Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->ARR14(2)                        <-----------ARR10                        --------->ARR11(3)                    <---------At4g35610                  <-----------GT1                 ----------->HVH21       <---------AHL20(2)                           --------->YAB1       --------->AHL20(1)                          <---------YAB1       <---------AHL20(1)                        <---------CCA1(2)       --------->AHL20(2) ------>ZmHOX2a(2) --------->PCF5         --------------->AtSPL8      --------->AHL20(2)<---------ARR11(3)<------MYB46(1)          <---------------AtSPL8           < ----->ZAT14<---------AHL20(1)            <------MYB83 <---------ICU4                              <- ----->ZAT18--------->AHL20(2)        <---------MYB46(3)   <---------ARR14(2)                      -- ------ZAT14<---------AHL20(2)<---------SPL7--------->PCF2 --------->ARR14(2)          --------->YAB1   atactaaattttattttatttgacctgatcttcgtatggatggatggtcccatatcataagtatatggaaatgtactaacttatcgcattcaaaatacaa  17889300                                     --------->ALFIN1                                 ---------->DOF2                              ------>ZmHOX2a(2)                            <---------ARR11(3)               <---------YAB1<------ZmHOX2a(2)         ---------->ID1     --------->ARR14(2)                      ----------->GT1        <-----------GT1     --------->ARR14(3)             --------->AHL20(2)       <-----------GT1      <---------AGP1           <---------ANAC58 ---------AHL20(2)          <---------ARR14(2)       <---------ANAC58                        -------- --------AHL20(2)           <---------ARR14(3)     --------->ARR11(3)           --------->AHL20(2) ------->AHL20(2)           --------->ARR11(3)     <---------AHL20(2)           --------->YAB1    ---   attttttttttatcgttttgattcgaacaagatctcaaagtggacgtccctaatttcttgataaaatcagtagaaaaaacaataaaaacaactatatgta  17889400                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                 <--------HAHB4         --------->ARR14(2)                                                 <--------ATHB1         <---------ARR14(2)                                                 --------->ATHB51       <---------ARR11(3)                                                 --------->YAB1         --------->ARR11(3)                                                 <---------ICU4        <---------HSFC1(2)          --------->AHL20(2)                    <---------ATHB51       <---------HSFB2a(1)         <---------YAB1                         <---------ATHB12       --------->HSFB2a(1)       --------->YAB1                           --------->ICU4  <---------ANAC58              <------      <---------YAB1<---------At4g35610     ------>ZmHOX2a(2)   <---------ANAC58   ------>ZmHOX2a(2) ->ANAC55(2)    --------->ANAC46       <---------KAN4(2)        <---------ANAC46  --------------->AtSPL3 ------>ICU4  <-----------GT1<---------AHL20(2) --------->AHL20(2)     --------->HSFC1(2)     -------   atgagttgatcataatatacgatgctgatatttatagaggggatgatccaataattaagaagacttacttggaagatcccaaggatcgtacttatagata  17889500                                                                                                    <                                                                                                  ---                                                                    --------->ARR11(3)        -------                                                                    <---------ARR11(3)    --------->TOE1(3)                                                                ---------->DOF2           --------->TOE2(3)                                                              ------>ZmHOX2a(1)          ----------->RAV1(2)                                                     <---------ARR11(3)           --------->At4g35610                                                     --------->ARR11(3)           <-------GAMYB  <---  ------>ZmHOX2a(2)                      <---------DAG2   <---------ARR14(2)     <---------MYB46(3) = ---ARR11(3)                             <----------DOF2  --------->ARR14(2)   <---------MYB52(1)<--- -->ARR11(3)               ----------------------->TaNAC69(2)--------->TOE2(3)<-----------HVH21 -----   tcgatctgtttgataagttcgagtttgatggttttgttctctacttttcttcgaagatagtatcctaaaagctcttcatccgtcggatgaaacctgaacc  17889600                                    <---------MYB59                                    --------->TOE2(2)                                ------>ZmHOX2a(1)    --------->ALFIN1          ------>ZmHOX2a(2) ------ZmHOX2a(1)             <---------ICU4 ------>LBD16                <---------YAB1                                              <---------ATHB12 >TEIL                      <---------ARR11(3)        <---------ATHB12                  ------>MYB83< ------LBD16                --------->ARR11(3)     <---------ALFIN1                     ------>MYB46(1) ====================================HOX2a_HOX2a--------->ANAC46  --------->REM1(1)    --------->WOX13(1) --------RAV1(2)          <---------YAB1  <-----------GT1 <---------ICU4    <----------DOF2 --------- ---->TOE1(2)       <<<<<<<<<TBF1   --------->TOE2(3)<---------ALFIN1    ------>ZmHOX2a(2)  ---------   caggaagtggtgcttcgttttcttcttcatgatccttacctaagttaccttcgccactcatcttcactacatcgatctctttagaacaccaatcaagtca  17889700                                                                                       --------->WOX13(1)                                                                                     <<<<<<<<<<WRKY26                                                                                     <<<<<<<<<<WRKY38                                                                                     ------------>CBF                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                          <---------WOX13(1)                                               --------->ATHB12          <------------CBF                                         <<<<<<<<<GATA-1                --------->ATHB12                                   --------->AHL20(2)            <---------ANAC58    <<<<<<<<<<WRKY43             *TSS                  <---------AHL20(2)     <---------AHL20(2)    <---------ANAC46           <---------ARR11(3)     --------->ICU4     <---------YAB1    <---------AHL20(2)       ---------->DOF2  <-----------TBP <-----------GT1 <---------YAB1 --------->AHL20(2)   <-------- ----------DOF2         --------->AHL20(2)     <---------AHL20(2)<---------ANAC58  <------MYB46(1) >ANAC58   --------->ARR11(3)----------->GT1  --------->AHL20(2) <---------ANAC46  <------MYB83 >ANAC58--------->DAG2<---------------AGL15  <-----------TBP   <-----------GT1 <---------MYB46(3)   <   ttctttataaaaagttctctatacatatatatagtaaatatttatctatttattgattattttttttgcctgtttaattggtgcttggtcaattacgaat  17889800                          ------>ZmHOX2a(2)                        <---------AGP1                        <---------ARR14(3)                        --------->AGP1                              <---------YAB1                        <---------ARR14(2)                       <---------YAB1                        --------->ARR14(2)                  --------->LBD16                <---------YAB1                  --------->ANAC46                         <---------ANAC46         <---------AHL20(2)           <---------YAB1<------ZmHOX2a(2)                <---------LBD16        --------->AHL20(2)         <--------HAHB4 <---------ARR11(3)            <----------DOF2            --------->AHL20(1)         --------->YAB1 --------->ARR14(3)         --------->ARR11(3)            <---------AHL20(2)  --------->WRKY45--------->ANAC58              --------->AHL20(2) <---------AHL20(1)    <---------AHL20(2) -YAB1  <---------YAB1  --------->ARR11(3)      <---------AHL20(2) <---------AHL20(2)<---------AHL20(2) ----------DOF2   --------->ANAC58 <----------DOF2 <---------ARR11(3)    ---------->DOF2--------->AHL20(2)   gactttgactattattatgcacacaagatcttatagactttcccaagtattaaaatcttttacgggtattatttttaaagaaattttttatttaatattg  17889900                                                                          <---------YAB1                                                             <---------AHL20(2)                                                           --------->TOE2(3)                     <---                                                         --------->AHL20(2)                      ----                                                         <---------AHL20(1)                    ------                                                   <-----------GT1<---------AHL20(2)           <-----                                                   --------->YAB1<---------AHL20(2)           <------                                                --------->YAB1<---------AHL20(2)              <------                                              <---------YAB1 --------->AHL20(2)             ---------                                              <---------WOX13(1) --------->AHL20(2)         <--------        --------->YAB1                 <----------DOF2   --------->AHL20(1)                 ------>ZmHOX2a(1)     <---------HSFB2a(2)   <----------DOF2 <---------YAB1<---------ARR11(3)                <---------   gtttattctataagaatgaattcatccatctttcttatggtctttgtgattaataacaaaatattaattttatattttgaatgcgatagttttcctataa  17890000                                                       --------->AHL20(2)                                                       <---------AHL20(2)              --------->KAN4(2)                                                      <---------AHL20(2)              --------->HSFC1(2)                                                      --------->AHL20(2)              <---------KAN4(1)                                                      <---------AHL20(1)              <---------HSFB2a(1) ------YAB1                                        <---------AHL20(2)                 <---------HSFC1(2) ----->ICU4                                        --------->AHL20(1)                 --------->HSFB2a(1) --->YAB1                                          --------->AHL20(2)                 --------->KAN4(1) ---HAHB4                 --------->ARR14(2)      --------->AHL20(2)                 <---------KAN4(2) ---YAB1                  --------->GLK1(2)       <---------AHL20(2)             ------>ZmHOX2a(2) ---ATHB12                <---------ARR14(2)     <---------AHL20(1)           -------->HAHB4 ------>AGL15            <---------GLK1(2)      --------->YAB1             --------->YAB1 -------AGL15 <---------REM1(1)             --------->TOE2(3)            <---------AHL20(2) <-------- --------AGL3 ----------->GT1               --------->TOE1(3)--------->MYB59<---------TOE2(3) <------   ttagtgtgtttctgtgttgtaactagagaatctgaaacctccaaaacctaaaataatttaatttaggtctattgttttaatgatccgaatgttctgcttt  17890100                                                                                     --------->AHL20(2)                                                                                     --------->AHL20(1)                                                                                     <---------AHL20(1)      <---------TOE2(3)                                                              <---------AHL20(2)  <----------DOF2                                                 --------->ANAC58  <---------AHL20(2) -At4g35610                                                       --------->ANAC58  --------->AHL20(2) ----DOF2   <---------ZAT6                                    <-----------GT1---------->DOF2   caaactttaagtttgtgttattttgtcttaagacttgttttggctgtgtttgaaagttttttttttacaagcacataaaaaaagaattaaatttgtttat  17890200  Previous    Next  AGI:  At2g43000.1    Description:  ANAC042 (Arabidopsis NAC domain containing protein 42); transcription factor. Identical to Putative NAC domain-containing protein 42 [Arabidopsis Thaliana] (GB:Q9SK55); similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G12910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69983.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 17887692    to: 17889713    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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