------                                                     <---------At4g35610                      -------                                                   --------->SPL7  ------->MYC3    --------->GLK1(2)                           --------->ANAC58     --------->TGA1a    <-------MYC3    <---------ARR14(2)               --------->WOX13(1)<---------ETT(2)<---------SPL7   --------->O2     --------->ARR14(2)            --------->ANAC58    <------ZmHOX2a(2)<-----------HVH21<---------O2    <---------GLK1(2)--            --------->ANAC58    ==================================HOX2a_HOX2a   ----------->ARR10 <--     --------->LBD16       --------->ANAC58------->TEIL--------->DEAR3(1)   <---------At4g35610  <--- --------->ARR14(2)   <----------ARF1   <---------ATHB12------>NtERF2  <---------ANAC58       -------   cagtttccgagacgaagcaatctggagacaagcgatcgaccaatgaaccctcgtccgccgaggacgacacatgtcttgaggtgagaatcgccatggacgg  18042000 --------HSFB2a(1)                 <----------DOF2 --------HSFC1(2)                 --------->AGP1 ------->HSFB2a(1)               <---------ZAT2 ------>ARR14(2)                 --------->At4g35610 ------>GLK1(2)                  <---------At4g35610 -->ANAC46                       --------->ZAT2                           <----------ID1 -->ANAC58                     <---------ALFIN1              --------->At4g35610                ----- ------->HSFC1(2)           --------->ANAC46                 <---------At4g35610                ----- -------ARR14(2)        --------->AHL20(2)          <-----------HVH21  ---------->DOF2          <---- ------GLK1(2)     --------->DEAR3(1)       <----------DOF2<---------WRKY38(1)                  <---- -->ANAC58  <---------YAB1<-----------GT1  <---------DAG2  <---------WRKY12   <------NtERF2<------ZmHOX2a(2)   aatcttcgtccattgttatcgccgaattaaaccccagctctatcgccttttctcggtcgagtcaactcagagaaaaaggccgagtcgagttggatcagtg  18042100                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                           <---------YAB1                                   <---------GLK1(2)                                      --------->AHL20(2)                                 ----------->ARR10                                        --------->AHL20(1)                              ------>NtERF2           <----------DOF2                     <---------AHL20(1)                            <---------ANAC46         --------->TOE2(3)                    <---------AHL20(2)     --------->At4g35610    <---------ANAC58         <---------DAG2                      --------->YAB1   --------->DAG2           <---------ANAC58   --------->ANAC58                          <---------ICU4  ---------->DOF2      <---------AtLEC2        --------->ANAC46            *TSS <---------DEAR3(1) ---->ZAT18            <---------ANAC46        --------->ANAC58     <----------DOF2     <---------YAB1 ---->ZAT14            <---------ANAC58  <---------ALFIN1   <---------ANAC58   <---------At4g35610 -----ZAT18            <---------ANAC58 --------->ZAT14     <---------ANAC58   --------->At4g35610  < -----ZAT14         <--------P<------NtERF2   <---------LBD16      --------->TOE2(3)    --------->ICU4   cacaaaaagctgaatactaggggttgcttggcgggcagactctccactcgcgcaaccttttagcgttttcctttattcttcggctgtgtaattataattt  18042200                                                                       <---------MYB46(3)                                                                      <---------TOE2(2)                                                                      <---------TOE1(2)        <---------DAG2                                              <---------ANAC58        <----------DOF2                                        <---------ICU4   <-----------GT1                                             -------->HAHB4 -----AHL20(2)                                                --------->ICU4 --->AHL20(1)                                              <---------AHL20(2) ----AHL20(1)                                       <-----------GT1 <---------ANAC58 ----AHL20(2)                              <---------TOE2(3)--------->YAB1 --->AHL20(2)                            <---------AHL20(2)<---------YAB1                 ---------->DOF2 ---------ICU4                     XXXXXXXXXXXXXXXXXXXX>MIR778<---------YAB1       --------->GLK1(2)   aatattcacacttttttgccataaatctatggatttgacttaatttatgtaaattatctgtataattattccttggttacaaacaaatctagtaaagcta  18042300                                                                --------->TOE2(2)                                                                --------->TOE1(2)                                                               --------->YAB1                                                             ------>MYB83                                   <------MYB83              ------>MYB46(1)                                   <------MYB46(1)         <---------MYB111(2)                      <---------ANAC46                     <---------MYB46(2)                      <---------ANAC58                     <---------MYB111(1)                  <-------GAMYB    <---------ANAC46        --------->MYB46(3)                --------->ANAC58  --------->MYB55(2)       <---------MYB55(2)                --------                --------->ANAC58  <---------MYB46(3)       --------->AtMYB61                 --------              ------------>AtMYB77--------->MYB46(2)      --------->ANAC46               <------MYB46(1)             <---------SPL7       <---------AtMYB61   <<<<<<<<<GATA-3                 >>>>>>>>>CBP60g            --------->ANAC58     <---------MYB55(1)   <<<<<<<<<GATA-4     --------------->AGL15            --------->ANAC58    <---------MYB52(1)    <<<<<<<<<GATA-1     <---------------AGL15            --------->ANAC46<-----------GT1           <<<<<<<<<GATA-2 --------->GLK1(1)  <------MYB83  <---------AHL20(2)  <---------ANAC58              --------->WOX13(1)<---------GLK1(1) --------->MYB59 --------->AHL20(2)<---------MYB52(1)             <---------ATHB12 <---------YAB1     >>>>>>>>>SARD1   atattaaatcgtagacgcacggttgcgttttcacgtttggtgagccaattccatcaatccaccaaacatatgatttccattgttagaaatttggtaagca  18042400                                                                                      <--------ATHB1                                                                                      -------->HAHB4                                                                                      <---------ICU4                                                                                      --------->ATHB12                                                                                      --------->ATHB51                                                                                     <---------ATHB51                                                                                     --------->ICU4                                                                                     <---------YAB1                                                                                     <---------AHL20(2)                                                                                   --------->YAB1                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                 <---------AHL20(1)                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(1)                    ------->TEIL                                              <---------ICU4                    <-----------ARR10                                        <---------YAB1                    --------->ARR14(2)                                       --------->ICU4                    <---------ARR11(1)          <---------REM1(1)          --------->YAB1                    <---------ARR14(2)      ------->TEIL --------->YAB1--------->GLK1(2) ->ANAC58          <---------ARR14(1)   ------->TEIL     <---------ICU4--------->ARR11(3) ->ANAC58          <---------CCA1(2) <---------ANAC46   <-------TEIL   <---------ARR11(3)           -   cttgtagagagaaactaaaccgtatctatctatacacttgtgtatgtatgttgaagcattcattacacttgaaaatctcataatttaataattgagttta  18042500                                                                                       <---------At4g35610                                                                                       --------->ZAT2                                                                                       <---------ZAT2                                                                                 <----------DOF2              <---------AHL20(2)                                                <---------ICU4            <---------RVE1(1)                                                   ------>ZmHOX2a(2)           <---------ARR11(3)                                                 <---------ARR11(3)   <-           --------->ARR11(3)                                                 --------->ARR11(3)   <-           <---------GLK1(2)                                            <---------AHL20(2)     <-----         <---------TOE2(3)                  <---------YAB1              <---------AHL20(1)   --------    <---------AHL20(2)                    --------->YAB1                --------->ARR11(3)  <--------    --------->AHL20(2)                   <---------ATHB12               --------->AHL20(1)  --------- -------->AHL20(2)           --------->ANAC46        ---------->DOF2 --------->AHL20(2)--------->At4g35610   aactaaatatttagatttttttgtgttgaatacacaacttcaaatgataactgaagaaagcccaaaacatataaaatattgatctttgcagctgatgatt  18042600                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                     <---------At4g35610 --------->AtLEC2                                                  <---------ARR14(2)--------->At4g35610 --------ANAC58                                                    --------->ARR14(2)<---------ZAT2 --------ANAC58                                      ------>ZmHOX2a(2)               --------->ZAT2 ----WOX13(1)                                       <------ZmHOX2a(2)    --------->ANAC46   <--------P ->ATHB12                                           <---------GLK1(1)    --------->ANAC58  <-------GAMYB -YAB1                           --------->ANAC46  --------->ARR11(3)    --------->ANAC58 <---------- >ICU4    <-----------GT1--------->AHL20(2)        <---------ARR11(3) --------->ANAC46    <---------MYB46(3)   gacttgcaaatttttctatacaaataagaaaatatacccaagttttcagaaacgatctctggctctctgtatacgacgcaatgcttcagcttcggttgct  18042700  Previous    Next  AGI:  At2g43420.1    Description:  3-beta hydroxysteroid dehydrogenase/isomerase family protein. similar to AT3BETAHSD/D2 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2), 3-beta-hydroxy-delta5-steroid dehydrogenase/ sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) [Arabidopsis thaliana] (TAIR:AT2G26260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16949.1); contains InterPro domain 3-beta hydroxysteroid dehydrogenase/isomerase; (InterPro:IPR002225); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Reticulon; (InterPro:IPR003388) Range:  from: 18038345    to: 18042175    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g43430.1    Description:  GLX2-1 (GLYOXALASE 2-1); hydroxyacylglutathione hydrolase. Identical to Hydroxyacylglutathione hydrolase 1, mitochondrial precursor (GLX2-1) [Arabidopsis Thaliana] (GB:O24495;GB:O22857;GB:O24494); similar to GLX2-4 (GLYOXALASE 2-4), hydroxyacylglutathione hydrolase [Arabidopsis thaliana] (TAIR:AT1G06130.2); similar to unknown [Populus trichocarpa] (GB:ABK93490.1); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279) Range:  from: 18042446    to: 18045332    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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