Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->YAB1                 --------->ARR11(3)          <<<<<<<<<ARR2       ----------------->AGL1                <---------ATHB12       --------->ANAC46     --------->ANAC55(2)    --------->ZAT14      <-------TEIL      --------->WOX13(1) ----GLK1(1)    <------ZmHOX2a(1)--------->ICU4                 --------->TOE2(3)      ----------->GT1   tctcactataccacactaggaacttgattcatgtaatatttcaaacaatcaaaacattcactaaaacctctaaaattcaaatctatgactcgaaaataac  17806700                                      --------->ATHB12                                  --------->YAB1                                     <---------YAB1                                    <---------ATHB12                                <---------At4g35610   <---------ARR14(2)      <---------At4g35610  --                              <-----------RAV1(2)     --------->ARR14(2)      --------->At4g35610----                      <-----------HVH21 <---------WOX13(1) <----------DOF2    <---------ZAT2---------      <-----------HVH21--------->WRKY18(1)          <---------MYB46(3)   ----------->HVH21 <---------   caaaacttggtcagagacaaacctcgtcaagctcagaagatgattgtttaagagcggttctctttttccatctccctgatagctgagcaatcgtgtcacc  17806800                                                               --------->At4g35610                                                               <---------At4g35610                                                            --------------------->WRI1                                                           --------->ARR14(2)                                                           <---------ARR14(2)                                                          <------NtERF2                                                         ------>NtERF2                                                        <---------ANAC58                                                        <---------ANAC58                                                        --------->DEAR3(1)                                                       --------->RAP2.3(1)                                                       <------NtERF2                                                       --------->ATERF1(1)                                                      <---------RAP2.3(1)                                                      ------>NtERF2                                                      <---------ATERF1(1)                                                      --------->LBD16                                                     --------->ATERF1(2)                    <------NtERF2                    <---------ATERF1(2)                    ----------->HVH21                --------->DEAR3(1)                   <---------RAP2.6(3)               --------->RAP2.3(2)                   <-----------HVH21                 <---------DEAR3(1)                  --------->ATERF1(2)               <---------LBD16                              <---                  --------->RAP2.6(2)               --------->ERF1                               <---                  <---------ATERF1(2)               --------->ATERF1(1)                          ----               --------->LBD16                      --------->DEAR4(2)                      <--------               ------>NtERF2                        --------->RAP2.3(1)                  --------->HSFB2a(2)              --------->DEAR3(1)                   --------->MYB52(1)                  <------ZmHOX2a(2)          --------->ZAT14                          <---------ATERF1(1)                --------->ARR14(2)       <---------ANAC58  --------->ZAT2           --------->DEAR3(1)                  <---------ARR14(2)       <---------ANAC58  <---------ZAT2           --------->ANAC46               --------->TOE1(2) ---------->DOF2 --------->SPL7   ---------->DOF2 ------->GAMYB--------->ZAT2 <---------ARR14(2) <--- --------->HVH21------>NtERF2 <---------ANAC58   --------->DEAR3(2)           --------->ARR14(2) <--- ----->LBD16 <---------LBD16  <---------ANAC58   --------->MYB46(3)           --------->GLK1(2)<----- -->HVH21 --------->ZAT18--------->At4g35610     <------------AtMYB77     --------->ANAC46--------->LBD16 --HVH21  <---------ZAT14<---------At4g35610   --------->ARR14(2)        <---------LBD16 <---------HSFB2a(2)   ggtgaaagtgagtgctccggccgtcacagcttgcttcaaaggaaaccgataaccgccggcgtctctgctcacatcgacggaatccgacgatccagaatta  17806900                                                                                        <---------MYB55(2)                                                                                       ------>MYB83                                                                                     --------->AtMYB61                                                                                     <---------ALFIN1                                                                                     ------->GAMYB                                                                                    <---------MYB55(2)                                                                                   --------->ANAC58                                                                                   -------->P                                                                                   --------->ANAC58                                                                                ------>NtERF2                                                                                --------->LBD16                                                                                <------NtERF2                                                                               --------->ANAC46                                                                               --------->ANAC58                                                                               --------->RRTF1(3)                                                                               --------->RAP2.3(2)                                                                               --------->ANAC58                                                                               --------->RAP2.6(2)                                                                               --------->DEAR3(1)                                                                               --------->RRTF1(2)                                                                               --------->RAP2.3(3)                                                                              <------NtERF2                                                                              --------->ATERF1(1)                                                                              --------->RRTF1(1)                                                                              --------->RAP2.3(1)                                                                              --------->ERF1                                                                             --------->ABI4(1)                                                                             ------>NtERF2                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                                                                            <---------ALFIN1                                                                            <---------ATERF1(2)                                                                            --------->RAP2.3(3)                                                                            --------->DEAR3(1)                                                                            --------->RRTF1(3)                                                                            --------->RRTF1(2)                                                                            --------->RAP2.3(2)                                                                           --------->RAP2.6(1)                                                                           --------->ATERF1(1)                                                                           <------NtERF2--------->MYB46(3)                                                                           --------->RRTF1(1)                                                                           --------->DEAR4(2)                                                                           --------->ORA47(2)                                                                           --------->RAP2.3(1)                                                                           --------->ERF1                                                                          <---------RAP2.3(1)  <---------ANAC58                                                       --------->DEAR3(1)   <------  <---------ANAC58                            --------->ANAC58        <---------ALFIN1 --------->ANAC46 ------ANAC58                                 --------->ANAC58        --------->AtMYB61--------->ANAC58 ------ANAC55(1)                           ------>ZmHOX2a(2)        --------->MYB52(1) --------->ANAC58 ----->ANAC55(2)                       --------->WRKY38(1)         --------->AtMYB61<---------MYB52(2) -ICU4 --------->TOE2(3)               --------->WRKY12      --------->LBD16--------->ATERF1(2) ------ANAC55(2) --------->LBD16      <---------MYB52(1)   <---------LBD16<---------ATERF1(1) <------ ------ANAC58  <---------LBD16       <-------GAMYB         --------->LBD16------>NtERF2------>MYB46(1) ------GT1 <-----------HVH21  <----------DOF2 --------->ANAC46    --------->MYB46(3)--------->MYB46(3)   cgtttcttacctctatcaccggaagacttcttctttctccgttgatcgaagccattccatccccagaaaccaccagcgccgccgcaaccacccaatgcgt  17807000                                                                                              <------MYB46(1)                                                                                              <------                                                                                              <------MYB83                                                                                             <-------                                                                                             --------                                                                                           <---------MYB52(1)                                                                                      <-----------GT1  --------->YAB1   <---------ANAC46              --------->TOE2(3)                   <-----------GT1 --------->AHL20(2)<---------ANAC58              --------->TOE1(3)                 *TSS<---------LBD16 ---ANAC58         <---------ANAC58            <---------ARR11(3)            <---------MYB52(1) ---ANAC58    <----------DOF2                 <---------CCA1(2)        ------>ZmHOX2a(1) --------->LBD16   ccattaaaaatgcttccttttgcgtcgaaacagagaagagttttgcctaaatcttaaaaatcgcaaatgagtcctgtccatttgttttttccggtttggt  17807100                 ------>ZmHOX2a(2)               <---------AGP1               --------->ARR11(3)               --------->ARR14(2)               <---------ARR11(3)               <---------ARR14(2)         <---------AHL20(2)                                                                        --         --------->ATHB12                                                                          <-        <---------AHL20(2)                                     --------->MYB52(1)                 <--        <---------AHL20(1)                                     ------>MYB83                       <--        --------->AHL20(2)              ---------->DOF2        ------>MYB46(1)                    ---   ------------>CBF <---------TOE1(2)   <<<<<<<<<<<<WRKY18   <---------MYB52(2)       <------ZmHOX2a(1) ---MYB46(3)  <---------CCA1(2)     <-----------HVH21       --------->DEAR3(2)        =============== --AtMYB61<------------CBF         ----------->GT1         ------->TEIL   <---------YAB1<------ZmHOX2a(2) ->MYB59--------->AHL20(1)<---------LBD16        ------------>CBF   ------->TEIL  ---------->DOF2 ---   tcgattccaatttattggatcttgggttttcggaaacaggtcaaaagtcaaaccaattctgaaccgaacgaatgttatcaaactgaaaggatcaaaccaa  17807200          <---------TOE1(2)       ------>ZmHOX2a(2)     <---------ARR14(2)     --------->ARR11(3)     --------->ARR14(2)     <---------ARR11(3)     <---------AGP1    <---------CCA1(2)           <----------DOF2 ------->ATHB12              <---------ARR11(3) --------AHL20(2)            --------->ARR11(3) -------AHL20(1)            <---------CCA1(2)                                                       - -------AHL20(2)           <---------AHL20(2)                                                  <----- ------>AHL20(1)    --------->YAB1                      <-----------GT1        --------->ZAT14------- =============HOX2a_HOX2a<---------YAB1            --------->AHL20(2)  <---------AHL20(2)   --------- ------>AHL20(2)    <---------ICU4                 <---------AHL20(2) --------->AHL20(2) <---------YAB1   tttattggatcttgggttttaatcagtattatatctttttgaggtctctatatttatttcactgaatttcgatttattttgttcagtccatatgattcgg  17807300                                                                                                    -                                                                                                <----                                                                                             --------                                                                                            <-------MYC3                                                                                            ------->MYC3                                                       <------MYB83                        --------->ANAC55(2)                                                       <------MYB46(1)                     --------->ANAC46                                                      --------->MYB59       =========================bZIP_DOF                                                  <------MYB46(1)     <---------ZAT14      <---------ANAC46                                             --------->ATHB12         --------->ZAT14      <---------TGA1a      <---------AHL20(2)                    <---------YAB1            --------->ZAT18      <---------ANAC55(2) -------->YAB1                         <---------AHL20(2)             <---------ZAT18      --------->O2 ----ANAC46                           --------->AHL20(2)             <---------ZAT6        --------->TGA1a -->MYB59                         <-------TEIL    <------MYB83      <---------------AtSPL8 ========== >ARR14(1)               <---------YAB1--------->AHL20(2)     <---------YAB1---------->DOF2<---------O2   tataagaattaatctatagtttgagttaatattcggttcatttattttgatttggttcggttttatgcttagtgtacataaaacgatgtgttcacgtgaa  17807400                                   --------->AHL20(2)                                   <---------AHL20(2)                                  --------->AHL20(2)                            <---------MYB46(3)                            --------->MYB55(2)                            ----------->GT1                           --------->ALFIN1             <------ZmHOX2a(2) >>>>>>>>>GT-1            <-----------HVH21<-------GAMYB         ------>NtERF2     <---------AtMYB61  ----------->HVH21     --------->ALFIN1 <-----------HVH21      <------NtERF2 -------->LBD16         <---------DEAR3(1)                                                   <------- -----ARR14(2)    <-----------RAV1(2)     --------->AHL20(2)                                 -------- --->HVH21<------NtERF2------>NtERF2    ----------->GT1--------->ANAC46   --------->YAB1    --------- ====================================MYC_MYB   <-----------GT1         --------->YAB1      <---------   accggtgaaggcgcgatcagacaggcgcggtggttaataaataagttaataacttactcgttactagggccgataatcgtggttttgaacgcgcgtttac  17807500                                                 <---------ANAC58                                   <-----------TGA1     <---------ANAC46       --------->YAB1       <---------ANAC58                                 <--     <---------ANAC58       <---------ICU4 --------->ATHB12 --------->TOE1(2)              <------NtERF2     <---------ANAC58    --------->YAB1 <---------ICU4      --------->TOE2(2)             ------>NtERF2 <------------CBF     --------->YAB1   --------->ICU4      *TSS      <---------TOE2(3)   <---------ANAC46 --ARR14(2)     --------->YAB1 <---------ICU4    <---------ANAC46   ---------->DOF2    <---------ATERF1(1) ->ARR14(2)   <------------CBF<---------YAB1 <---------MYB52(1)    --------->AHL20(2)  --------->LBD16 >DOF5.7(2)------------>CBF<---------YAB1 <---------YAB1<---------ZAT14                ------>NtERF2 -DOF2 <---------MYB52(1)<---------ICU4<---------YAB1   <---------ARR14(2)           <---------LBD16   gagaattgcgttagccaattgtattcatcatcatcatcgtcatcatcgttggggtgagtatacatacgattaaagaaacccaaaaactccggcgtctgtt  17807600  Previous    Next  AGI:  At2g42770.1    Description:  peroxisomal membrane 22 kDa family protein. similar to peroxisomal membrane 22 kDa family protein [Arabidopsis thaliana] (TAIR:AT5G43140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69923.1); contains InterPro domain Mpv17/PMP22; (InterPro:IPR007248) Range:  from: 17805362    to: 17807083    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g42780.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK92704.1); contains InterPro domain RNA polymerase II transcription factor SIII, subunit A; (InterPro:IPR010684) Range:  from: 17807559    to: 17809893    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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