Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ----------->RAV1(1)                                                ------->GAMYB                                               --------->ANAC46                                               --------->ANAC58                                               --------->ANAC58                                     --------->HSFB2a(2)                                     <---------ANAC58                                     --------->ANAC55(2)                                     --------->ANAC46                                  --------->ARR14(2)                                         --------                                  <---------ARR14(2)                                       --------->ZAT14          <-------TEIL  --------->YAB1--------->LBD16                                      <---------ZAT18         --------->CCA1(2) <---------ICU4    --------->MYB52(1)                            --------->ZAT18        <---------ARR14(2)--------->ICU4  --------->ZAT6                                   <---------ZAT14   --------->MYB52(1)  <---------YAB1<---------ANAC55(2)                <----------DOF2  <---------ZAT18 --->AtLEC2  --------------->AtSPL8  <---------ANAC58                 ------->TEIL       --------->ZAT18 ->YAB1 --------->ARR14(2)<---------YAB1--------->SPL7     ---------->DOF2              <---------ZAT6   caaattaacagatacaatgtactatatcataattcgtttccgtaacacaacgcaacaatttgaaagtagatgtactttagtacttagttagtgtgcacca  17735400               --------->MYB46(2)               --------->MYB111(2)               --------->MYB111(1)                    --------->TOE2(3)               --------->MYB59                  <---------TOE2(3)               --------->MYB52(2)         --------->AHL20(1)                  --------->DAG2             <---------MYB52(1)           --------->AHL20(2)      <---------AHL20(2)        <---------REM1(1)                 <---------AHL20(1)     --------->AHL20(2)       --------->ARR11(3)                 <---------AHL20(2)     <---------AHL20(2)   ---------->DOF2        ----------->GT1<---------------AGL15 --------->TOE2(3) --->RAV1(1)------------>MYB.PH3(2)   <---------AHL20(2)     <-------TEIL    ---------->DOF2   aaaaaaaaagatgtagttagttagtaaggggttaaatgttttaatttattaagaaaacttaaattcattaaatgttagaaaaagtctaattagtttatat  17735500                                                              <---------AHL20(2)                                                              --------->AHL20(2)                                                              <---------AHL20(1)                    ---------->DOF2                           --------->AHL20(1)                 <---------AHL20(2)                     --------->YAB1        --------->At4g35610                            <---------AHL20(2)                       -----      <---------ZAT14                              <---------AHL20(2)               <---------AHL20(2)      --------->ZAT14    <---------WRKY12          --------->AHL20(2)  ---------->DOF2          =====      <---------ZAT18--------->DAG2         ----------->GT1--------->YAB1   <---------At5g28300------  --------->ZAT6 --------->AHL20(2)     <---------ZAT14--------->AHL20(2)  <-----------GT1     ------   tcgaacactgtgctcaaaattaaaaagtcaactattttagactatagagtttattaattaataataaattcgataaatcaccgtattattttcttcaacg  17735600                <---------O2                                                                        <                --------->O2                                                                      ---                --------->TGA1a                                                                 <----                --------->ANAC58                                                             <-------                --------->ANAC46                                                            <--------                <---------ANAC55(2)                                                       --------->ICU4                <---------TGA1a                                                        <---------MYB52(1)                --------->ANAC58                                  <---------ARR11(3)  --------->LBD16       --------->LBD16                                          --------->ICU4       --------->TOE2(3) -->GAMYB--------->REM1(2)   ----------->GT1           <------ZmHOX2a(2)             <---------ANAC55(2) =========================MYC_MYB                     <---------ARR11(3)             --------->ANAC46 --->MYB46(3)  <---------LBD16                        --------->ARR11(3)             --------->ANAC55(2) --->ANAC46   --------->CCA1(2)                 >>>>>>>>>TBF1 --------->YAB1----------->GT1<---------ICU4   