Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->At4g35610                                                    <---------At4g35610                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                 --------->CCA1(2)                                                --------->ARR14(3)                                                <---------ARR14(3)          --------->SPL7                                        --------->ZAT2                   <---------ANAC58                                        --------->At4g35610              <---------RAP2.6(2)                                        <---------ZAT2                   <---------ANAC58                             <---------ZAT14    <---------ARR14(2)       <---------ANAC46                          <---------ANAC58      <---------ARR11(3)  <---------MYB46(3)                         <-----------------------TaNAC69(2)    <------ZmHOX2a(2)                   --       <---------At4g35610<---------ANAC46      --------->AGP1--------->ARR11(3)                <----       ----------->RAV1(2)<---------ANAC58      --------->ARR11(3)  --------->ATHB12           ------ --------REM1(1)  --------->LBD16       <---------At4g35610   <---------ARR11(3)         <---------ARR14(2) --->DOF2<-----------RAV1(1) --------->ZAT18    --------->ARR14(2) <---------ATHB12      --------->ARR14(2)   gttgtaggcacctgttgctccgagagaggcttgcactgcatgagctgcgagatctgctcatcaagatcaatggttgcgtccgtcggaatagaattcgcgc  17708300                             --------->LBD16                  <---------------AGL15                            <---------HSFB2a(2)               ====================================MADS_MADS                            --------->HSFB2a(2)               --------------->AGL15                           ------>ZmHOX2a(2)                <-----------------AG                           <---------LBD16                  ----------------->AGL1                           ==============================HOX2a_HOX2a                           =======================HOX2a_HOX2a--------------->AGL15                          ===============================HOX2a_HOX2a                              <--                          <------ZmHOX2a(2)                 <-----------------AGL1               ----                          ========================HOX2a_HOX2a<---------------AGL15<-----------------AGL3                         --------->ARR14(2)                 ----------------->AG --------->ZAT6  ----                    <---------SPL7                <------ZmHOX2a(1)           ------>ZmHOX2a(1)  <---      <---------MYB52(1) <---------ARR14(2)<------ZmHOX2a(1)<-----------------AGL3--------------->AGL15     --------->TOE2(3)--------->SPL7   <------ZmHOX2a(2)    ----------------->AGL3--------->TOE2(3) --------------------->TaNAC69(2)      ==================HOX2a_HOX2a         <---------MYB59    <---- --NtERF2           <-----------HVH21 <---------ARR14(2)    <-----------------AGL2--------->TOE1(3) >NtERF2      <---------CCA1(2)       --------->ARR11(3)    ======================================MADS_MADS   ccattttcgttaattcgtctctcgtccgatccggaaaacagatcaggaaacaggactaggtttccaaattaggggaagtcctaaccctaaattggatgga  17708400     <---------ARR14(2)     --------->ARR14(2)                                                                          ----  <---------ANAC46                                                                               ----  <---------ANAC58          <----------DOF2                                                      <---  <---------ANAC58       <---------ALFIN1                                                     <------ -------HSFB2a(1)     --------->ANAC46                                                        <------ ----->GLK1(2)      <-----------GT1                                                       =========== ----->ARR14(2)    <-----------GT1                                                        <----------DOF2 ------ARR14(2)<----------DOF2                                                   ---------->ID1*TSS<- -----GLK1(2) <---------DAG2<---------DAG2                                   <----------DOF2  <------   atctgcgtattcttcgccttttttcccccactttctctctctctctctctctctctctctctctctctctctctctcttctttgtctcttcgctttgtgt  17708500                                   <------ZmHOX2a(1)                             --------->TGA1a                             <---------ANAC46                             <---------TGA1a                             ========================================bZIP_DOF           ===============================HOX2a_HOX2a   ====================================bZIP_DOF   ---------->DOF2           <---------ANAC58 ----->ZAT18                 ========================================bZIP_DOF                       - ----->ZAT14               <---------ANAC58                                                         < ------ZAT14               <---------ANAC46               <----------DOF2                           < ---ANAC46 <------ZmHOX2a(2) <---------ANAC58          ------->TEIL                      <-----------GT1 ---ANAC58--------->ARR11(3) <------NtERF2            <---------CCA1(2)             --------->YAB1  - ======================================bZIP_DOF   <---------ANAC46      <----------DOF2--------->YAB1 --------ANAC46            <---------ANAC58     <---------MYB46(3)  <----------DOF2 --------->TOE2(3) ---ANAC58<---------ARR11(3)------>NtERF2      <---------AtMYB61 <---------ARR11(3)<---------YAB1  <-   gcagtgaaagaagatcgaattttgagaaggcgcgtgaggagagaagcgagtggtttgtatctttcgagctctttcttttgctattaccataatacccctc  17708600          <---------ZAT18          --------->ZAT18     <---------WOX13(1)  <---------AHL20(2)  <---------YAB1 -------------->AGL15 ----------DOF2     ----------->HVH21 ---------------AGL15                                             <---------At4g35610 -------->TOE2(3)  <-----------HVH21                    ------->TEIL     <---------AHL20(2) ----------------AGL3           --------->ZAT6    <-----------GT1 --------->At4g35610     <----------DOF2   tactttaattggtgcaatagccatcaccggtttaatactaacttctacggtttaactgaaccggtttcagcttatataatcgtctcgagagacttttgcc  