Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ----------->GT1      <------ZmHOX2a(1)     ----------->GT1   <------ZmHOX2a(1) -----------RAV1(2)                            <---------HSFB2a(2) >ZmHOX2a(2)                                   --------->HSFB2a(2) -->GLK1(1)                          --------->WOX13(1)           --------->ARR14(2) --ARR11(3)                         --------->MYB46(3)            <---------ARR14(2) --AGP1                --------->ANAC58     <----------DOF2      <---------CCA1(2)   <------ZmHOX2a(1) ->ARR11(3)            --------->ANAC58 --------->YAB1 <-------TEIL  --------->TOE2(3)          -----   ctacaggaggataaatctatggagtaagccttggtccatccatcatcttttagaacatccatggtccatatccatagtatccaaggaggatgcaaaaacg  17874200                                                   <---------ANAC55(1)                                                   <---------ANAC55(2)                                                   <---------ANAC58                                       --------->ETT(1)                                           <--                                       <---------DEAR3(1)  <------MYB83                          ----                                      <---------ORA47(1)   <------MYB46(1)                       <---                                      --------->RAP2.6(3) <---------AtMYB61                      ----                                    <---------MYB46(3)  <-------GAMYB                            <---                                    <------MYB83   --------->ANAC55(2)                  <---------ANAC58                                    <------MYB46(1)<---------ANAC58                     <---------ANAC58                                  <--------P       <---------ANAC46<---------At4g35610  <---------ANAC46 ---->ATHB12           <---------TOE2(3) <------NtERF2 --------->MYB52(2)        <---------GLK1(1)---   attaggctatggctagacggtcatcaaggttgacaagttggtcggcataagttgcgtgagttggtcttgagcgaacattatggaactcttgtgtgtgaag  17874300                                                                                            ---------                                                                                         <------ZmHOX2a(1)                                                                                      --------->YAB1                                                                                     <---------ATHB12                                                                                 <---------MYB55(2)                                                                                 --------->MYB46(3)                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                              <---------ALFIN1   ----                                                                             ========================                                                                             ------>ZmHOX2a(2)   <---                                                                             ===================HOX2a_HOX2a                                                                             --------->MYB46(3) -----            <---------LBD16                                                 ====================HOX2a_HOX2a ---------->DOF2                                                            <------ZmHOX2a(2)  <----- ----ZmHOX2a(2)                                                             ========================= ----->ARR14(2)                                                        --------->HSFB2a(2)  --------- ------ARR11(3)                                                        <---------HSFB2a(2)--------->ALFIN1 ----->ARR11(3)        ----------->HVH21                 --------->ANAC46  --------->PCF2============ ------ARR14(2)   --------->DAG2                         --------->ANAC58  <---------ARR14(2) <------ ------>CCA1(2) ---------->DOF2<-----------GT1           --------->ANAC58  --------->ARR14(2) <------   atccaaagctagtacctggaaaggtttgacatttaaccagtagatggagccctgaacacacgcagacttccttctgggatccacccaataaggagggggg  17874400          --------->LBD16          ------>NtERF2         --------->ANAC46      ------>ZmHOX2a(2)     <---------GLK1(1)    <---------ARR11(3)    --------->ARR14(2) ------>ZmHOX2a(1) --------->HSFB2a(2) >ATERF1(1) ----->ARR14(2) =======HOX2a_HOX2a ------ARR14(2) ---->ATERF1(1)                                           ------>ZmHOX2a(2) ----ATERF1(1)                                       <---------WOX13(1) =======HOX2a_HOX2a                               <---------ATHB12 >ALFIN1<---------LBD16             --------->ARR11(3)  <---------ARR11(3)                <------ZmHOX2a(1) ============HOX2a_HOX2a            <---------ARR11(3)  --------->ARR11(3)              <---------TOE2(3) ---DEAR3(1)           <---------ICU4            <---------TOE1(2)                 ------->TEIL ---RAP2.3(3)          --------->YAB1          --------->TOE1(2)             <---------MYB52(1)     -   ctcctcgatctccgccattcaccaatattgacatcaaaaatctcacaatccaaggattgatctccattgttttgagaccgttttgaatctgaggattgaa  17874500              <------ZmHOX2a(1)                  <------ZmHOX2a(2)              ===========================HOX2a_HOX2a          --------->TOE1(2)                     <---------ARR11(3)       --------->ANAC58                         --------->ARR11(3)       --------->ANAC58                       ----------->ARR10      --------->GLK1(1)           ------>ZmHOX2a(2)      --------->WOX13(1)        <---------ARR14(2)      <---------ARR14(2)      <---------ETT(1)   ------->GAMYB                --------->ARR14(2)      <---------GLK1(2)<----------DOF2   <---------  --------->ANAC46              <---------AGP1<-------TEIL          ---------->ID1        <------ZmHOX2a(2) -------->MYB52(1)        --------->ZAT6     <--------P --------->ARR14(2)      >>>>>>>>>>AtTINY2   ttcaacggcaatccaaggacgatttcttccactagatcgggacataggtagatcatcggattcgggttttgttctctttcttccgacattggatcagggt  17874600                                   <---------TOE2(3)                         <---------ZAT14                         --------->ZAT14                                                           <-                        <---------REM1(1)                     <---------ANAC46                   <---                        --------->ALFIN1                    <------MYB46(1)                --------->REM1(1)                     ------>ZmHOX2a(2)                      <------MYB83                  -----------          <---------ETT(1)        <-----------GT1  <---------DAG2                     --------->ANAC58     <<<<<<<<<TBF1 --------->ARR14(2)              <----------DOF2          <---------RAP2.6(3) ----- ---------->ID1    <---------ARR14(2)--------->TOE2(3) <---------AHL20(2)  --------->RAP2.6(2) ------ --RAV1(2)>>>>>>>>>>AtTINY2  ----------->GT1      <---------DAG2----------->GT1       --------->ANAC58   tttgttcttcttccgacattggatcggtgtagggtttaacattatccattcccctttttatttggtttgtaacttagccgctctggttaagctacaatta  17874700      <---------At4g35610 --------->YAB1                                                                                 <---- -----------CBF                           <------------CBF                                   -------- ------YAB1         <---------ANAC46   ------------>CBF                                    <---------ICU4 ->CBF--------->At4g35610      <----------DOF2                                             <--------HAHB4 ------->CBF<---------AHL20(2)<---------ANAC58                                            --------->ICU4 --->YAB1   <---------ATHB51  <---------ANAC58              <---------AHL20(2)   <----------DOF2-----   caattgtcatctaaataatgggccttgtatgggcttatctgatcaattggtttcaaaactatttcatttgttatctagtagagcttatgggcataattat  17874800                  <---------ARR11(3)                                   <-------TEIL   --------->ANAC55(1)                                                 ------->TEIL   --------->ANAC55(2)                                             <---------TOE2(3)   --------->ANAC58                                              <---------AHL20(2)   --------->ANAC58            --------->TOE2(3)           --------->ANAC46                      <---   --------->ANAC46         --------->ARR11(3)          --------->ARR14(2)           ---------->DOF2<   <---------ANAC55(2)----------->GT1                   <---------ARR14(2)           ================ -----ANAC55(2)   --------->ARR11(3)                    <---------ARR11(3)      ===================== ->ICU4          <------MYB83 ----------->GT1<----------DOF2--------->LBD16     ---------->DOF2<----- ---->ANAC55(2)  <------MYB46(1)<---------MYB52(1) ------------>CBF<---------------AtSPL8     <------   gtaatacgcaacttgggctaggtcttgtaatatcgttatttctcatgcttttcttcaatatccgaaattaatgtacattatgcaaagtaaagagaattac  17874900                         <---------ANAC46                      ----------->HVH21                     <-------PIF5                     ------->PIF5                     <-----------HVH21                     ------->MYC3                     <-------MYC2                     <-------MYC3                    --------->ANAC55(2)                    --------->bZIP60(2)                    <---------O2                    ============================bZIP_DOF                    --------->ANAC58                    --------->ANAC46                    --------->O2                    <---------TGA1a                    --------->TGA1a                                      --------->DAG2      <----------DOF2------->MYC2                                       ---------->DOF2      ========================bZIP_DOF                            ----------->GT1 --------RAV1(1)    --------->ANAC58                              <---------ANAC46              ----- ---------REM1(1)   <---------ANAC55(2)                        --------->ICU4                   <---- =============================bZIP_DOF                        <---------TOE2(3)                 ----- =============================bZIP_DOF    --------->GLK1(2)  --------->YAB1                     ----- ----At5g28300    <------------OsbHLH66  <---------GLK1(2) <---------AHL20(2)            ----------->RAV1(1) -----GT1  <-----------GT1           ---------->DOF2       --------->AHL20(2)      --------->YAB1   tgttgtagcttttaaactggccacgtgatgggaacatgttaaagaatctaattcaacttattttaatgatgtgaaaaagtgagaatcacaacaacaatac  17875000                                                                                <---------YAB1                                                                              --------->YAB1        --------->ANAC58         ---------->DOF2                             <---------YAB1        --------->ANAC58      --------->ANAC58                       --------->ATHB12        --------->ANAC46--------->GLK1(1)                            <---------ICU4     --------->ANAC46   --------->CCA1(2)                            -------->ATHB1  <---------ARR14(2)   --------->ARR11(1)                            --------->ATHB51             <--  --------->ARR14(2)   --------->ARR11(3)                           <---------AHL20(2)     --------->ANAC55(2) ---->ANAC46           <---------ARR14(2)                           --------->AHL20(2)     <---------ANAC58 ------ID1 ----------->RAV1(1)--------->ANAC58                      <---------ATHB51       <---------ANAC55(2) ---->ANAC58           --------->ARR14(2)                        --------->AHL20(2)        <---------ANAC46 ---->ANAC58     ----------->HVH21                    ------->TEIL  --------->ICU4         <---------ANAC58   gacaaatacgacgcaacatttgacagatatgcaagaaaagcttagtggtttttatggacgttggacttaaattattgttttgataattcagtttcgtatt  17875100  Previous    Next  AGI:  At2g42955.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G30615.1); similar to F-box domain containing protein [Brassica oleracea] (GB:ABD65166.1) Range:  from: 17873763    to: 17874649    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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