acaagtagccgtgaagacacgggagcgaagagagataaacagaagatgaagaagaagatcaatgtcataatcttcagggagataaatccgtaatctttat  17735700                                                                          <----------DOF2                                                                     ------>ZmHOX2a(2)                                                                     =======================HOX2a_HOX2a                                                                    <------ZmHOX2a(2)                                                                    ========================HOX2a_HOX2a                                                                   --------->AGP1                                                                   --------->ARR14(2)    ----------->GT1                                                <---------ARR11(3)   <---------TOE2(3)                                               <---------AGP1   <---------TOE1(3)                                               --------->ARR11(3) ---------ATHB12                         <---------ANAC46          <---------ARR14(2)     <----------DOF2 ------>WOX13(1)                         <---------ANAC58      <---------ANAC55(2)<-----------GT1 -----YAB1           <-----------GT1     <---------ANAC58      --------->ANAC55(2)---------->ID1 --YAB1      ------>ZmHOX2a(1)       <----------DOF2         <-----------GT1  <----------DOF2*TSS --DOF2      <----------DOF2 --------->TOE2(3)   <----------DOF2  <---------GLK1(1)  ------>ZmHOX2a(1)   taatcaaggttaatccttttttttttcttcatcttaattctttgcgtcttccttttctatttatcacgagatctgtctttctttttcctcttctttctct  17735800                                         --------->HSFC1(2)                                 ----------->GT1   <---------AtMYB61                                 <---------ANAC46<---------MYB46(3)                               --------->LBD16   --------->MYB55(2)                              <---------DEAR3(1)--------->ALFIN1                      <---------ZAT2                             --------->SPL7     <---------AtMYB61                     --------->At4g35610                             <---------LBD16    <---------DEAR3(1)                    --------->ZAT2                           <-----------HVH21 <---------DEAR3(1)                       <---------At4g35610                       <-----------GT1   <---------HSFC1(2)                >>>>>>>>>TBF1             --------------->AtSPL8   ---------->DOF2           <---------ZAT14---------->DOF2   ctcttctctctgaagacagtacttgtttctgtccggcgttaaaagcttcggtggtggtctcttgacttctctgagaagaagaaaaggaagctgagtctca  17735900                     ----------->HVH21                <---------TOE1(2)                     ----------->TGA1               <-------GAMYB           --------->ATHB12             <---------O2                          <---------ANAC58        <---------ATHB12          ----------->HVH21                        <---------ANAC58      --------->WOX13(1)   xxxxxxx        <---------At4g35610                     <----------DOF2        <-------TEIL      <---------ANAC58        --------->At4g35610             <---------HSFC1(1)  --------->TOE1(2)            <---------ANAC46        --------->ZAT2                  --------->HSFC1(1) <---------HSFC1(2)            <---------ANAC58        <---------ZAT2                  <---------HSFB2a(2)<---------HSFB2a(1)           <---------ANAC55(2)     <-------TEIL<------ZmHOX2a(1)      --------->HSFB2a(2)--------->HSFB2a(1)           --------->ANAC55(2)   ttttagattcagctcacgaggaagtgacgacgatgtctcattctagaagactttcgttggaacctgctatagattcaatcactggtcgatttcgtgattt  17736000                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                              --------->ALFIN1                                                                             <-------MYC2                                                                             <-------MYC3                                                                             <-------MYC4                                                                             ------->MYC4                      ------->GAMYB                                          <-------PIF5               --------->O2                                                  ------->MYC3               <---------ANAC46                                              ------->PIF5               --------->TGA2(1)                                             ------->MYC2               <---------bZIP60(1)                                          <---------bZIP60(2)               <---------O2                                                 --------->O2               <---------TGA2(1)                                            >>>>>>>>>>HY5               --------->bZIP60(1)                                          --------->bZIP60(2)              ----------->STF1                                              <---------TGA1a              <-----------STF1                                              --------->TGA1a             <---------TGA2(2)                                              <---------O2            <            ----------->TGA1                                                <---------PIF3(3)       -          --------->YAB1           <---------HSFC1(1)                    ---------------->PIF3(2)   <          <---------ICU4           --------->HSFC1(1)                ---------->DOF2                -         <---------YAB1            --------->HSFB2a(2)            --------->TOE1(3)              ----         --------->ICU4      <---------GLK1(2)                    --------->TOE2(3)  <---------At4g35610       --------->YAB1--------->MYB46(3)                  ------>ZmHOX2a(1)  --------->PIF3(3)    <---      --------->ICU4 <---------MYB52(2)           <---------GLK1(2)  =================bZIP_DOF   ---- xxxxxxxxxxxxxxxx>smallRNA(i2)     <---------HSFB2a(2) ----------->RAV1(2)  <<<<<<<<<<HY5  <<<<<<<<<TBF1   acagagaaatgatgatgacgtcaacaaacctgattttcgagaactcgatctaggttctcctgtttctaccttaatgccacgtggctctgcttcttcttcc  17736100                                                        <---------MYB46(3)           ------>ZmHOX2a(1)                            <---------DEAR3(2)          <---------At4g35610     <---------ATERF1(1)      ----------->RAV1(2)      <---------DEAR3(1)        <---------MYB52(1) ---------At4g35610        <----------DOF2             <---------At1g77200     ----------->GT1 -------->ZAT2      --------->ARR14(2)                <---------------------WRI1<-----------HVH21 ---------ZAT2      <---------ARR14(2)                <---------MYB52(1)    --------->MYB52(1) -------->At4g35610--------->At4g35610               <-----------HVH21 ----------->GT1 ----->At4g35610   <---------At4g35610      --------->HSFB2a(2)     <---------At4g35610    <---------ANAC58 ------At4g35610   <---------ZAT2           <---------HSFB2a(2)     --------->At4g35610    <---------ANAC58 ----->LBD16       --------->ZAT2      <---------At4g35610        <-----------RAV1(2)    <---------YAB1   gctgctgcgactcctactagcagctctggctcttctggctctgcttctggtaaaccgtcggtgagttctcagatggctaaacggttagatgatgcttaca  17736200                                             --------->ANAC58                                             --------->ANAC46                                        ------>NtERF2                                       --------->DEAR3(1)                                   <---------GLK1(1)                                   --------->GLK1(1)                               <---------ANAC55(2)                               --------->ANAC55(2)                               <---------HSFB2a(2)                               --------->HSFB2a(2)                            ------>ZmHOX2a(2)                              <---------LBD16--------->ANAC58               <-----------ARR10                              ------>ZmHOX2a(2)      --------->ARR14(2)     --------->ARR14(3)                             <------ZmHOX2a(2)       <---------ARR14(2)     --------->ARR14(2)                            <---------ARR14(2)       <---------GLK1(2)      --------->ARR11(3)                          --------->LBD16    ----------->HVH21              <---------ARR14(2)               <----------DOF2<-----------------------TaNAC69(2)            <---------ARR11(3)             --------->At4g35610  ---------->DOF2  --------->LBD16          <---------ARR14(3)             <---------At4g35610--------->LBD16  <---------LBD16  <-----------HVH21          --------         <---------MYB52(1) --------->ARR14(2)<---------ALFIN1  --------->LBD16              --------        --------->LBD16  --------->LBD16--------->ORA47(1)    <---------LBD16<------ZmHOX2a(2)   <---      <---------LBD16   <---------LBD16<---------ETT(1) --------->TOE2(3) ----------->ARR10  --------   agagtcattccggtgagctttctagccccggatccggaatgccgaccacgacccggattcttaaaccgggtcatagaagatcttcttctactggcacgcc  17736300  Previous    Next  AGI:  At2g42580.1    Description:  TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); protein binding. similar to TTL4 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 4), binding [Arabidopsis thaliana] (TAIR:AT3G58620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62839.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69870.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterP Range:  from: 17735793    to: 17738796    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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