Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------         <---------ARR11(3)                            =================================HOX2a_HOX2a --------DOF2                                          <------ZmHOX2a(1)                 <---------ANAC46 -------DAG2                                         --------->LBD16                    <---------LBD16 ------DAG2      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------LBD16                    --------->ALFIN1 -----GT1--------->ARR11(3)                        --------->TOE1(2)             ------>ZmHOX2a(2)   ctttttgcgattatcttgctgcatcgtgactcaattgaaacacagactaaaaacccaggaattagaagaaccctagaattcgatctgaattggggggagg  17851100                            <------NtERF2                                                     -------                          --------->PCF2                                    --------->At4g35610======                     --------------------->WRI1                             <---------At4g35610------                  --------->RAP2.6(2)                                   <---------ARR14(2)    -------                  --------->RAP2.3(2)     <---------------AGL15         --------->ARR14(2)    -------                <---------At4g35610       --------------->AGL15    <---------ZAT2         <------ZmHOX2a(2)                --------->At4g35610    <---------ALFIN1            ----------->RAV1(2)   <-----------HVH21             <------ZmHOX2a(2)      --------->ZAT6              ----------->HVH21     <---------ATHB12            <---------ARR14(2)      --------->AtMYB61        --------->ARR14(2)  --------->LBD16            --------->ARR14(2)     --------->MYB46(3)        <---------ARR14(2)  ------>NtERF2-------           --------->At4g35610  <---------ETT(2)             --------->GLK1(2)  <---------ETT(1)  --- ----->GT1 <---------At4g35610  --------->MYB46(3)          <---------GLK1(2)  <---------LBD16-------   gaaatagaaattcagatcagccgcattggccccatcgaccactactccaaatggcgaagctagaatccgacctggttctgctccggcaatcgatcaccga  17851200      <---------ARR14(2)      --------->ARR14(2)                                  --------->ANAC58      <---------GLK1(2)                                   --------->ANAC58 -->DREB2C(2)                                         --------->MYB46(3) ======================RAV                           --------->ANAC46 ----->RAV1(1)                                    <---------At5g28300 -->DEAR4(1)                                  <xxxxxxxxxxxxxxxxxxsmallRNA(si3) -->At1g77200                              --------->ANAC58                 ------->GAMYB -->DEAR3(1)                               --------->ANAC58                <---------MYB52(2) ------------------>WRI1    <-----------GT1--------->ANAC46------->GAMYB ----------->RAV1(1) ---->HVH21<-----------RAV1(2)           <-----------GT1--------->MYB52(1) --------->MYB46(3) <------   cagagacagaatcgcaggcgaatttctcattcacctctctaattcacccaattacccccaacgaaatcgaaacaacaacaaacaatcgcagttcaagata  17851300                                                                            ----------->RAV1(1)                                                                           --------->DEAR4(1)                                                                           --------->At1g77200                                                <-------MYC3       ------>ZmHOX2a(2)                                                ------->MYC3      <------ZmHOX2a(2)                                                <-------MYC2      --------->CCA1(2)                                                ------->MYC2      <---------At4g35610                                               --------->ANAC58  --------->AGP1 --------->ANAC58                                               --------->ANAC58  <---------AGP1 --------->ANAC58                                              ------->TEIL<------NtERF2    <---------ETT(1)                                              <---------TOE1(2)  --------->ARR11(3)       <-------TEIL                                              <---------TOE2(2)  --------->ARR14(2)      --------->CCA1(2)                                             <---------ALFIN1    <---------ARR14(2)     --------->ARR14(2)                                           --------->ANAC46      <---------ARR11(3)     <---------ARR14(2)                                           --------->ANAC58  --------->ANAC58   --------->ANAC46                                           --------->ANAC58  --------->ANAC58 <---------ALFIN1                                          --------------->AtSPL3<---------GLK1(1)  --------->MYB52(1)                <---------At4g35610  <----------DOF2     <---------DEAR3(2)--------->DREB2C(2)    <------ZmHOX2a(1)               <---------ANAC58     ------>NtERF2     --------->ANAC46 ---ARR11(3)    --------->At4g35610 <---------ANAC58    <---------DEAR3(1) --------->DEAR3(1)   aatcgaggaattgaagatagcagagtgcgaacagcattgctttagacgcacgttttcgtcggcacgagatctgatcaccgacacacaagggatacagaga  17851400                                                                    --------->GLK1(2)                                                            --------->ANAC58                <--------                                                            <---------TOE2(3)        <-----------TBP                                                            --------->ANAC58       <---------AHL20(2)                                ----------->GT1           --------->CCA1(2)        <-----------TBP                     --------->CCA1(2)    ---------->DOF2*TSS <------ZmHOX2a(1)    --------->AHL20(2)                    <----------ID1<---------ZAT6        --------->CCA1(2)        <-----------TBP ----   gagagagagagagagagagagagagacgaagaagtagtgaaaatgaaaggagagagagagataaggaaggaatctagacggagatttatatatagaggtt  17851500                <---------At4g35610                                       --------->AHL20(2)                --------->At4g35610                                       <---------AHL20(2)           <------MYB83                                                   --------->ATHB12           <------MYB46(1)                                                --------->ATHB51          --------->MYB46(2)                                             --------->AHL20(2)          --------->MYB59                                                <---------AHL20(2)      ----          <---------MYB46(3)                                             <---------AHL20(1)      <---      <---------ANAC58                                                --------->AHL20(1)         ----      <---------ANAC58                                                <---------AHL20(1)        <----      <---------ANAC46                                                <---------AHL20(2)        -----    <---------ANAC46                                         ----------->GT1                 --------  <-----------HVH21                            --------->ANAC58       --------->AHL20(2)     -------- --------->ALFIN1      <---------AtMYB61       --------->ANAC58      <---------AHL20(2)      <------- <-----------RAV1(1) <----------DOF2           -------->P    <----------ID1           <---------ZAT6 -TOE2(3)<---------MYB55(1)                  --------->MYB46(3)  --------->AHL20(2)   ----------->GT1 ------>DOF2    <---------ZAT2      ------>ZmHOX2a(2) ----------->GT1--------->AHL20(2)      <-------   aaagtgtcgcgtttggtaagctgctttggtcactgtgatccaaaaaaacaacccattagtaaaacgaaaaaataaattatttgatcaagtgttaataaat  17851600         --------->ATHB12         --------->ATHB51        --------->ICU4        <---------YAB1    ===================HOX2a_HOX2a    <------ZmHOX2a(1)  --------->MYB59                                                                                   - <---------ICU4           <---------YAB1            <---------ICU4                                  - ----->AHL20(1)         --------->ATHB51            --------->ATHB12                                < ------AHL20(2)         --------->ATHB12           <---------YAB1                                   - ----->AHL20(2)         <---------ICU4            <----------DOF2                                  -- -----AHL20(2)          <--------HAHB4           ------>ZmHOX2a(2)                                 -- ---->AHL20(2)         --------->ICU4          --------->ARR11(3)                               <---- ->AHL20(2)            <---------YAB1          <---------ARR11(3)                           <-------- ->AHL20(1)     ------>ZmHOX2a(2)     ------>ZmHOX2a(2)           --------->YAB1          <---------ANAC58 --AHL20(1)   <---------AGP1        --------->ARR11(3)       <---------ATHB12          <----------DOF2 --AHL20(2)   --------->ARR11(3)    <---------ARR11(3) <-----------GT1     <----------DOF2<---------ANAC58   taattaggacattattgatctggtcattattagtgtatgatctatttttgatctttattgccattcattcatgtcttctttatccaattctttcgttttg  17851700   ------->TEIL                                   ------>ZmHOX2a(1) -------->ANAC55(2)                              --------->TOE1(3) -------->ANAC58                                 --------->TOE2(3) ---------ANAC55(2)    --------->TOE2(3)       <---------YAB1     <---------------AGL15 -------->ANAC58       --------->YAB1      <----------DOF2        --------------->AGL15            <- ------------->AtSPL3 ----------->GT1     <---------ICU4         <-----------------AGL3            <- ------------->AtSPL8<---------TOE2(3)   <---------YAB1          ----------------->AGL3         <---- -------HVH21    --------->CCA1(2)     --------->YAB1     <----------DOF2            <----------DOF2 -MYB52(1)      <---------ARR11(3)    <---------YAB1 ---------->DOF2     --------->MYB52(2)<---------AHL20(2)   tcacgtacttatctcatagatataatgttaatagaatgttatcatctttatccttaaaagcttttttgctaattttagttgctaaaactttgttttattc  17851800                                          --------->WOX13(1)                                       <-----------GT1                                  --------->AHL20(1)                               <---------At4g35610    --------->ATHB12              <---------AHL20(2)                             <-----------GT1   <---------YAB1                 <---------AHL20(1)                         --------->ICU4 ---------DOF2                   <---------AHL20(2)                       <------ZmHOX2a(1) --------DAG2   ----------->GT1  --------->AHL20(2)                     --------->ANAC58 -------GT1<----------DOF2       --------->YAB1                         --------->ANAC58            <   actttatcatttgctatattgtatatactgctaaattatattttcaatctatatttcatcatcttcatttttgtaaggaatttttagcttattttttgta  17851900                          <---------AHL20(2)                          --------->AHL20(1)                         --------->YAB1                         --------->ATHB51                         <--------HAHB4                         -------->ATHB1            <---------AHL20(2)                <---------GLK1(2) --------->At5g28300<---------AHL20(2)              <---------YAB1     ----------->GT1<---------AHL20(1)       ----------->GT1   <---------ICU4         --------->AHL20(1)      <---------TOE2(3)         ---      --------->HSFB2a(2)<---------AHL20(2)   --------->AHL20(1)        <---------YAB1            ---      <---------HSFB2a(2)--------->AHL20(2)   <---------AHL20(1)       --------->AHL20(2)      ------     <---------ANAC46   <---------ATHB12     --------->AHL20(2)        --------->YAB1      --------->TOE1(3)   --------->GLK1(2)    <---------ATHB51   --------->AHL20(2)   <-----------GT1         <-----------GT1 ---------TOE2(3)       --------->ICU4   --------->AHL20(2)---------->ID1   ----------->GT1--------->TOE2(3)   ttaagtttctggtaatatgattctcaattattttgctgtaaaaaaaaatatatattattttgtttttttccattaatattgtatatcaaataaccttcaa  17852000  Previous    Next  AGI:  At2g42880.1    Description:  ATMPK20 (Arabidopsis thaliana MAP kinase 20); MAP kinase. Identical to Mitogen-activated protein kinase 20 (MPK20) [Arabidopsis Thaliana] (GB:Q9SJG9;GB:Q945L8); similar to ATMPK18 (ARABIDOPSIS THALIANA MAP KINASE 18), MAP kinase [Arabidopsis thaliana] (TAIR:AT1G53510.1); similar to ATMPK19 (Arabidopsis thaliana MAP kinase 19), MAP kinase [Arabidopsis thaliana] (TAIR:AT3G14720.1); similar to MPK16 (mitogen-activated protein kinase 16), MAP kinase [Arabidopsis thaliana] (TAIR:AT5G19010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70024.1); similar to HA-tagged mitogen activated protein kinase 20 [synthetic construct] (GB:ABG5 Range:  from: 17847465    to: 17851457    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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