17708700                                                                                                   <-                                                                        --------->CCA1(2)         <--                                                                     ----------->ARR10           <---                                                                  <------NtERF2                  ----                                                                 ------>NtERF2                 <-----                                                          ----------->HVH21        ----------->HVH21        --------->DAG2                                   <-----------HVH21       --------->LBD16 <---       ---------->DOF2                  *TSS <----------DOF2    <----------ID1--------->MYB52(1)-----   ttcgcttcataaagctctctctctctagtctcacagtctcgctctctcttttttatctctgtgatggcgacgagatttgataccggtgaaagtattgggt  17708800                                                                <---------DEAR3(2)                                                                <---------MYB46(3)                                                               <---------DEAR3(1)                                                              <------NtERF2                                                              --------->ATERF1(1)                                                <------ZmHOX2a(2)                                               --------->ARR11(3)                                               <---------ARR11(3)<-------GAMYB -----NtERF2                               ---------->DOF2   ------>NtERF2 -------LBD16                          --------->ANAC58     --------->DEAR3(1)                    --- ------DEAR3(1)               <---------HSFB2a(2)           --------->ATERF1(2)              <------- ----->ETT(1)            ------->TEIL  --------->ANAC58     <---------ATERF1(2)             <-------- ------HVH21     <---------LBD16--------->At4g35610        <---------RAP2.6(2)     <-------GAMYB  --- ------ANAC46   <---------LBD16 <---------At4g35610    <----------DOF2            <-----------RAV1(1) ---->ALFIN1<---------GLK1(1) --------->HSFB2a(2)------>ZmHOX2a(2)           ------>NtERF2 --------->CCA1(2)   cggggaaaacttcgatttctcgggatgaatttgcagaagactcgctaaagatcgtttctttgccgccggttgagaacgacgactctgttgaagagatgat  17708900            --------->ANAC58            --------->ANAC58        --------->ANAC58   ---------->DOF2                                                     <---------ARR14(2) ------>ANAC58                                             <---------ATHB12            <----------DOF2 --YAB1 --------->ANAC58   <----------DOF2               --------->GLK1(1)     <-----------GT1 -------------WRI1        <---------DAG2            ----------->GT1    --------->ARR14(2) ------>ANAC58 ---------->DOF2                   <------ZmHOX2a(1)     <---------GLK1(2)     --------   aagcccaaagaagcaagtaaagtcttcgccttttacttctgtttttgagaaggatggagaaatcatccattcggattctattgacatttctttctccgaa  17709000                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  ---                                  --------->ZAT18                                                 <--                               <---------ANAC58                                                   <--                               <---------ANAC46                                                   ---                            --------->ALFIN1                                                      ---                         ------->TEIL ------>ZmHOX2a(1)                        --------->GLK1(2)  ---                      <---------YAB1 <---------LBD16                        --------->ANAC46  -------                   <---------ANAC46 <---------ANAC46         <-----------------AGL3           <------                  <------NtERF2<---------ANAC58            ------->TEIL    --------->LBD16    <------ ->ANAC46       --------->ALFIN1  <---------ZAT14      --------------->AtSPL8 <---------GLK1(2)  <---   acgactcttgaagaaaccgtggcgatgaatgtggagtgtcctggagtagtagtagtctctgtacctgaaaatggttccacgattcttgaagagaataagg  17709100 ---------------------WRI1 --------MYB46(3) -----MYB46(1) -----MYB83 -------AtMYB61 ------>MYB111(2) -------MYB46(3) -------DEAR3(1) ------>MYB46(2)                                                              --------->ARR11(3) ------>MYB111(1)                                                            <------ZmHOX2a(1) ------>MYB55(2)           --------->GLK1(1)                             ---------->DOF2 -->DAG2       ---------->DOF2                                          --------->CCA1(2) ---TOE2(3)   <------ZmHOX2a(1)                                 --------->At4g35610                 - ---TOE1(3) <---------TOE2(3)                 <------ZmHOX2a(2) --------->ZAT18                    <- -----P     <---------TOE1(3)           --------->DAG2  <---------At4g35610<---------TOE2(3)---------   ttggtgaagagattaaggaaagctctgagatttctactacagaaggcgatcgacttggagatgatgtgctcaagataaaggatgttgttgagactgatgg  17709200  Previous    Next  AGI:  At2g42500.1    Description:  PP2A-4 (protein phosphatase 2A-4); protein serine/threonine phosphatase. Identical to Serine/threonine-protein phosphatase PP2A-4 catalytic subunit (PP2A4) [Arabidopsis Thaliana] (GB:Q07100;GB:Q7G9R3;GB:Q9ZRF6); similar to PP2A-3 (PROTEIN PHOSPHATASE 2A-3), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT3G58500.1); similar to Serine/threonine-protein phosphatase PP2A catalytic subunit (GB:Q06009); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186) Range:  from: 17704745    to: 17708495    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g42510.1    Description:  spliceosome protein-related. similar to spliceosome protein-related [Arabidopsis thaliana] (TAIR:AT1G54380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67777.1); contains InterPro domain Survival motor neuron interacting protein 1; (InterPro:IPR007022) Range:  from: 17708740    to: 17711696    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version