Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------AHL20(2)                            <---------RVE1(1)                           <---------GLK1(2)                           --------->ARR11(3)  --------->ANAC58                         ----------->ARR10     --------->ANAC58                           --------->ANAC46                   ------->GAMYB           <---------HSFB2a(2)                           --------->SPL7                 --------->At4g35610       --------->HSFB2a(2)                         <---------SPL7                 <---------At4g35610  <----------DOF2         <-----------GT1       <---------------AGL15               --------->ETT(2)     ---------->ID1         ----------->GT1          ------>ZmHOX2a(1)        <---------AHL20(2) <---------ARR11(3)  --------->ANAC46                 <---------ALFIN1 ----   atcaatttgtttatttgtcaacagagttagatttttttgtcttttctcgacgcaatacaagaagttactcacttactctccaactcctccatacggtagc  18014400                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                        --------->YAB1                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                            <---------TOE2(3)                              ----------->GT1----------->GT1 ------>DOF2         <---------YAB1         <---------TOE1(3)      <---------At4g35610           <---   aaagtctagttctaaactacattttgatgaagaagtaagaattttcaaggttaatttataaaaatatgcagattacaaatcaaatgctaattttgtatgt  18014500                                   <---------HSFB2a(2)                                   --------->HSFB2a(2)                                        <------                              -------->HAHB4                                           ------->MYC2                              <--------ATHB1                                           <-------MYC2                              <---------ICU4                                        <---------ALFIN1                             <---------YAB1                                        --------->LBD16                           --------->YAB1          ----------->HVH21              --------->RAP2.6(2)                    <---------ANAC46     --------->DAG2                   <---------GLK1(2)--------->ALFIN1              --------->DAG2 --------->ICU4  <---------ZAT18          ------>ZmHOX2a(2)<-------MYC3    --------->SPL7  --------->ALFIN1   ---------->DOF2              --------->ARR11(3) ------->MYC3   --------->MYB52(1)     --------->ICU4--------->DAG2     --------->ATHB12--------->GLK1(2) -------- --------GT1 ---------->DOF2 <---------ATHB51--------->ZAT18<---------GLK1(2)     --------->DEAR3(1)   tacgcttacggctaaaaaagcggtgggaataataattcgcgaaaaggtgctctctgacgactgattcgttgatctagattctagccgcacatggtgggcc  18014600                <---------REM1(2)              --------->ARR14(2)              <---------ARR14(2)                  --------->YAB1       ------>NtERF2                     --------->AHL20(2)      ------>NtERF2                      <---------AHL20(1)      --------->LBD16      ----------->HVH21  <---------AHL20(2)                                  <--     --------->ANAC46   <-------TEIL     --------->AHL20(1)         --------->AHL20(2)  --------->ATHB12    <---------LBD16--------->ANAC46  <---------YAB1           <-------TEIL             --------->ICU4 ---PCF2      <---------ZAT14   --------->bZIP60(2)       <-------TEIL   --------->ATHB12     ------- --->TCP11(1) --------->ZAT14 <---------bZIP60(2)<---------YAB1  --------->ANAC46      <---------YAB1   atactctccggcccagtatacacacatccatgacatgtcatcatatattatatcataacatacatacacataaattgattagtgaccacatgattagaaa  18014700                   --------->LBD16                 <------NtERF2                ------>NtERF2                <---------SPL7                <---------RAP2.6(3)               --------->DEAR3(1)               --------->ATERF1(2)               <---------ATERF1(2)          <------------CBF         <---------ICU4         --------->ATHB51         --------->ATHB12         -------->HAHB4            <---------------AGL15         <------------ATHB5        --------------->AGL15        <---------AHL20(2)         <----------DOF2        --------->AHL20(2)   <-----------GT1        <---------YAB1    <---------ICU4  --------->ANAC58                               <----------DOF2        <---------ATHB51  --------->YAB1  --------->ANAC58                           <-----------GT1        --------->ICU4   <---------YAB1  --------->DAG2                             <-----------GT1<-      --------->YAB1     --------->ICU4 ---------->DOF2                 <----------DOF2 --------->TOE2(3) --------ID1  <---------RAP2.6(2) <-----------------AGL3   <----------DOF2*TSS  <----------DOF2<----- --->DOF2<--------ATHB1--------->YAB1----------->TBP  <<<<<<<<<TBF1     <---------DAG2  <---------DAG2   gagacaaaaaataattgccgcccgataataataacttctttataaagcaactcttcttcttctttctctcttcactttctctctttttaacctttttcta  18014800                                                          <-----------GT1           --------->At4g35610                                                       <---------ARR14(2)           <---------At4g35610     <----------DOF2                                   <---------GLK1(2)        --------->ANAC46     <---------DAG2                                    --------->ARR14(2)     ------>ZmHOX2a(1) ----------GT1                   --------->ZAT14       <---------ARR11(3)    --------->TOE1(2) ----YAB1                  --------->MYB52(1)          --------->ARR11(3)    --------->TOE2(2)    <--   attaccactttcttctccatatacaaaaaaaacagagaactcacaatgtgcgattcagattttctctctcgttgctcttcctacgaagcagacgttgatt  18014900                                                     <------ZmHOX2a(1)                                              <---------ARR14(2)                                              --------->ARR14(2)          ------>ZmHOX2a(2)                   ------->TEIL         <------ZmHOX2a(2)                --------->At5g28300        --------->ARR14(2)               ----------->GT1        <---------ARR11(3)             --------->ZAT14                      <---------AtMYB61   -----        <---------ARR14(3)             --------->SPL7=================HOX2a_HOX2a               -----        --------->ARR14(3)             <---------ZAT14        --------->ARR11(3)              -------        --------->ARR11(3)           <---------SPL7<---------TOE2(3)       <XXXXXXXXXXXXXXXXXXXXMIR171A        <---------ARR14(2)  --------->ARR11(3)--------->GLK1(2)<------ZmHOX2a(2)            <-------- -------ETT(1)  --------->AtMYB61  <---------------AtSPL8     <---------ARR11(3)     --------->ZAT14-   ccgacagcgagatctcgacctccagtttcagttcttgttcgtacagtgaatctgaggaagaagagatcaacaatggttttggtgttgttcagtcgaagaa  18015000                                                                         --------->ATHB12                                                             --------->ZAT2                                                             <---------ZAT2                                                             <---------At4g35610                                                             --------->At4g35610                                                           <-----------RAV1(2)        --------->GLK1(2)                                 <-------TEIL  <---------YAB1 ---->ANAC58                                    --------->ANAC55(2)     --------->ICU4 ---->ANAC58                                    <---------ANAC58      --------->YAB1               <- --->DOF2                                       <---------ANAC58     --------->ICU4                -- -------------WRI1                              <---------ANAC46--------->At5g28300               --- -------->MYB52(1) >>>>>>>>>TBF1   <---------MYB46(3)   <---------ARR14(2)                      -----   gcaaacgaagaaactggagaagaagaagagtaatgtgttgttagaaggttacgttgtagattcagctgtgaatgatgatttgaagagaaccaagagttta  18015100                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                   ================================HOX2a_HOX2a                                   --------->CCA1(2)                                  <---------ARR14(2)                                  --------->ARR14(2)                     --------->MYB52(1)   --------->ALFIN1         =============HOX2a_HOX2a <---------AGP1         ------>ZmHOX2a(2)        --------->ARR11(3)            --------->GLK1(2)       --------->ARR11(3)         <---------ARR11(3)          <---------HSFB2a(1)       <---------ARR11(3)    --------->ALFIN1                 --------->HSFB2a(1) <---------------------WRI1<---------ANAC46                 <------ZmHOX2a(1) --------->SPL7    <----------DOF2--------->AGP1  <---------AHL20(2)--------->LBD16 --------SPL7  ============================HOX2a_HOX2a  <---------TOE1(1)          <----------DOF2 ----->GAMYB   ===========================HOX2a_HOX2a   <---------ANAC46 <----------DOF2          --- ------>MYB46(3) --------->At4g35610===============================HOX2a_HOX2a     <---------DAG2 <-- ---->MYB52(1) <------ZmHOX2a(1) <---------CCA1(2)--------->AHL20(2)------>ZmHOX2a(1)<-----------GT1   acggacgatgatctcgaggagcttaagggatgtgtagatctagggtttgggtttaattacgaggagattcctgaactttgtaatactttaccagctcttg  18015200                                              <---------YAB1                                         --------->YAB1                                         <----                                         <---------ICU4                                       ------>ZmHOX2a(1)                                        <---------YAB1                                 <---------GLK1(2)    <---------MYB52(1)                --------->YAB1 <<<<<<<<<TBF1               --------->ARR14(2)   <-----------HVH21                 <------ZmHOX2a(2)                     --------->ATHB12   ======= ------>At4g35610                   <---------ARR11(3)      --------->ANAC46     <---------ARR14(2) - -------At4g35610                   --------->ARR11(3)  <<<<<<<<<TBF1     <---------ATHB12    =======   agctctgttactcgatgagtcagaagtttattgatcaagatcatcatcaccattcttcttcttcgccagagaagaaatcatcggttcttgattctcctgt  18015300  Previous    Next  AGI:  At2g43340.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31560.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31560.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN60580.1); contains InterPro domain Protein of unknown function DUF1685 (InterPro:IPR012881) Range:  from: 18014774    to: 18015742    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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