Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------AHL20(2)       --------->AHL20(2)     --------->AHL20(2)   --------->ATHB51     <---------AHL20(2)   <---------ICU4   <---------AHL20(2)     --------->ATHB12   --------->AHL20(2)    --------->ICU4 --------->AHL20(2)    --------->YAB1                          --------->AtLEC2             <-------- <---------AHL20(2)   <-------TEIL                        --------->REM1(1)               --------->YAB1 --------AHL20(2) <---------TOE2(3)                       --------->ANAC46               <---------YAB1 ------->AHL20(2) <---------TOE1(3)                  <---------ARR11(3)      ------>ZmHOX2a(1) --------->AGL15  <---------YAB1  --------->MYB52(1) --------->ARR11(3)     --------->TOE1(3)       - -DOF2 <---------AHL20(2)<---------YAB1             <---------CCA1(2)       --------->TOE2(3)      <-   tatatatatatatatatgttaagattcattattgacaaacgattttaaaaacatatatctacaccatggaaactcaatcctcaacaaggccattatagtt  17716600                                                               --------->ANAC55(2)                                                               --------->ANAC55(1)                                                               <---------ANAC55(2)                                                          <---------------AtSPL3                                                         <---------ANAC58                                                         <---------ANAC46                          <-                                   --------->TOE2(3)     <---------ANAC58                  <---------ZAT18                                <-----------GT1     --------->YAB1                         <---------ZAT14                       --------->ATHB12             <---------ICU4                         --------->ZAT18                      <---------YAB1               <---------YAB1      ------->TEIL        --------->ZAT14 -YAB1                --------->ICU4     --------->AHL20(1)    --------->ANAC46       <---------ANAC58 -------->YAB1     <---------MYB52(1)    --------->AHL20(2)    --------->ANAC58       <---------ANAC46 --------YAB1 ------------>MYB.PH3(1)    <---------AHL20(2)    --------->ANAC58       <---------ANAC58   gattatagtatgtataaaactgttatgatgggattaaccaaaataaaataactatcatggcgagtacgtaatgtatatgagagtttttgcgagtacacat  17716700                                                           --------------------->WRI1                                                          <---------ANAC46                                                       <---------ANAC58                                                       <---------ANAC58                                                       <---------ANAC46                                                   <-------MYC2                                  <---                                                   <-------MYC3                             <--------                                                   <-------PIF5                         <----------DOF2                                                   ------->PIF5                     <------NtERF2<---                                                   ------->MYC2                     <---------MYB52(1)                                                   ------->MYC3                    ------>NtERF2 <---                                                  <---------O2                     <---------RAP2.6(3)                                                  --------->O2 <---------TOE2(3)   <-----------HVH21                                                  <---------ANAC58                --------->ATERF1(2)                                                  --------->ANAC55(2)             <---------ATERF1(2)                                                  <---------TGA1a                 <---------bZIP60(1)                                                  <---------ANAC58 <---------WRKY12<-----------TGA1 <                                                  <---------ANAC55(2)             --------->ANAC46  -                                  ---------->DOF2 --------->TGA1a<-----------HVH21--------->bZIP60(1)                                  ==========================bZIP_DOF        <-----------RAV1(1)------              --------->O2   ---------->DOF2      <---------bZIP60(2)      --------->ARR11(3)<-------      --------->TOE2(3) ----------->GT1           =================================================bZIP_DOF --------YAB1 <---------O2   ===============================bZIP_DOF      <------ZmHOX2a(1) ---------   gaagatagccttagtcacgagaaaatttgttaaaagaaaagaatatagactcacgtggcttcgttgaggtcatcgaggatgttgccgtcacttttaacgg  17716800                                                                        <---------ALFIN1                                                                        --------->AtMYB61                                                                     --------->ANAC46 <---------CCA1(2)                  --------->ZAT2                   <---------ALFIN1 ------ANAC46                  ------>NtERF2                        ------>MYB83 ---GT1--------->MYB46(3)     --------->DEAR3(1) ------>NtERF2      ------>MYB46(1) ------ANAC58               ------->GAMYB       --------->LBD16     -------->P ------ANAC58              --------->MYB46(3)   ------>NtERF2     --------->AtMYB61               --- ---------ARR14(2)         --------->DEAR3(1) <---------LBD16 <---------SPL7                   <----- -------->ARR14(2) <----------CDC5  --------->At4g35610      <---------DEAR3(2)          <---------TOE1(2) ->GAMYB          --------->At4g35610 <---------ZAT18       --------------->AtSPL3       <---------TOE2(2) --At5g28300      <---------At4g35610 --------->ZAT18    ----------->TGA1               ------>ZmHOX2a(1) >MYB52(1)       <---------ANAC46   <---------At4g35610  ----------->HVH21      <----------DOF2<-----   cgtatatcaacgacttcttgcgctgagcaacgacgacgagctcactcttccggccaactctgacggtaccaacaccactctgctttgctcctacgttgtg  17716900                                                                                         --------->ANAC58                                  ---------->DOF2                                        --------->ANAC58           --------->ANAC46   ------>ZmHOX2a(1)                                          --------->ANAC46           --------->ANAC58   --------->LBD16                 --------->ARR11(3) --------->AHL20(2) ------->DOF2            --------->At4g35610              ---------->DOF2   <------ZmHOX2a(1) ----ANAC46--------->ANAC58 ----------->RAV1(2)    <------ZmHOX2a(1)       ----------->GT1 ---------- ----HSFB2a(2)           <---------At4g35610   --------->ICU4 <---------ARR11(3) <---------AHL20(2)   gaaagaagaacccatgccactgagaacagctcctgataaagacatcgccatgaggactcttaaagatgttttttgggaggaaaataaatacaagaaagag  17717000                                                                                          <----------                                                                                         --------->ALFIN1                                                                                        ------->MYC4                                                                                        <-------MYC4                                                                     <---------ATHB12   ------->MYC3                                                              <---------ETT(2)          <-------MYC2                                                          ------>ZmHOX2a(2)             <-------MYC3                                                         <------ZmHOX2a(2)              ------->MYC2                                                         <---------GLK1(1)             --------->O2                                 --------->MYB46(3)      <<<<<<<<<GATA-2               --------->TGA1a                           <---------ARR11(3)            <<<<<<<<<GATA-3               ==============                       *TSS<-----------ARR10             <<<<<<<<<GATA-4               <---------TGA1a                     ----------->GT1                     <<<<<<<<<GATA-1  --------->GLK1(2)                 <---------At4g35610     --------->YAB1 --------->ARR11(3)--------->ARR14(2)                 --------->At4g35610------------>CBF    <---------AGP1--------->YAB1   <---------O2           --------->DAG2  --------->GLK1(2)            <---------ARR11(3)<---------ARR14(2) >DOF2    ---------->DOF2  --------->ARR11(3)    <-----------TBP ------------>CBF      --------->ANAC55(2)   ttttaagatggagaaagtgagatgagaaaaatctaacctccaatagtatcgttttatagatctctcgaccaatgagaatccaaaactacacgtgtgagtg  17717100                                                                      <---------ANAC58                                                                      <---------ANAC46                                                           <---------ANAC58                                                           <---------ANAC58                                                          --------------->AtSPL8                                                          <-------TEIL<---------ANAC55(2)                                                          --------------->AtSPL3                                                       --------->MYB55(2)                                                       <---------MYB46(3)                                                       <------MYB46(1)<---------ANAC55(1)                         --------->TOE2(3)             --------->MYB52(2)             <------------CBF   --------->MYB52(1)     <------MYB83   --------->ANAC55(2)  <---------CCA1(1)    <---------YAB1                  <---------DEAR3(2)  <---------RVE1(1)   --------->ARR11(3)              <---------TOE1(2)                          ---- --------->ARR11(3)   <---------ARR11(3)              <---------TOE2(2)                        ------ <---------ARR11(3)  --------->YAB1    --------->YAB1<---------MYB52(1)               <---------TOE1(3) -HVH21  <---------LBD16 <----------DOF2            <-------GAMYB     <---------ANAC58<---------TOE2(3) ===================================bZIP_DOF   <XXXXXXXXXXXXXXXXXXXXMIR841B<-----------GT1  ---------   ctagatatttttgcgcattgctattatctttaactatcgaataagaagagttttcgttggttcgtactagttacgtgtaaccatttctatggttaccaaa  17717200          <---------DEAR3(1)          <<<<<<<<<<DREB1C          <<<<<<<<<<DREB1B         --------->ALFIN1         --------->ATERF1(1)         --------->RAP2.6(3)   ------------>MYB.PH3(1)        <-----------HVH21      <-----------GT1   <<<<<<<<<<<<<<<<<<<<<<<DREB1B    <---------MYB52(1)   <<<<<<<<<<<<<<<<<<<<<<<DREB1C <------------MYB.PH3(1)   <<<<<<<<<<<<<<<<<<<<<<<DREB1A<---------At5g28300                               <---------GLK1(1)  ---------->DOF2        ----------->GT1                              <---------AHL20(2) ------->GT1<------NtERF2<---------MYB46(3)                           <-----------GT1 ---->DOF2<<<<<<<<<<DREB1A<-------GAMYB     <-------MYC3          <---------RVE1(1)       <---------AHL20(2) -------->AGL1          <---------TOE2(3)   ------->MYC3         --------->ARR11(3)<---------ARR14(2)   agaaaaaagaggtcggccatcaagttgtggttataaccgttatacacatgttagcatttttggctacgatatttacatgttagcatttctgttttatttg  17717300                                            ----------->GT1                                            <----------ID1                                           ----------->GT1                                           <---------TOE2(3)                                         ---------->DOF2                                        <---------AHL20(2)                                    <---------AHL20(2)                   <---------------AtSPL8                                    --------->AHL20(2)            --------->At4g35610              <-----------GT1   --------->CCA1(2)                 <---------At4g35610           --------->YAB1      --------->ARR11(3)             <---------MYB52(1)           ------->TEIL        --------->TOE2(3)      <---------ARR11(3)           <---------MYB46(3)      <----------DOF2   caactttcaacattaataactagactcgatagagatatatatataaaggaaaaatgtattagtcgttaagctgaaaatgtacaagtctttgtgtatgtct  17717400                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                           --------->ARR11(3)                       <------MYB46(1)                                     ==========================                       <------MYB83                  --------->AHL20(2)    --------------->AGL15                   <---------STY1(2)    <---------TOE2(3)          ----------->GT1         <---------ARR11(3)              --------->WOX13(1)   <----------DOF2--------->WOX13(1)       <---------------AGL15      --------->ICU4   ----------->GT1 <-----------GT1<---------------AtSPL8   --------->YAB1--------   atttagtcatttttagcaattagctaggttaaaacaacttttaacattttttcaattaagtacaaactgtagttaaactactaatagtatatagatatat  17717500  Previous    Next  AGI:  At2g42530.1    Description:  COR15B. similar to COR15A (COLD-REGULATED 15A) [Arabidopsis thaliana] (TAIR:AT2G42540.2); similar to cold response protein [Thellungiella salsuginea] (GB:ABX79675.1); contains domain PTHR23241 (PTHR23241) Range:  from: 17716114    to: 17717023    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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