Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <---------ALFIN1                                                                                      --------->WOX13(1)                                                     --------->ZAT14                 --------->MYB46(3)      --------------------->WRI1                     --------->SPL7                ------->TEIL    ------>ZmHOX2a(1)                                <---------ZAT14            --------->ANAC58 ---------ARR14(2)                                   ---------->DOF2            --------->ANAC46 -------->ARR14(2)                              --------->At4g35610             --------->ANAC58 --------CCA1(2)                                --------->ZAT2               --------->ETT(2) ----->YAB1         --------->DEAR3(1)          <---------ZAT2               <---------ETT(2) <------ ----DOF2 ------>ZmHOX2a(1)                     <---------At4g35610         --------->DDF1    -------   catatcctcttcctctgtttcgccatcgttgtgatgctcatccacaatcgagctgtacagcgactcaaactcgtctatgtcgacgcatccatcaccgtta  17998700                             <----------DOF2                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                          --------->ARR11(3)                          <---------ARR11(3)                          --------->AGP1                          <---------ARR14(2)                          --------->ARR14(2)                          <-----------ARR10                        <---------MYB46(3)                          <---------AGP1                    --------->ANAC58                         <---------At4g35610          --------->GLK1(2)     ------>ZmHOX2a(2)   <---------CCA1(2)           <---------ARR14(2)   <---------ARR11(3)   ----------->ARR10            <---------GLK1(2)   --------->ARR11(3)<-----------HVH21               <---------ARR11(3)              <---------YAB1 ---MYB52(1)  --------->ATHB12                       --------->ARR14(2)  <---------At4g35610   <----- -->DOF5.7(2)<------ZmHOX2a(2)       <---------MYB52(1)     --------->ANAC58     <----------DOF2   gcatcgatcttgtggatcatttgagtcagatctttgtctggtatgtagattccaagattctcaagcgagtcgttgagctcttcctttgtgattcgaccgt  17998800                                                               <------NtERF2                                                               <----------CDC5                                                            --------->ATERF1(1)                                                           <---------ORA47(2)                                                           <---------ATERF1(1)                                                           <---------DEAR3(2)                                                           ------>NtERF2                                                           <---------RRTF1(1)                                                           <---------ERF1                                             ------>ZmHOX2a(2)------>NtERF2                                            <------ZmHOX2a(2) --------->At4g35610                                           ------->TEIL    <---------RAP2.3(1)                                           <-----------ARR10<------NtERF2                                           --------->ARR14(2) <---------At4g35610                                           <---------AGP1 <---------At1g77200                    <---                 <---------HSFB2a(2)       <---------ARR14(2)<---------DEAR3(1)                 <----                 --------->HSFB2a(2)   --------->SPL7     <---------DREB2C(2)                  <-----        --------->HSFB2a(2)          <---------SPL7       <---------RAP2.3(3)                 -------    <---------ANAC58                 ----------->HVH21    <---------RAP2.3(2)                 -------    <---------ANAC58             --------->ZAT2           <---------DEAR3(1)                  -------  <---------MYB52(1)             <---------ZAT2    <----------DOF2                 ----------->GT1 ------HVH21  --------->ARR11(3) <---------At4g35610    <-----------HVH21<---------YAB1      --------   caccgttcttgtcgaacatctggaaaacgcgtttgagctcggacggatctattcttttcgtcggcgctgaagaagatgatggagaaggtaacatcgttga  17998900       <---------MYB46(3)      <---------DEAR3(1)      <---------AtMYB61      --------->ALFIN1   <---------DEAR3(1) ------ANAC46 -----LBD16 ----DOF5.7(2)                                                              ---------->DOF2 ---->HVH21                                       ---------->DOF2  <----------DOF2                  < -->WRKY38(1)  <---------ANAC58          ---------->DOF2      <---------HSFC1(2)                    - -->WRKY12     <---------ANAC58        --------->ANAC58       --------->HSFC1(2)             ------->TEIL ->DOF5.7(2) --------->ARR11(3)        --------->ANAC58      <---------TOE1(2)          --------->MYB52(1)   cggagacggtggtgagttcttgtggagagttttgtcgaaccaagaaagagggaaaagagttcgtagcttctttggtactaaagagagaagaaacgaattt  17999000                                                                                  ------>ZmHOX2a(2)                                                                                 --------->CCA1(2)                             --------->MYB52(1)                                  <------ZmHOX2a(2)                  --------->ARR14(2)                                            <---------ARR11(3)                 <---------HSFB2a(1)                                            <---------ARR14(2)                 <----------TaMYB80                                             --------->ARR14(2)                 <---------KAN4(1)                                              --------->GLK1(2)                 --------->HSFB2a(1)                                            <---------AGP1                 --------->KAN4(1)                                              --------->ARR11(3)                ---------->TaMYB80                                  --------->MYB52(1)                <---------KAN4(2)                            ----------->GT1    --------->ARR14(3) ---------AHL20(1)<---------ARR14(2)                 <---------AHL20(2)         <---------ARR14(3) -------->ARR11(3)--------->KAN4(2)     --------->YAB1  <---------YAB1        ----------->ARR10------   agtatattgtagagaaggaatattctcaccataactgttgaatcacaactcttattttatgagaagaaaaaaacagagagaagatctgagaaacagagag  17999100                                                                                  <---------AHL20(2)                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                <---------YAB1                                                                              <---------ICU4                                                                              -------->ATHB1                                                                              <---------AHL20(2)                                                                              -------->HAHB4                                                                              <--------HAHB4                                                                              --------->ATHB51                                                                              --------->YAB1                                                                             --------->ICU4                                                                             <---------YAB1                                                                             <---------ATHB51                                                                           --------->YAB1                                                                           <---------ICU4                                                                          --------->ICU4                                                                          <---------YAB1                                                                         <---------AHL20(1)                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                             --------------->AGL15  <---------AHL20(1)                                             <----------DOF2        --------->AHL20(1)             --                                           <XXXXXXXXXXXXXXXXXXXXMIR859  --------->YAB1            <--                                           ---------->ID1           <---------AHL20(2)            ---                                       <---------ANAC58             --------->AHL20(2)           <---          <----------DOF2              <---------ANAC58           --------->GLK1(2)      <---------AHL20(1) --->ARR11(3)           *TSS       <------------CBF   <------ZmHOX2a(1)<---------YAB1 ----------->GT1   cttgaaacagagctttgttgatacagagaaacttggagattgtttgtctttatagaggagagagagagaatttattataattattaaatagtatattttt  17999200                                                                                        ----------->GT1           <-----------GT1                                                              --------->ANAC58         <---------AHL20(2)                                 --------------->AGL15       <---------HSFB2a(1)       <---------YAB1--------->ANAC58                       <---------------AGL15  <---------------AtSPL8     --------->AHL20(2)                                     ==================================MADS_MADS     <---------AHL20(2)                                     <----------DOF2    <---------AHL20(2)    <---------AHL20(2)                                  <---------MYB52(1)     --------->AHL20(2)    --------->ICU4   --------->ANAC58                  <----------DOF2        --------->AHL20(2) ------->LBD16<----------DOF2                --------->ICU4 <---------DAG2  <-----------------AGL3 -------HSFB2a(2)    --------->ANAC46  ------->TEIL    ------>ZmHOX2a(1) --------->AHL20(2)   ------- ------>HSFB2a(2)  <-----------GT1 <---------MYB52(1) --------->TOE2(3)----------->GT1  --------->ANAC58 ------LBD16---------->ID1      --------->MYB46(3)<-----------GT1    ---------->DOF2    --------->HSFB2a(1)   ccggaaattattttttctttttcacgcctatacaaccgttgaatctaatttttaatcctttactttttggagaaagtaaattaaaatggaacgttacaaa  17999300                                        --------->ARR11(3)                    <---------AHL20(2)                                        <---------ARR11(3)                    --------->AHL20(2)                                   <---------HSFB2a(2)                  --------->YAB1        -------                        <---------ICU4  <---------AHL20(1)           --------->YAB1         <--------             <---------AHL20(2)    --------->HSFB2a(2)               <---------ICU4     --------->ARR11(3)      --------->MYB52(1)--------->YAB1  --------->AHL20(1)          --------->ICU4      <---------ARR11(3) --->DOF2   --------->AHL20(2)<----------DOF2                     --------->YAB1  <---------ICU4-----   gaagaaaacaacgattttatagagaaacatgacttttctaaaaatatttgtagtcttcttctattcaacaataatcacatttaaaaattagattttacac  17999400                                                                           ------->TEIL                                                                           <-------TEIL                                                                       <---------------AtSPL3                     <---------AHL20(2)                                --------------->AtSPL8        --------->AHL20(1)                                             --------------->AtSPL3        <---------ARR11(3)                  <---------AHL20(2)         <---------------AtSPL8  <-----     --------->AHL20(2)            <---------ZAT14            <---------ARR11(3)              <------ -->ZAT6--------->ARR11(3)         --------->ZAT14            --------->ARR11(3)            --------- ---GT1--------->AHL20(2)      --------->ZAT6 --------->ANAC55(2)   <---------YAB1         --------->YAB1 ---->ANAC46         <-----------GT1        <-----------GT1  <---------CCA1(2)            <---------KAN4(1)   tgagcaaaaatatatacacatatttacatttgaacactatacttatttacatattatgttcttaaatcttataaatgtacatctctaaatgaataatctt  17999500                             <---------MYB59                        ------>ZmHOX2a(2)                       --------->GLK1(1)                       <------ZmHOX2a(2)                       <---------GLK1(1)                      --------->ARR14(2)                      <---------ARR14(2)                      <---------AGP1                      <---------ARR11(3)                      <-----------ARR10                              --------->GLK1(2)                      --------->ARR11(3)                             --------->ARR14(2)              <------ZmHOX2a(2)                                <-----------GT1              --------->CCA1(2)                           <---------MYB52(1)              ==============HOX2a_HOX2a                  --------->At5g28300             --------->AGP1 --------->ANAC55(2)          --------->LBD16             <---------ARR14(2)                         <---------ANAC58                    --------- ----------->HVH21   <------ZmHOX2a(1)                  ----------->GT1                    <---------YAB1 -----DOF2   --------->ARR11(3)                         <---------ANAC58    <---------AHL20(2)<------ ---ICU4     <---------ARR11(3)------>MYB46(1)      --------->DAG2   <---------ARR14(2)  --------->YAB1 >GLK1(2)    --------->ARR14(2)------>MYB83        ---------->DOF2  <---------GLK1(2)  ------->TEIL   tatatgacgaattaagatccaaaggatctcacctaatacaagttaaacgtagaaaaagccgtgatttacagaatccatttaagtgtatgaaccatgataa  17999600  Previous    Next  AGI:  At2g43290.1    Description:  MSS3 (MULTICOPY SUPPRESSORS OF SNF4 DEFICIENCY IN YEAST 3); calcium ion binding. similar to calcium-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G59440.1); similar to calcium-binding protein [Lotus japonicus] (GB:CAB63264.3); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Parvalbumin; (InterPro:IPR008080) Range:  from: 17998129    to: 17999124    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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