Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <------MYB83                                       <------MYB46(1)                                     <--------P                                    <-------GAMYB                                   --------->MYB55(2)                                   <---------MYB46(3)                                  <---------TOE2(3)                                --------->DAG2                                  <---------YAB1                                  --------->DAG2                             --------->ATHB12                             <---------WOX13(1)                            <---------YAB1                              --------->ATHB12      -------                            --------->ICU4                     >>>>>>>>>TBF1     ---------->DOF2 <---------ZAT6      --------->ANAC46<---------ANAC46   --------->At4g35610 ----------->GT1   <------   gaagagttagggatgagttttatagggaacatgattgtggttgggaagtgagtgaagcagttgaagaagaagactgattggagaaaagggagagtgaaga  17816300                                                                  <---------TGA1a                                                                  <---------ANAC46                                                                  <---------ANAC58                                                                  <---------ANAC55(2)            ----                                                 <---------RAP2.6(3)                             ----                                                --------->RAP2.6(2) ----------->GT1       <---------ARR14(2)                     --------->ARR14(2)      <---------ARR14(2)   <---------ANAC55(1)     --------->ARR14(2)                     <---------ARR14(2)      --------->ARR14(2)   <---------O2  <---------ANAC46 ----                    <------ZmHOX2a(1)    --------->At4g35610      --------->O2--------->ZAT18 <------ -->ICU4      --------->At4g35610  --------->ALFIN1               --------->TGA1a <---------HSFB2a(2) ---YAB1---------->DOF2 <-----------GT1  <---------At4g35610      <---------ANAC58--------->HSFB2a(2)   ttgaagaagggaaagaagcagaggatttacaagaggggtttggagcagagccgaaatcgagtcgagagacgtgtgataagtggtctggaccggttttgca  17816400                                                 --------->bZIP60(1)                         <---------ZAT18         --------->ANAC58                         --------->ZAT18         --------->ANAC46                         --------->ZAT14         --------->ANAC58                         <-------TEIL            <---------bZIP60(1)                       <-------PIF5   <---------ANAC58    <---------ANAC58  <---------At4g35610     ----------->HVH21    ----------->RAV1(2)------->PIF5   <---------ANAC58    <---------ANAC58  <---------ZAT2  <---------ANAC46 ----->ANAC58         --------->At4g35610    <---------WOX13(1)                   --------->ARR11(3) ----->ANAC46         --------->ZAT2 <---------MYB46(3)                           <---------ARR11(3) ----->ANAC58       <-----------RAV1(2) --------->ALFIN1            --------->ARR11(3)          ----- ---ZAT18   --------->ICU4        --------->ALFIN1------>NtERF2 --------->At4g35610 ------>ZmHOX2a(2)   ctcaatgcctggccaagatgagccaggtgcacaagggtttgggtgggattgacgccattgttgatcagaagacattgattccatgatcttgaagagagtt  17816500                                                              <-----------RAV1(2)                                                        <---------ZAT6                                            --------->At4g35610                   <---------TOE2(3)        <---------At4g35610     ---------->DOF2        <------ZmHOX2a(1)      --------->At4g35610                   <------NtERF2     <---------LBD16  <---------ZAT14      -      <---------At4g35610            <---------ANAC58<---------AtMYB61         --------->ZAT14  -----    <-----------RAV1(2) <------NtERF2<---------ANAC58--------->ALFIN1 <XXXXXXXXXXXXXXXXXXXXMIR847  -- ---->GLK1(2)<------NtERF2  --------->GLK1(2)  <------ZmHOX2a(1) <------ZmHOX2a(1)     <------ZmHOX2a(1)   tctgactcagatggaggcattgaggcagagactctgttttcttggcagaggaagagtggtgttatcaggagaaagaagaagagcagtgaggaaggagatg  17816600                            <---------REM1(1)                          <---------ANAC46                    <---------ANAC46                         <---------AtMYB61           <---------ANAC58                   <---------TOE2(2)                 <---------ANAC58                   <---------TOE1(2)                 --------->ALFIN1                         <------ -------->DAG2 <---------YAB1                      --------->ALFIN1*TSS <---------YAB1        ------- ------>GT1   <-----------TGA1           ---------->DOF2      <---------ANAC58            ---------->DOF2 -------->DOF2<-----------HVH21         <------ZmHOX2a(1)     <---------ANAC58        --------->YAB1   gtaaagctctcttcatcgtcataggttttggtgtaagagagaggaaagagagagtgtgtgtgtttcttggtgatattatactgagaattcataaaagttc  17816700                                             --------->GLK1(2)                                            <---------GLK1(2)                                         --------->YAB1                                    --------->DOF5.7(2)              --------->DAG2           -------                                    <---------MYB52(1)              ---------->DOF2           -------                                   --------->TOE2(3)         ----------->GT1                 <------ZmHOX2a(1)                                  <---------bZIP60(1)       --------->DAG2                --------->HSFB2a(2)                                  ----------->GT1          ---------->DOF2                <---------HSFB2a(2)     ------------>CBF             <---------ANAC46       <------ZmHOX2a(1)           <---------YAB1 ---ARR11(3)                   ----------->TGA1       <------ZmHOX2a(1)       --------->AHL20(2) -->ARR11(3) ---------->DOF2   ----------->HVH21<----------DOF2  ----------->TBP   --------->YAB1   ttcattctccaatgcaaaagaaaatggagagatgtgacgttaattagaatctttgaggaggaaaagtataaaaagtgagattatatcatcatcgaggagc  17816800                                                                                   <-------MYC2                                                                                   ------->MYC3                                                                                   ------->MYC2                                                                                   <-------MYC3 -----                                                                                  <---------ANAC55(2)                                                                                  ===================                                                                                  --------->ANAC55(2)                                                                                  --------->O2  <----                    <------ZmHOX2a(1)                                             --------->ANAC58                  <---------TOE2(3)                                               --------->ANAC58      ---------->DOF2 ---------->DOF2                             --------->ANAC58<---------TGA1a   <---------------AGL15                                          --------->ANAC58<---------O2 <-----   --------------->AGL15      ---------->DOF2          <------ZmHOX2a(1)          --------->TGA1a  ----------------->AGL2--------->DAG2               <---------TOE1(3) --------->ANAC58     --------- ----------------->ANAC81----------->GT1             <---------TOE2(3) --------->ANAC58  --------->WOX13(1) ---->GT1       --------->TOE1(2)              --------->ICU4<----------ID1   ----------------->PIF3(1)   aaaaacccaaaagagaaacttaggaaaaggttaaaagagtttaagtgaaatgtttaaggattagggacaagacaagacagagacacgtgaacaatcagaa  17816900                                                                                    <---------YAB1                                                                                  --------->AHL20(2)                      <---------ZAT14                                     --------->At4g35610           --------->YAB1                                                 <---------At4g35610 ---->GLK1(2)         --------->ZAT14                                --------->ALFIN1 =========================bZIP_DOF                               <---------ANAC58 --------->YAB1 -------ARR10  ---------->DOF2              ---------->DOF2      <---------ANAC46<---------ATHB51   = ----GLK1(2) <---------YAB1              ----------->GT1         <---------ANAC58--------->ICU4     - >YAB1    <---------YAB1           ---------->DOF2             <---------YAB1<-------TEIL     -------   tctaaacaaggtatgataaaagagtgaagacttagaagaaagctagtaaagaatacgaataggttttgagtgtgtgagatgcaattataaatggaagtga  17817000                  --------->ALFIN1                  <--------P              <---------ANAC46             --------->ALFIN1          <-------MYC3          ------->MYC4          ------->MYC2          <-------MYC2          <-------MYC4          ------->MYC3         <---------O2         ==================MYC_MYB         --------->O2         ===============================bZIP_DOF         ==================MYC_MYB         <--------ABF1         --------->ANAC55(2)         --------->TGA1a         <---------ANAC46         <---------ANAC55(2)         <---------TGA1a <----------ID1        ------------>OsbHLH66         <------MYB46(1)    ----------->HVH21<---------ZAT6   <------MYB83                                     ---------->DOF2 ==================bZIP_DOF         --------->ALFIN1         <xxxxxxxxxxxxxxxxsmallRNA(i)         --- --------->DOF2 <---------ANAC46    <--------P--------->ANAC58                      --------->AHL20(2) ---->HVH21--------->ALFIN1  ---------->DOF2  --------->ANAC58    ---------->DOF2   <---------AHL20(2)   ctgaaagtgacacgtgtggggtagtgagagacaaagaggtagggactcaagtcatgagattgggaagagaaagagaagacacaaaattaaaaagagtact  17817100                                                                                                  ---                                                                          <---------ANAC58        ---                                                              ------>MYB83<---------ANAC58        <--                        ------->MYC3                        <---------MYB59               <------MYB46(1)                        <-------MYC3            <---------DAG2------>MYB46(1)   <----------DOF2   <--                     --------->ANAC46           <----------DOF2         <------ZmHOX2a(1) <------MYB83 ------>ATHB12   --------->AtLEC2 <----------DOF2          ----------------->AGL3 <-----------RAV1(1)   tgatgggttttgtaaggccatacacacatgtttcttctttattcaaaacacttttcttcgaaccaaattttgaaggacttgtctttgttgggaggtagtc  17817200  Previous    Next  AGI:  At2g42800.1    Description:  leucine-rich repeat family protein. similar to TMM (TOO MANY MOUTHS), protein binding [Arabidopsis thaliana] (TAIR:AT1G80080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62290.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 17815019    to: 17816667    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version