Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   --                                                                                               ------              ---------->DOF2              --------->At4g35610        --------->MYB52(1)      <------        --------->ANAC46              --------->ZAT14          ------>ZmHOX2a(1)             --------      --------->ANAC46                <---------ZAT14         --------->TOE2(3)              <-------      --------->ANAC58              --------->ANAC46  <-----------GT1 ---------->DOF2    --------->YAB1      --------->ANAC58            --------->ZAT6   --------->YAB1--------->AHL20(2)     <-------TEIL   acacagacacacaaaacaaagtcatttccccatctaacactaaacagttgcattagtaactagtccttaaaataaaggcactcgtctagattcattatct  18017300                                                                                            ------->TEIL                                                                                         <------ZmHOX2a(2) --------At4g35610                                                    <------ZmHOX2a(1) <---------ARR14(2) ------->At4g35610          --------->YAB1             <---------GLK1(2)                --------->ARR14(2) --->TOE2(3)               <---------YAB1            --------->ICU4   ==========================HOX2a_HOX2a ---YAB1             <---------AHL20(2)         --------->YAB1     --------->YAB1       <-----------ARR10 ->ARR11(3)         --------->AHL20(2)       --------->WOX13(1)  --------->GLK1(2)    --------->LBD16 --ARR11(3)  --------->AHL20(2)   --------->AHL20(2) <---------YAB1<---------ICU4   <---------LBD16 -   tagctaaattcgcattaaaacataaaattttcataaataaacatcagcaattagaatgattcttcagaatcaggactaaatatagacgcggatcaaccta  18017400                                                   ------->GAMYB                                                --------->MYB52(1)                                             --------->TOE1(3)                          <-----------HVH21                                          <-----------GT1                           <---------ALFIN1                                         --------->KAN4(2)                      --------->KAN4(2)                           <---------TOE1(2) --------->TOE2(3)                 <---------MYB46(3)             <---------ANAC58          <---------YAB1      <---------REM1(1)  <---------WOX13(1)             <---------ANAC58     <---------At4g35610   <-----------RAV1(1) --------->ATHB12    <----       --------->DAG2     ------>ZmHOX2a(1) ----------------->AGL1         <---------YAB1    <------- ---------->GT1   ---------->DOF2 --------->At4g35610 --------->GLK1(1)--------->ALFIN1--------->DEAR3(1)   gagtgtgaaaaattggcttctaaagttcctagtttaagctgattataccttaacggaaatgttgtagatggaagtggatgattgttccaccgtcgatggc  18017500                                                                                   <---------WRKY18(1)                                             ----------->GT1              --------->ZAT18                                      <---------------AGL15             --------->At4g35610       <---------ARR14(2)             --------------->AGL15           <--------P  ----------->HVH21--       --------->ARR14(2)           --------->ANAC58               <---------ZAT6<---------WOX13(1)==       --------->GLK1(2)            --------->ANAC58          --------->TOE2(3)--------->ATHB12  <---      --------->GLK1(1)           <---------ALFIN1    --------->AHL20(2)--------->ZAT2        <------      <---------GLK1(1)   ---------->DOF2---------->DOF2  <---------AHL20(2)<---------At4g35610  ---- -----ANAC46          <----------ID1--------->ANAC46  --------->AHL20(1)<---------ZAT2   <---------At4g35610 --DEAR3(1)    <---------ZAT6     --------->REM1(1)   <---------AHL20(2)<---------At4g35610   <------   gaagaagggtatctgtagaggtagaagacaaaggctacacccaaaaagagtataaattttttaatcttagaggtagctcgctgattgacccatctgcttg  18017600              ----------->GT1      <------NtERF2 ---->ZmHOX2a(2) =================HOX2a_HOX2a                                                *TSS ------ARR11(3)                                                ------>ZmHOX2a(2) ---WOX13(1)---------->DOF2                                   <------ZmHOX2a(2) ----->ARR11(3)                              <----------DOF2 <---------ARR11(3)                    <- ----DOF2  <------ZmHOX2a(1)   <---------MYB52(1)            --------->ARR11(3)                  <<<<   atctaggcatcgaggaaagaaaaaaaaaacacagttagtcttcttctctttggtgaacaagacgatctcagaagtcagaacagaacagaacaagcttgtt  18017700                                                                       ---------->DOF2            XXX        <---------ZAT6                     --------->ARR11(3)         <---------AHL20(2)         <--- --------ANAC46                            <---------ARR11(3)        <---------AHL20(2)          ---- <<<<<<WRKY63     <----------DOF2          --------->GLK1(2) --------->ANAC46                   -----   gacttggatagtgtttgaagctttaatgggcttaacatgggccaaaatctagttgataagtttacgcctaatttaaagcccatctcagccttgagagatt  18017800                                                                                                    -                                                                                        --------->MYB52(1)       <----------DOF2                                                             --------->ICU4   -       <---------DAG2               --------->YAB1                     <---------ARR11(3) <----------ID1 XXXXXXXXXXXXXXXXX>MIR773B    --------->ANAC58                --------->GLK1(1)    <---------YAB1 --- ------AHL20(2)               --------->ANAC58         <---------At4g35610        <---------TOE2(3) < ----->AHL20(2)        <---------AtLEC2           <----------DOF2      --------->ARR11(3)<---------TOE2(3) ---->AHL20(2)         --------->YAB1  --------->YAB1  --------->At4g35610       --------->MYB52(1) <   taattgcaacttttctcttcaattttcatgacactctagaataataagtttactttcagatgagaaatctagacatcttcgaataacgattaacgaaaaa  18017900            <-----------HVH21                  <---------ZAT14                          <---------ARR11(3)           ----------->GT1                     --------->ZAT14                          --------->ARR11(3) -------->bZIP60(1)                         <----------DOF2                            --------->YAB1 -------->TGA2(1)                         --------->ZAT18                             <---------YAB1 ------>YAB1--------->TOE2(3)             <---------ZAT14                           --------->YAB1 ---------GLK1(1)                ---------->DOF2         ------>NtERF2      --------->DAG2     <----- ---------bZIP60(1)  --------->AtLEC2     --------->ZAT14<---------ALFIN1  ---------->DOF2 <---------YAB1   tgatatcacaaaatcgtcaaaccatgctacatagtaaaagggactgctctatagtgtcccgactccaaacaaaaaaaaaaagtggataatgatattagtg  18018000                                                                                                    <                                                                                                    -                                                                                                <----                                                                                            <--------                                                                 <------ZmHOX2a(1)          ---------                <---------HSFB2a(2)                            <---------TOE2(3)            ---------                --------->HSFB2a(2)                        <-------GAMYB------>NtERF2       <--------      --------->ANAC58                                    <---------MYB46(3)     <---------ANAC58   <      --------->ANAC58          --------->YAB1           <---------ANAC46        <---------ANAC58 <-- --------->At4g35610<---------TOE1(2) --------->YAB1     <---------DEAR3(1)      <---------ANAC46 <-- ----ZAT6   <----------DOF2<---------YAB1                <---------RAP2.6(2)   --------->ARR11(3) <--   agaagcggaagcaactttctcgcagttttctgattcagaatcatcttcagagaaacttggcggtttaggaatgaggcctaatgtcttgaacatgagctgg  18018100                       ----------->GT1                      <---------AtMYB61                  <---------ANAC58                  <---------ANAC58                  <------MYB46(1)          --------->YAB1          --------->ATHB12          -------->ATHB1          <---------ICU4<-------GAMYB ---------At4g35610   --------->ALFIN1 -------->At4g35610 <---------ANAC46 -------HVH21     <------MYB83 -ZAT2   <---------YAB1<---------MYB46(3) >At4g35610       <---------ANAC46 >ZAT2  <---------ARR11(3)  ---------->DOF2                       --------->ANAC58 -At4g35610      --------->MYB46(2)                               --------->ANAC58 ------NtERF2    <---------AtMYB61            <---------YAB1   --------->ZAT2--------->ARR11(3) -------WRKY45   <---------MYB46(3)      --------->LBD16      --------->ANAC58 -------WRKY38(1)--------->MYB111(1)   <---------LBD16        --------->ANAC46 <---------ANAC58     - -------WRKY12--------->ATHB12  <---------GLK1(2)             --------->ANAC58 <---------ANAC58  ----   tcagcgtcaaaatcattgtttggtgtggttaaaagcttctctccggtgaagatagagtttgcaccagcaaggaaacagagagcttgttcggacattgaga  18018200  Previous    Next  AGI:  At2g43350.1    Description:  ATGPX3 (GLUTATHIONE PEROXIDASE 3); glutathione peroxidase. Identical to Probable glutathione peroxidase 3, mitochondrial precursor (GPX3) [Arabidopsis Thaliana] (GB:O22850); similar to ATGPX1 (GLUTATHIONE PEROXIDASE 1), glutathione peroxidase [Arabidopsis thaliana] (TAIR:AT2G25080.1); similar to phospholipid hydroperoxide glutathione peroxidase [Raphanus sativus] (GB:AAL55967.1); contains InterPro domain Glutathione peroxidase; (InterPro:IPR000889); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 18015719    to: 18017677    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g43360.1    Description:  BIO2 (BIOTIN AUXOTROPH 2); biotin synthase. Identical to Biotin synthase (BIO2) [Arabidopsis Thaliana] (GB:P54967); similar to biotin synthase [Brassica rapa subsp. pekinensis] (GB:ABI63585.1); contains InterPro domain Radical SAM; (InterPro:IPR007197); contains InterPro domain Elongator protein 3/MiaB/NifB (InterPro:IPR006638); contains InterPro domain Biotin synthase; (InterPro:IPR002684); contains InterPro domain Biotin and thiamin synthesis associated; (InterPro:IPR010722); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 18017828    to: 18020315    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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