Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ARR11(3)                                               <---------ARR11(3)                                              <---------CCA1(2)                    <---------AHL20(2)   --------->ARR11(3)                   --------->AHL20(2)   <---------CCA1(2)                   <---------AHL20(1) <---------AHL20(2)               --------->AHL20(2)   --------->AHL20(2)                                  --------->AHL20(2)               <---------AHL20(2)<---------AHL20(2)                      --------->ARR11(3)               <---------YAB1   --------->AHL20(2)                   ---------->DOF2 --------->YAB1          <---------AHL20(2)   <---------AHL20(2)    --------->TOE2(3)   <---------ARR11(3)    --------->YAB1 <---------AHL20(2) --------->AHL20(2)          --------->AHL20(2)----------->GT1   catgactcatattttatataattaatttcatattttaaatttatatctatatctacattaacatgaaataaaaaagatttcatgtattgataaaataagc  17772200                  --------->ARR11(3)                                        --------->ARR11(3)                  <---------ARR11(3)--------->YAB1                          --------->GLK1(2)                 <---------CCA1(2)  <-----------GT1                         <---------ARR11(3)               ------>ZmHOX2a(1) --------->WOX13(1)                        --------->CCA1(1)        --------->ATHB51     <-----------GT1                    --------->ANAC58        <---------ICU4   <---------ARR11(3)                     --------->ANAC58       <---------YAB1    --------->ARR11(3)     ---------->DOF2 --------->ANAC46       --------->ICU4   <---------CCA1(2)     <---------HSFB2a(2)          --------->RVE1(1)     --------->YAB1 --------->TOE2(3)         --------->HSFB2a(2)        --------->AHL20(2)    ------   tagtttgtcataatttcctatatcttaaatcttaccaattaccatcttctaaaagtttctcttaccacacaaaaaaaaaatcttcaaaacatttctccta  17772300                                                                                                 ----                         ----------->RAV1(1)                        --------->ANAC58             <---                --------->AHL20(2)                         <----------DOF2       ----------->GT1-----          <------ZmHOX2a(1)                        <---------YAB1   --------->ANAC46            <---- >ZmHOX2a(1)    <---------AHL20(2)        --------->AHL20(2)        --------->ANAC58        ---------   tgcaaaacttgaggacaatttataaaacaacatagttaagcccattaactaatattatgggccttaagaaacgcaaaacaaactcgtttaatagaaaaga  17772400                                        <---------YAB1                                        <---------AHL20(2)                                        --------->AHL20(2)                                       <---------AHL20(1)    --------->At4g35610                --------->AHL20(1) ----->GLK1(1)                --------->YAB1 ------GLK1(1)               <---------YAB1                           <----------DOF2 ---->ARR11(3)            --------->AHL20(2)                  <---------YAB1 -----ARR11(3)            <---------AHL20(2)            --------->MYB46(3)                        --- ->DOF2             <------ZmHOX2a(1)  --------->AHL20(2)    --------->AHL20(2)             ---------   tttctccgatgcaaaaacttgaggacaatttatgaaaacaatataattaagcccattaaccaatattatgggccttaagaaacccaaaacaaactcgttt  17772500                                                                                                 ----                                                                                              -------                                                                                              -------                                                                                             --------                                                                                             ------>NtERF2                                                                                             <-------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           --------->RRTF1(1)                                                                                           --------->ERF1                                                                                           --------->RAP2.6(1)                                                                                           --------->DEAR4(2)                                                                                           --------->ATERF1(1)                                                                                         --------->DEAR3(1)                                                                                         --------->ANAC46                                                                                         ------->GAMYB                                                                                    --------->LBD16                                                                                   --------->RAP2.6(2)                                                                                   --------->ANAC58                                                                                   --------->RAP2.3(2)                                                                                   --------->RRTF1(2)                                                                                   --------->ANAC58                                                                                 --------->ZAT2 -----                                                                               <-----------RAV1(2)<--                                                                            <---------At4g35610------                                                                            --------->At4g35610<-----                                                                            <---------ZAT2 --------->ORA47(2)                                                                            --------->ZAT2 --------->RAP2.3(1)                                                                         --------->LBD16<------------AtMYB77                                                                       --------->ANAC46 <---------MYB55(2)                                                                     <---------ALFIN1   --------->MYB46(3)                                                                     --------->AtMYB61  --------->DEAR3(2)                                                                    <---------MYB55(2)  --------->ATERF1(1)                         --------->ARR14(2)              <----------DOF2--------->DEAR3(1)<---------ATERF1(1)                         <---------ARR14(2)              *TSS    <---------ETT(1)<---------At4g35610                         ------->TEIL               <----------DOF2 --------->MYB46(3) <---------ATERF1(1)                        <---------CCA1(2)        <-----------GT1 --------->DEAR3(1)--------->ANAC46                        <---------GLK1(2) --------->TOE2(3)      ----------->HVH21--------->RAP2.3(1) ------->DOF2 --------->LBD16             --------->TOE1(3)    ------>ZmHOX2a(1) --------->At4g35610 -->GT1    ------>ZmHOX2a(1)        --------->ANAC46<---------DAG2------>NtERF2---------->CDC5<------NtERF2   aaaagtcatcgtcctccgtaaaccctgaatcttccttcacagaaccctaaataacttttcttttcctccgaccaccgcagctcagccgcaaccgccgcca  17772600 ----->MYB46(3) -->ERF1 -->ATERF1(1) ->ABI4(1) --ATERF1(1) >ANAC46 >ANAC58 >RAP2.6(2) >ATERF1(2) -ATERF1(2)                                                                                      <--- >DEAR3(1)                                                                                       <--- >RAP2.3(2)                                                      --------->ANAC58                ---- >RAP2.3(3)                                           ---------->DOF2                        <------- >ANAC58                                             <---------WRKY38(1)                    <-------- >RRTF1(3)                                           <---------WRKY45                       <-------- >RRTF1(2)                                           <---------WRKY12                     <---------ALFIN1 >DREB2C(2)                                         --------->WRKY18(1)                 ----------->RAV1(1) ->NtERF2                                  <---------TOE2(3)     --------->ANAC58    --------->ANAC58 -------ALFIN1                             <---------TOE1(3)     <----------ID1      --------->ANAC58 --->DEAR3(1)                  <---------------------WRI1        ----------->GT1   ---------->DOF2 ----ALFIN1                  <---------ETT(2)      <-----------HVH21         <------ZmHOX2a(1)   ----   ccacttatgtcaagagtaagtcccaagactgtggacgatgcagttaaggctctggtcaaagagggaaacgaaaaatcaaggacggagaagccacagcttc  17772700                                                                                            <--------                                                                                           --------->LBD16          <---------GLK1(2)                                                            --------->ARR14(2) ------HSFC1(1)                                                                        <---------ARR14(2) ------HSFB2a(2)                                                                    --------->ANAC46 ----->HSFC1(1)                         --------->HSFC1(2)                          --------->ANAC58 --GLK1(2)<---------ARR14(2)            --------->HSFB2a(1)                         --------->ANAC58 -At4g35610   <----------DOF2           <---------HSFC1(2)<-----------GT1          <---------LBD16 -ZAT2    --------->ARR14(2)            <---------HSFB2a(1)    ------->TEIL    ------>ZmHOX2a(1)  <-- ----->HSFB2a(2)                  ---------->DOF2   <------ZmHOX2a(1)  --------->YAB1--------->LBD16-   tagaagaagacggattcttttacctagtcgtagccctaaagaagattccacagaggaattttacgaacgcttatcgtattcctctcccgcatccgctaat  17772800                     --------->At4g35610                     --------->GLK1(1)                     <---------ZAT2                     --------->ZAT2                     <---------At4g35610          ---------->DOF2                     <---------GLK1(1)  ----------->RAV1(1)            ------------------------>ANAC81    --------->MYB52(1)                  ------>NtERF2                 <---------HSFB2a(1) -MYB52(1)        --------->LBD16      --------->ANAC46        --------->DEAR3(1) ---------GT1   <---------LBD16 <---------YAB1  ----------->HVH21  <------ZmHOX2a(1) -------->ZAT6 --------->MYB52(1)      --------->ETT(2)    ----------->HVH21   >>>>>>>>>TBF1   taacactaccgaagactcaccggagctctgtctcatcatcgacgacagacctgaaagtggtctcaccgaggaagatgcgaagaagaatatcaaatcagag  17772900            ---------->DOF2          --------->ANAC46                                                       <-------TEIL          --------->ANAC58                                                   <---------YAB1          <---------ANAC55(2)                                     --------->ANAC58          --------->ANAC58      --------->ZAT2                    --------->ANAC58    --------->ANAC46        --------->YAB1          <---------At4g35610  --------->KAN4(2)   <----------DOF2       <---------ATHB12         <---------ZAT2      --------->KAN4(1)  --------->HSFC1(2)      ------>MYB46(1)           --------->At4g35610 <---------HSFB2a(1)<---------HSFC1(2)      ------>MYB83    <---------TOE1(3)            <------ZmHOX2a(2)   <---------HSFB2a(1)     --------->WOX13(1)  <----------DOF2       <---------TOE2(3)--------->MYB52(1) --------->TOE1(2)   aacataccaatcacgaaagttgttaagctttcgaagctgaaatcggattatggatcattcgaatcgaaacggaagctttgtgattcatacgatatgtttt  17773000                    <---------TOE1(2)                    <---------TOE2(2)                   ------>ZmHOX2a(1)          ----------->GT1     =====================HOX2a_HOX2a     ------>ZmHOX2a(2)              <---------WOX13(1)    ======================HOX2a_HOX2a          <---------ARR11(3)               --------->ATHB12    <------ZmHOX2a(2)             --------->ATHB12                    <-----------RAV1(1)   <---------ARR14(2)     ----------------->AGL1  <----------DOF2     ------>ZmHOX2a(1)   --------->ARR14(2)<-----------RAV1(1)       --------->ARR11(3)   ----------->RAV1(2)   tctcagatcggagagtgattcctatgttgccaaaattgattgggaagaagttctttcagagcaagaagactcctgtggctattgatttgaagcatatgaa  17773100  Previous    Next  AGI:  At2g42650.1    Description:  60S ribosomal protein-related. similar to 60S ribosomal protein-related [Arabidopsis thaliana] (TAIR:AT3G58660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70027.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65947.1); contains InterPro domain Ribosomal protein L1; (InterPro:IPR002143) Range:  from: 17772557    to: 17773965    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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