Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     ------>NtERF2                                                                  --------->ANAC58                                                                  --------->DEAR3(1)                                                               ----------->HVH21        <-----------GT1                                   ------>ZmHOX2a(1)   <----------DOF2                                    --------->ARR11(3) -------At4g35610                                     --------->ARR14(2) ------>ZAT2                                          --------->KAN4(2) ------>At4g35610         <---------ZAT2              <---------ARR14(2) -------ZAT2              --------->ZAT2              <---------ARR11(3)                          <<< --------RAV1(1)          --------->At4g35610        <---------GLK1(1)                        ------>ZmHOX2a(1) ----At4g35610            <---------At4g35610       ------->TEIL  --------->ANAC58------>ZmHOX2a(1) >ZmHOX2a(1)      --------->WRKY12               <---------ATHB12--------->ATERF1(1)<----------DOF2   tgctgcttttatactatccattgacttctgctgagcattggctctatacccatgaatatcctctagcgacgccttctcatgctcctctttctcatccttc  17723600                                                                                                    <                                      --------->MYB52(1)                                         ----                                --------->HSFB2a(1)                                             -----                                --------->HSFC1(2)                                             <-----                                <---------HSFC1(2)  <---------At4g35610                        ------                          <-----------GT1------->GAMYB                                    --------->At4g35610             <---------GLK1(2)  <---------HSFB2a(1) ----------->RAV1(2)                 --------->REM1(1)           --------->LBD16--------->MYB52(1)        --------->At4g35610  <---------CCA1(2)<---------At4g35610 <<<<<<TBF1------>ZmHOX2a(1)   ------->TEIL  --------->ALFIN1------>ZmHOX2a(1)        ------>ZmHOX2a(1)   ttcttccctgttcctgaatcgctgctagtaacgaattttccaacggagtgaggcatctgagtcctcttcatcttcgtctctccctctccttcatcagaaa  17723700                                                                                    <---------DAG2                                                                                    --------------->AGL15                                                                                    <---------------AGL15                                                                                   <-----------------AG                                             <---------ALFIN1                      <-----------------AGL1                                             --------->DEAR3(1)                    ----------------->AGL1                                             --------->AtMYB61              --------->GLK1(2)                                          <---------ALFIN1                 <---------GLK1(2)      <-----------GT1                  --------->PCF2                   --------->ETT(1) ---------MYB52(1)                    <-----------HVH21      <---------ANAC58 <---------ICU4------>NtERF2 ----->DEAR3(2)               --------->ANAC58               <---------ANAC58<---------HSFB2a(1) ---->MYB52(1)                --------->ANAC58  <---------DAG2          <---------ANAC46  <---------RAP2.6(2) ----ARR14(2)                <-----------------------TaNAC69(2)      --------->ALFIN1<----------DOF2 --->ARR14(2)             --------->CCA1(2) --------->MYB46(3)   <---------ANAC46  ----------------->AG   ccggcatgttactccccttgtctgagagagacacgaactgtgtcccaccaccttctgtttgatgcctgtgtgtgtcggaatctttgcctttttcggccat  17723800                                                                                           ------>NtERF2                                                                                          --------->bZIP60(1)                                                                                          --------->ANAC58                                                                                          <---------TGA2(1)                                                                                          --------->ANAC46                                                                                          <---------bZIP60(1)                                                                                          --------->ANAC58                 <---------YAB1                            <---------MYB52(1)          ----------->TGA1             <-----------TGA1                             <-----------TGA1             ----------->HVH21            --------->bZIP60(2)          ----------->RAV1(2)<---------ALFIN1    <---------ANAC46  --------->ANAC58               <----------DOF2          <-----------HVH21     <---------ANAC58  <--  --------->ANAC58 <----------DOF2     <---------ALFIN1  --------->ANAC46       <---------ANAC58 ----   ggactcgaaatgactcgtcatctttgggactctgtctttctccacctgaacttctctctccgtcaccttgttttctctccttgcttgctctgacgccatt  17723900           <------ZmHOX2a(2)         ------->GAMYB        --------->MYB46(3)       <---------TOE2(3)                                                                   <---------YAB1      <---------DOF5.7(2)          <----------DOF2                            <---------YAB1      ---      --------->MYB52(1)        <-----------GT1                 <-----------GT1 <----------DOF2   <-- -------YAB1      --------->HSFB2a(2)               --------->YAB1        <----------DOF2 *TSS    --- ----->TOE2(3)    <---------HSFB2a(2)      <---------YAB1   <----------DOF2  <---------ARR11(3)   <--   gttaatgctaacgatcacttccaaaaacacagttttactttcaagatgatagtttgataatgcttttttctgttttctttatctttgttgattcttatcg  17724000                                                                                 --------->ALFIN1                                                                               <---------O2                                                                               <---------ANAC58                                                                               <---------TGA1a                                                                               --------->TGA1a                                                                               <---------ANAC46                                                                               <---------ANAC55(2)                                                                               --------->ANAC55(2)                                                                               --------->O2                                                                               <---------ANAC58                                                                               <---------ANAC55(1)                                                                               <---------bZIP60(2)                                                                              ----------->STF1                                                                   ---------->DOF2--------->REM1(2)                                                            <------------CBF----------->HVH21                      --------->YAB1                       --------->ATHB12 ----------->TGA1           ------>ZmHOX2a(1)                              <---------YAB1   <-----------HVH21 --------->At4g35610 <---------YAB1                    --------->ICU4     --------->ALFIN1  <-------- ------>ZAT2  <----------DOF2                       --------->WRKY18(1) <---------ANAC46 <---------ZAT14 -------At4g35610  --------->YAB1                  <---------RAP2.6(3)  --------->ALFIN1 --------->ZAT18 ------>At4g35610 <---------YAB1   <----------ID1  <-----------HVH21 --------->DAG2   <---------ANAC46 -------ZAT2  <---------DAG2     ---------->DOF2 <---------DEAR3(1)======================bZIP_DOF   agctgcttaagtcctgctttataatcatagaaccgaaaagacaaaatttgggcggtcatgaagattggagaaaggtgtgtgacgtgttgagtttactatt  17724100                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                      <-----------ARR10                                                                                      <---------ARR11(1)                                                                                      <---------ARR14(2)                                                                                      ------->TEIL                                                                                      --------->ARR14(2)                                                                                     <---------CCA1(2)                                                                                   --------->O2     -                                                                                   --------->ANAC55(1)                                                                                   --------->ANAC55(2)                                                                                   --------->ANAC58 -                                                                                   --------->ANAC58 <                                                                                   --------->ANAC46 -                                                                          <----------DOF2 -----------    --------->REM1(2)                                                     ===========================   --------->ALFIN1                    <---------GLK1(1)              ----------------------->TaNAC69(2)  ------->MYC3                 <---------ANAC46            --------->ANAC58      <---------ALFIN1   <  <-------MYC3            --------->ZAT2                 <---------ANAC58<---------ANAC58<----------DOF2 <---------ANAC46         <---------At4g35610            <---------ANAC58<---------ANAC58============ -YAB1  <------ZmHOX2a(1) <---------ZAT2 <------ZmHOX2a(2) --------->ANAC58    ------>ZmHOX2a(1)<----   gaaacgtgtaggagaggcacgatgactcagcttgtgggaagagatcagtttcaatattagcgagccaatagtcttgctttcctccacgtatctttccgta  17724200       --------->ALFIN1      <-------PIF5      ------->PIF5      ------->MYC2      ------->MYC3      <-------MYC2      <-------PIF4      ------->PIF4      <-------MYC3      ------->MYC4      <-------MYC4     ====================bZIP_DOF     --------->TGA1a     --------->O2     <---------O2     <---------TGA1a                                                        --------->AtMYB61     ====================bZIP_DOF                                           <---------ALFIN1    ------->TEIL                                                           --------->MYB46(3)    ------------>OsbHLH66                                                ------>NtERF2  --------->ZAT18                                                        <---------ATERF1(1)  <---------ZAT18                                                        --------->ORA47(1) -->LBD16                                                               ----------->HVH21 --ANAC46                                                               --------->DEAR3(1) --ANAC58                                                               --------->RAP2.6(2) --ANAC58             --------->ZAT18                                   ------->GAMYB   --------->CCA1(2) ------>MYC4          --------->ZAT14                                  --------->MYB46(3) ------>MYC2          <---------ZAT18                                  --------->DEAR3(2) -------MYC2          <---------ZAT14                  --------->ZAT6 ------>MYB46(1)  <---------ARR14(2) ------>MYC3          --------->ABI4(2)              <-----------GT1  --------->At4g35610 ------->SPL14     --------->LBD16              <---------ARR11(3)    ------>MYB83 <---------At4g35610 ==============bZIP_DOF   <---------DAG2      --------->ICU4          <---------At4g35610 -------MYC3     <---------LBD16              <---------YAB1       --------->MYB46(3)  --------->ARR14(2) ==============bZIP_DOF   <----------DOF2   --------->YAB1        ------->TEIL--------->bZIP60(2) ---TEIL      <----------DOF2       --------->YAB1 <---------AHL20(2) --------->ZAT2   --------->ARR11(3)   catgtgcacgtggagtctttccggtgcacttttgcctctcatagtctcatgattttatctctactacgaaccagccgaccacttcatcagatatgggctt  17724300                <---------CCA1(2)             <---------ATHB12          <---------ALFIN1                       --------->RAP2.3(3)         <---------ZAT18                      --------->ANAC46         --------->DEAR3(1)        --------->ARR11(3)       <------NtERF2               <---------ARR11(3)       ------>NtERF2              <---------CCA1(2)       <---------ATERF1(1)       <---------ARR11(3)      <---------ATERF1(1)        --------->AHL20(1)      --------->ANAC58           <---------AHL20(1)<------NtERF2   <---------LBD16      --------->ANAC58  --------->MYB59  --------->ZAT6   <---------At4g35610   cttcaggcccgcccactcatctctattaggcccaatatatcttactctaagcccccatttagcttattactcggaaaatttcattagcatactaaattct  17724400                                                                                                   --                                                           <------MYB83                            --                                                           <------MYB46(1)                        ---                                                          <---------AtMYB61                      ----                       ----------->HVH21                 <---------MYB52(1)                    ------                 <----------DOF2                        <-------GAMYB                        --------                <---------ICU4                         <---------ANAC58                    <---------MYB52(2)       <---------MYB52(1)         <-----------GT1      <---------ANAC58               --------->ANAC58      <-------GAMYB  <---------ANAC58                 <-------TEIL                    --------->ANAC58   ------>ZmHOX2a(1) <---------ANAC58                 --------->ZAT18              --------->WRKY18(1)   tcatcctccgttgtataatcttttcttgacatgttttctcatttcacagagtcaagtgcgttggtcttatttaagagttgtttcagtcaagaaacaaaca  17724500  Previous    Next  AGI:  At2g42560.1    Description:  late embryogenesis abundant domain-containing protein / LEA domain-containing protein. similar to ATECP63 (EMBRYONIC CELL PROTEIN 63) [Arabidopsis thaliana] (TAIR:AT2G36640.1); similar to LEA protein [Glycine max] (GB:AAC61783.1); contains InterPro domain Late embryogenesis abundant protein (InterPro:IPR004238) Range:  from: 17721716    to: 17723990    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g42570.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31110.2); similar to unknown [Pisum sativum] (GB:ABA29158.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 17724445    to: 17727158    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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