Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ATHB51     --------->ATHB12    <---------YAB1    <---------AHL20(2) <---------KAN4(2) ------->GT1                                                            <-----------GT1 ---->ALFIN1                                                  ----------->GT1   --------->AHL20(2) ---ANAC58                                                ---------->DOF2 --------->ANAC46 -->ALFIN1                                             --------------->AGL15   <---------ATHB12 ---ANAC58                                          --------->AtLEC2--------->YAB1          --------- ---ANAC46                           --------->ANAC46  <---------------AGL15 --------->WOX13(1)   gggaatattattggcatatagaattatccacaaacttgcacatcattctcaaccatacaaaaaagagtaaaaataaacccaatcaaatagagagaagaaa  17785000                                                                 ------>NtERF2                                                                --------->ANAC58                                                                ----------->HVH21                                                                --------->O2                                                                --------->bZIP60(1)            <---------ATHB12                                    <---------bZIP60(1)   --------->HSFB2a(2)          --------->WOX13(1)                                    --------->ANAC58      <---------HSFB2a(2)      ------>MYB83    --------->ANAC58                     --------->ANAC58          <---------LBD16      ------>MYB46(1) --------->ANAC58                     --------->ANAC46          --------->SPL7    ------->GAMYB   --------->ANAC46                       --------->ANAC58        <---------SPL7----    --------->AtMYB61 --------->ANAC46                <---------ATHB12 <---------ANAC58  --------->ARR14(2) -->GT1 <---------ATHB12 ---------->DOF2          <---------MYB52(2)   <---------ANAC58--------->LBD16   attcaaccaaatcaatcgatacacacgaaaagagacttattgtttgtttgcaactaatcaaacgcgacgacaggcttgtcttcgtcgtccggaatggcca  17785100                                                        --------->ANAC58                                                        --------->ANAC58                                                        --------->ANAC46                                                       ------->GAMYB                                                      <---------ALFIN1                                                     -------->P                                                     ------>MYB46(1)                                                     ------>MYB83           ------>MYB83                             ----------->RAV1(1)           ------>MYB46(1)                         --------->MYB46(3)         --------->MYB46(3)                        --------->AtMYB61        --------->At4g35610                       --------->MYB46(3)      --------->YAB1                         --------->PCF2                   --------->ATHB12     <---------ATHB12                       ------>NtERF2--------->MYB46(3)  <---------ATHB12     --------->MYB46(3)                  <---------HSFB2a(2)            <---------ZAT18   --------->WOX13(1)                    --------->HSFB2a(2)   ------>ZmHOX2a(1)                 <--- ------->HVH21                 <----------DOF2   ------>NtERF2--------->TOE2(3)         --------->MYB46(3)   tgacccaatcaccagcctcggtcttgagcatgcctttgtttttcgcgaccccaccaacacccatccttcaatagtgcaaatgatttgttaaccaatgtta  17785200                                                                                                <----                                                                          --------->ATHB12      -----                                   <----------DOF2                       <---------YAB1<---------AHL20(2)                          --------->ARR11(3)                          <---------AHL20(2)       ------                  <---------At4g35610                                 --------->AHL20(1)    ---------                  --------->At4g35610 --------->YAB1           <---------DOF5.7(2)     --------->AHL20(2)       --------->WOX13(1) <---------ARR11(3)                 --------->DOF5.7(2)    --------->YAB1     <---------MYB52(1)   <---------AHL20(1)                 <---------MYB52(1)    --------->ICU4 ------YAB1  <----------DOF2<-----------GT1          ------>ZmHOX2a(1)<---------AHL20(1)--------->WOX13(1)   tgtttcagttaatcactttcatctccaatatatccccctttgataacattgcatcctagacccgttaactaatatatgatgggccataataaatcaaaga  17785300                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                             --------                                                                                      <---------DEAR3(2)                                                    --------->MYB52(1)                <---------MYB46(3)                                              --------->SPL7                         <---------DEAR3(1)                                            --------->TOE1(2)                        <---------At1g77200   ---------->DOF2                          --------->TOE2(2)                      <-----------HVH21 -----ARR11(3)        ---------->DOF2      --------->YAB1                     *TSS<---------DEAR3(1)< ---->ARR11(3)  ----------->GT1           <------ZmHOX2a(2)                   <-------TEIL   <------- --->YAB1    --------->DAG2     ---------->DOF2    <---------SPL7  <---------TOE1(3)<------NtERF2<--- ->DOF2     ---------->DOF2  ----------->RAV1(1)  <---------MYB52(2)     --------->YAB1   -----------   taattcaaagcccaaaaagtgtaaaaaagcccaacaaagtgacgatcatacgacgaacgatatcaagttaagctatcatgttcgtcgtcggtgagatttc  17785400 ---->NtERF2                         --------->At4g35610 ------->LBD16                 <-----------RAV1(2) ------>LBD16              <---------MYB46(3) -------LBD16              --------->MYB55(2) ->GLK1(1)                <---------AtMYB61 ------NtERF2             --------->ALFIN1 --GLK1(1)               <---------MYB52(1)                                                   ------- ------LBD16          <---------LBD16<---------At4g35610                                    <-------- >ARR10 ---------->DOF2 --------->LBD16                 <---------ALFIN1          <------------AtMYB77   ccggcgaagcgaaagcagtgtttctccggtggttcaggcatcagtctgatttcagacaacacatctcatagtaatttgattctaactggcgatttcactc  17785500                                                                                           --------->GLK1(1)                                                                                           <---------GLK1(1)                                                                             <------ZmHOX2a(2)                                                              <---------ANAC58          --------->ANAC58                                                            <---------ARR11(3)          --------->ANAC58                           <---------ZAT2                   --------->ARR11(3)  --------->LBD16                           --------->ZAT2                  --------->GLK1(1)--------->ARR14(2)    <--                           <---------At4g35610             <---------GLK1(1)<---------ARR14(2)    <-- -->ZAT6                   --------->At4g35610  ------>ZmHOX2a(2) ---------->ID1<---------HSFB2a(2) ---GT1               <---------HSFB2a(2)   ----------->HVH21 <---------ANAC58------>ZmHOX2a(2)   ---   tagctcgaccaattgtatccaattctcgtagctgagagcaatggctctgatcgatgtcgcgatatcttgtctcaattcgatccgcgaagtaagaaatccg  17785600             <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                             --------->ATHB12            <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                              --------->YAB1            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <--------HAHB4           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               <---------ICU4           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              -------->ATHB1          <------------------------ANAC81                                  <---------ATHB12          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        ----------->RAV1(2)          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         --------->At4g35610         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <---------At4g35610         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    --------->At4g35610        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    ----------->RAV1(2)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    ===================RAV       <------------------------ANAC81                        <-----------RAV1(1)     <------------------------ANAC81                         ------>ZmHOX2a(2)    <----------DOF2                                         <---------At4g35610 -------ARR14(2)                                <-----------GT1<---------At4g35610            <------ -------GLK1(2)                 <---------At4g35610  <-------MYC3   ------->TEIL <---------YAB1 ----- ------>ARR14(2)                ----------->RAV1(2)  ------->MYC3  <---------ALFIN1           -------   aattctcttttttttttttttttttttttttttcatctggtctcatcttgttacacgttttgatctgctgcacctgaatcattacgatttctccatgatc  17785700                                         --------->TOE2(3)               <---------CCA1(1)                                         <---------MYB59                 <---------RVE1(1)                                       ------->TEIL                     --------->ARR11(3)                                   --------------->AtSPL8       --------->MYB59     <---------ANAC58              <---------------AtSPL8       <---------TOE2(3)     <---------ANAC58         ----------->GT1         ------>ZmHOX2a(1) <---------ARR11(3) ---ARR11(3)   <---------ANAC58    --------------->AtSPL3   --------->ANAC58 ->ZmHOX2a(2)  <---------ANAC46    <---------------AtSPL3   --------->ANAC58                        - -->ARR11(3)   <---------ANAC58   ---------->DOF2  --------->ICU4      <<<<<<<<<RAP2.2        <------   tcgttttgctcgtttttgtgtgttcttgggaaatgtaaaagtaccttactgtaatcctgaacaagtaaggtttagatattttggaaatgttttgttttgt  17785800                                                   ---------->DOF2                                             <---------At4g35610                                             --------->At4g35610                                             <---------ZAT14                                             <------NtERF2                     <----------DOF2                                             --------->ZAT14                   <---------MYB52(1)                                         ------>NtERF2                   <----------DOF2                                       <---------ANAC58                 <---------HSFB2a(1)              ---------->DOF2          <---------ANAC58                 --------->HSFB2a(1)        <------ZmHOX2a(1)             <---------ZAT2                   --------->At4g35610 -------->CCA1(2)                     --------->ZAT2                 <------ZmHOX2a(1) ---ANAC46----------->GT1  <---------ANAC46  --------->ZAT18--------------->AGL15   agatagaagaggatgtaaaagatgcgattgtgtatatcgatgctggctgcacagaaagttttcaatttgtaggagctttccctttgttcttggaactagg  17785900  Previous    Next  AGI:  At2g42700.1    Description:  similar to hypothetical protein OsI_034052 [Oryza sativa (indica cultivar-group)] (GB:EAY80093.1); similar to hypothetical protein LOC_Os11g06810 [Oryza sativa (japonica cultivar-group)] (GB:AAX93012.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69888.1); contains InterPro domain Sec1-like protein; (InterPro:IPR001619) Range:  from: 17785378    to: 17789214    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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