Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->ZAT18                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                         <---------GLK1(2)                                                                      --------->ANAC55(2)                                                                      --------->ANAC58                                                                      <---------ANAC55(2)                                                                     <---------LBD16                                                                   <------ZmHOX2a(2)                                                                  <-----------HVH21                                                               <---------HSFB2a(2)                                                               --------->HSFB2a(2)                                                              <---------LBD16    --------->ETT(2)       --------->ZAT14                   xxxxxxxxxxxxxxx>smallRNA(le3)--------->ANAC58 ---------DOF2                       =====================================HOX2a_HOX2a     <-------GAMYB ------->TOE2(3)                     <------ZmHOX2a(1) <---------ANAC58  <---------ARR14(2) -->TEIL         <---------YAB1     <---------YAB1     <---------ANAC58  --------->ARR14(2)   tctttaaactgaagtcaatgttattgtttcttcgaattaggattagaagaagcgtttgcttacttctggatcacggattcttgtccacagacggttaagg  17865400                                                  <---------At4g35610                                          ------>ZmHOX2a(2)                                          <-------TEIL        <---------ARR14(2)                <----                                         <------ZmHOX2a(2)    --------->ARR14(2)                <----                                        --------->ARR14(2)--------->ZAT14                   <--------                                        <---------ARR14(2)<---------At4g35610   ---------->DOF2 <----                <----------DOF2      <---------TOE1(2)    <---------ZAT14   <---------ZAT6 --------->MYB52(2)   ccatcggaaacaaggctcctttcgaagtcttgagcctcgctggatccattgctgatgctctgcagatttgaagcagtagagataaagcctggttctttgc  17865500                                                                 <---------ICU4                                                              --------->YAB1 <---------At4g35610           <---------AtMYB61                     <---------YAB1  --------->YAB1 -------------AGL1                      <----------DOF2      --------->ICU4  --------->At4g35610 -----ANAC58             --------------->AGL15  <---------ARR11(3)       <---------DAG2          <--- --DOF2 <----------DOF2  <---------------AGL15  --------->ARR11(3) <---------CCA1(2) <-----------GT1 -----ANAC58   <---------MYB46(3) <-----------------------TaNAC69(2)     <----------DOF2       <-----   tcgttttggacttttggtggttttatactcttaagagatgtgctttggatgatcatttatgaaataatcatatcacttttgctgaaataactagacagat  17865600                                                                                                <----                                                                                           <-------GAMYB                                                                                           ==========                                                                                          <---------MYB46(3)                                                                                         --------->ALFIN1                                                                                         <---------AtMYB61                                                                                       --------->ALFIN1                                                                                      ------->MYC2                                                                                      ------->MYC3                                                                                      <-------MYC4                                                                                      <-------MYC3                                                                                      <-------MYC2                                                                                     --------->TGA1a                                                                                     <---------O2                                                                                     <---------TGA1a                                                                                     ==============MYC_MYB                                    <----------DOF2                                  --------->O2                                ------>ZmHOX2a(2)                                    <---------ANAC55(2)                              --------->ARR11(3)                  =============================bZIP_DOF                              <---------ARR11(3)        <---------MYB52(1)           --------->ANAC55(2)                           <---------WOX13(1)          --------->TOE2(3)        --------->ZAT14 <---- ------MYB46(3)          --------->ATHB12             ----------->GT1  ----------->GT1------->MYC4 ----GLK1(2)            <---------YAB1      <---------ATHB12      ---------->DOF2  <------------OsbHLH66   tgttgaaaccttgtactctgttcttgttgattgatcttcttttgcaatgaattgaatcgttaagttcagaaagaagaaaaactacacacgtgtggttgtc  17865700                            ------->MYC4                            <-------MYC4                            <-------MYC2                            ------->MYC2                            <-------MYC3                            ------->MYC3                           <---------ANAC55(2)                           <---------TGA1a              --------->TOE2(3)                   =========                           ====================================MYC_MYB                      ------>ZmHOX2a(2)                           --------->ANAC55(2)          --------->TOE1(3)                  ==========                           ==================================================bZIP_DOF      <------ZmHOX2a(2)                           --------->O2               ------>MYB83                        <---------ARR14(2)       <---------YAB1      --------->TGA1a            -------->P                          --------->ARR14(2)       ------------>CBF    <---------O2               ------>MYB46(1)                     <---------ARR11(3)    --------->ICU4       <---------ALFIN1        <-----------GT1           *TSS           --------->ARR11(3) -----ANAC58         <-----------HVH21     ----------->TBP            <----------ID1      <---------- ====================================MYC_MYB--------->AHL20(2)    ---------->DOF2     ------>NtERF2-- -----ANAC58      <---------ICU4         ------>ZmHOX2a(1)     --------->TOE2(3)     --------->DEAR3(1)   ttgttcattatcaatggcgataatgtcacacgtgtgtaatctcctataaattatccaacctttaaacttaaatcgacaaaaatgtctccgacgatcttat  17865800                            <-----------HVH21                            ------>NtERF2                            <---------RAP2.6(3)                            <-----------TGA1                           <---------bZIP60(1)                           --------->bZIP60(1)                      <---------ATERF1(1)                     <---------DEAR3(1)                   --------->LBD16                   ------>NtERF2                  <---------ANAC46                  --------->DEAR3(1)                  <---------ATERF1(2)                  --------->ATERF1(2)                  <---------RAP2.6(2)                 <------NtERF2                 --------->ATERF1(1)                ------>NtERF2<------NtERF2                <---------ATERF1(1)               <---------DEAR3(1)               --------->ALFIN1              --------->ATERF1(1)            <---------bZIP60(2)                       <---------ANAC55(2)            <---------DEAR3(1)                      <---------ALFIN1         ----------->TGA1------>NtERF2            ----------->RAV1(1)         ----------->HVH21 --------->RAP2.6(2) --------->LBD16      <---------MYB52(1)xxxxxxxxxxxxxxxxx>smallRNA(se3)                                <---------TOE1(1)     --------->LBD16<------NtERF2              ------>NtERF2                      <---------------AtSPL8   <---------LBD16<---------DEAR3(1)          --------->ANAC46             --------->ANAC58 =====HOX2a_HOX2a<---------LBD16              <---------ETT(1)             --------->ANAC46     ----- =====HOX2a_HOX2a--------->DEAR3(2)    ----------------->AGL1              --------->ANAC58     <---- -ARR10--------->ALFIN1--------->ATERF1(1)   <---------LBD16         <---------WOX13(1)<---------TOE2(1) ---->ZmHOX2a(1)--------->ABI4(2)      <-----------------AGL1    <---------WOX13(1) <---------SPL7   ccttctccggtgtgacggtgccggcgatgccgtcatcaggttccctctccggcaacacttatctccgattgatagacacacaatgtagtacgatgagaga  17865900             ------>NtERF2            --------->ANAC58                                 <---------ANAC58            --------->ANAC58                                 <---------ANAC46              <---------MYB52(1)            --------->ANAC46                                 <---------ANAC55(1)          <----------            --------->bZIP60(2)                              <---------ANAC58            --------->ANAC46       --------->ARR14(2)                                    <---------O2    --------->At4g35610       <-----------ARR10                            <---------At5g28300      <---------At4g35610       <---------ARR14(2)                        <-----------HVH21          <-----------RAV1(1)      --------->GLK1(1)                     <---------ARR14(2)      ------>ZmHOX2a(1) --------->ARR14(2)  --------->ANAC58                          --------->ARR14(2)  --------->ARR14(2) <---------ANAC58  --------->ANAC58                       ----------------->AGL1 <---------ARR14(2) <---------ANAC58 ---->ARR11(3)                     <---------AHL20(2)  --------->LBD16  <---------DAG2<---------ARR14(2) -----ARR11(3)                 ----------->GT1  <---------ZAT6  <-----------HVH21--------->ALFIN1   acttaagcaaatccacgccagtctcatcaaaaccggtttaatttccgatactgttaccgcgagccgtgtcctcgccttctgctgtgcgtctccgtcagac  17866000                                                                                           --------->HSFB2a(2)                                                                                           <---------HSFB2a(2)                                                                              --------->ANAC46                                                                     <---------MYB46(3)   <----------                                     --------->ANAC58              --------->LBD16<---------At4g35610                                     --------->ANAC58             <---------ANAC58--------->GLK1(1)                                 --------->YAB1                   <---------ANAC46<---------ZAT2              <------MYB46(1)   <---------ATHB12        --------->ZAT6        --------->ANAC58              <------MYB83    --------->WOX13(1)   --------->HSFB2a(2)        --------->ANAC58     <---------YAB1       <------ZmHOX2a(1)        <---------HSFB2a(2)       <---------LBD16--------- -HVH21      --------->MYB59<------ZmHOX2a(2)     <---------LBD16 <---------ANAC58--------->ZAT2   atgaattacgcttatttggtattcactaggatcaatcacaagaacccatttgtctggaacactataatccgtggtttctcacggagctcgtttccagaga  17866100                                                  <------NtERF2                                                 --------->At4g35610                                                 --------->LBD16                                                --------->DEAR3(1)                                                --------->RAP2.6(2)                        <---------ANAC46        ----------->RAV1(1)               <---------WOX13(1)              --------->RAP2.3(1) <----------DOF2----------->HVH21          ---------->DOF2 -------AGL1 --------->ATHB12             ----------->HVH21        ------>ZmHOX2a(1) <---------YAB1 - >LBD16     <---------YAB1            <---------MYB52(1)<---------WOX13(1)   ---------->DOF2        -   tggctatttcgattttcattgacatgttgtgttcttctccgtctgtgaagccgcagagattgacttatccttcggtgttcaaagcttatggtagacttgg  17866200                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                            ---------                                     ---------->DOF2                              <---------ANAC58                                <---------YAB1                                    <---------ANAC58                               <-------GAMYB                           --------->ARR14(2) --------->ANAC55(2)                              <------MYB46(1)                      --------->ANAC58       <---------ANAC58              --------->ANAC58<---------MYB46(3)                   --------->ANAC46       --------->ANAC46              --------->ANAC58<------MYB83                         <---------ANAC55(2)    <---------ANAC58      ----------->HVH21       ----------->GT1                      --------->ANAC55(1)    <---------ANAC55(2) --------->ZAT2        --------->TOE1(2)                           --------->ANAC55(2)   <-------TEIL <---------ZAT2<------NtERF2 <---------AtMYB61                     --------->ANAC58      ------->TEIL -------->ANAC58    --------->AHL20(2)                            <---------LBD16 <---------ANAC46  < -------->ANAC58 --------->WOX13(1)<---------YAB1          ----------->GT1   <-----------RAV1(1)   <-   ccaagctcgtgatgggaggcaattacatgggatggttattaaagagggacttgaagacgactcgtttatacggaatacgatgttgcatatgtacgtgact  17866300  Previous    Next  AGI:  At2g42910.1    Description:  ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4). Identical to Ribose-phosphate pyrophosphokinase 4 (PRS4) [Arabidopsis Thaliana] (GB:Q680A5;GB:Q9S7B9); similar to ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3) [Arabidopsis thaliana] (TAIR:AT1G10700.1); similar to Ribose-phosphate pyrophosphokinase 4 (Phosphoribosyl pyrophosphate synthetase 4) (GB:Q9XGA1); contains InterPro domain Phosphoribosyl pyrophosphokinase; (InterPro:IPR005946); contains InterPro domain Phosphoribosyltransferase; (InterPro:IPR000836) Range:  from: 17863345    to: 17865674    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g42920.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G48910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70016.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 17865775    to: 17867461    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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