Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------ANAC58                                                                    <----       <------MYB83                                  <------------MYB.PH3(1)                 <-------       <------MYB46(1)                ----------->HVH21 <---------ARR14(2)                 <---------At4g35610      <---------TOE1(2)             ------->TEIL   --------->MYB52(1)                      --------->At4g35610 ----------RAV1(1)            --------->ARR14(2)<------NtERF2---------->DOF2               <------NtERF2 --------MYB46(3)         <---------LBD16      <---------MYB46(3)                      <-----------HVH21 -------DOF2<---------ANAC58 <------ZmHOX2a(1)<---------ANAC46       <----------DOF2  ------>ZmHOX2a(2) ---->TOE2(3)         <---------YAB1--------->ARR14(2)  --------->ARR14(2)      <---------At4g35610   tttgttggcaggtttcttggcagtattatcaggaaacgaatcgacagggcggataacggattccaaagaaactttagaggctcgctgatcgtcagcgtcg  17702500                            --------->ARR14(2)                               ===============bZIP_DOF                         <---------ANAC46                                    <---------TGA1a                        <---------At4g35610                         <---------ARR14(2)                        <---------LBD16                  <------NtERF2       --------->O2                      --------->ATERF1(1)              --------->DEAR3(1)    <---------O2                     --------->At4g35610               <---------ALFIN1    ------>NtERF2  <---------At4g35610                     <---------At4g35610              --------->MYB46(3)   <---------TGA2(2)                     --------->ZAT2                   <---------ABI4(2)   --------->DEAR3(1)                <---------LBD16            <------NtERF2------>NtERF2    --------->DEAR3(2)              --------->ARR14(2)           <---------LBD16--------->DEAR3(1) --------->TGA1a        --------->MYB52(1)  <---------ARR14(2)<------NtERF2         --------->ARR14(2)    <---------ZAT2   ---------->DOF2   <---------ZAT2       <---------ATERF1(1)      <------ZmHOX2a(1)      --------->At4g35610 -----SPL7    <---------ARR14(2)         <---------DEAR3(1) --------->ALFIN1<------NtERF2 --------->ZAT2 ----HVH21 ------->GAMYB--------->At4g35610--------->ATERF1(1) <---------ANAC46  <----------DOF2-----   gaccatacagcaacggtatcgggagcagcggagacgagtttgggaggcggaagagagccaccgtggtgaggacatgccgacgtctttttcgaagctgagg  17702600                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                      <---------MYB52(1)                                                                                     <-----------HVH21                                                                                    --------->ANAC46                                                               ---------->DOF2   <---------ARR14(2)                                                               <-------TEIL      --------->ARR14(2)                                --------->AtMYB61        ----------->HVH21   --------->ZAT6    ------                          --------->ARR14(2)           --------->At4g35610   --------->YAB1  <-------                  --------->ARR11(3)               --------->ANAC58         <---------ATHB12 --------                  <---------ARR11(3)               --------->ANAC46        ------>MYB83  <---------ANAC58 ->NtERF2  <-------TEIL   <---------ARR14(2)       --------->ANAC58        ------>MYB46(1)<----------DOF2   ccattgaatagggttcacaagttctccaaatccaccaaaatcagtttcaacacaatccactgacatacagcaaaacctatcactatccgtcgcttgatct  17702700                                                              --------->YAB1                                                              <---------ICU4                                                             <---------ATHB12                                                             --------->ICU4                                                           <---------At4g35610                                                       ------>ZmHOX2a(2)                                                      <---------GLK1(1)                                                      --------->GLK1(1)                                                     --------->ARR14(2)                                               <---------GLK1(2)                                               <---------ARR14(2)                                               --------->ARR14(2)                     --------->At4g35610      <---------HSFB2a(1)                <---------HSFB2a(2)           <---------HSFC1(2)--------->bZIP60(1)             <----          --------------->AGL15               --------->HSFB2a(1)                               -----          <---------ALFIN1      >>>>>>>>>TBF1 --------->HSFC1(2)<---------bZIP60(1)   ---------------          =========================================================================================== >ZmHOX2a(2)    --------->HSFC1(1)       >>>>>>>>>TBF1<------ZmHOX2a(2)               <-------------- --ARR11(3)     <---------HSFC1(1)    >>>>>>>>>TBF1  <---------ARR14(2)          <---------At4g35610 ->ARR11(3)     --------->HSFB2a(2)>>>>>>>>>TBF1--------->GLK1(2)                <---------ZAT2 <----   tcccccttctctccacttctagaagctccaagaagaagaagaagaagaagattccgatctccgatgatgacacaaaaatccacagctactactactagta  17702800                                                     <------ZmHOX2a(2)                                                    <---------ARR11(1)                                                    <---------ARR11(3)                                                    --------->ARR14(3)                                                    --------->ARR11(3)                                                    <---------AGP1                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                    <---------ARR14(3)                                                    <-----------ARR10                                                   <---------CCA1(2)                                                   <---------ARR14(1)                                                  --------->LBD16                         <-----------HVH21      <---------At4g35610                        --------->bZIP60(2)     <---------LBD16 -----ZAT18             --------->ANAC46    <-----------HVH21 ---->ZAT14         <---------ZAT2          <-----------TGA1 >AGL15             --------->ZAT2        <-------TEIL------>ZmHOX2a(2) =MADS_MADS         --------->At4g35610 <---------GLK1(2)              ------>ZmHOX2a(2) -AGL15             <---------At4g35610 <---------ARR14(2)        --------->LBD16 -----ZAT14         <---------GLK1(1)   --------->ARR14(2)      <---------LBD16                  ----   cagtcttctctctctcgacttgagctccgtcacaagaagttggattcgtcaccggatcttgagttctccgtgatcgtataatcgctcttcaatttgtttg  17702900                                                                                           <---------AHL20(2)                                                                                    ------->TEIL                                                                        <---------DAG2     --------->AHL20(2)                                              ---------->DOF2           <----------DOF2  <-----------TBP                                           ------>NtERF2    --------->ZAT18      --------->ANAC58                                          --------->RAP2.6(2) <---------PCF2     --------->ANAC58<---                                 --------->AtLEC2           <---------RAP2.3(3) --------------->AtSPL8                                 --------->ANAC46        <-----------RAV1(1)    <---------------AtSPL8    ---------->DOF2            *TSS--------->YAB1  --------->TOE2(3) ------>ZmHOX2a(1)<---------MYB59 ------>ID1        <-----------RAV1(1)  --------->At4g35610 <---------ZAT18  <-----------GT1   <-----   tttttttaaagagtttgatttttgttggagagtccaagcagaagcggccaaagccttatttgtgggctctcctactttttaacaagtacctatttatatt  17703000                                                          --------->ZAT18                        --------->HSFB2a(2)          --------->ALFIN1               --------->AHL20(2)                  --------->TGA1a               --------->ATHB12                    --------->O2               <---------AHL20(2)                  <---------ANAC46               <---------ICU4                      <---------O2        --------->ARR11(3) ==================================bZIP_DOF        <---------ARR11(3) ---------->DOF2    <---------DOF5.7(2)    ---------->DOF2     <---------HSFB2a(2)   --------->MYB52(1)                            <-------- ------AHL20(2)--------->ATHB51 --------->GLK1(1)  <---------bZIP60(2)                     --------->AHL20(2) ----AHL20(2) --------->ICU4    <---------GLK1(1)  <---------TGA1a                   ----------->GT1   tttttttaaaggtctaattatttgttttagaaagaaatccaacttggataacgacgtggatgcactattgttcatgagtttctcaatttgtaatttacta  17703100                                                                      --------->AHL20(1)                                                                      <---------AHL20(1)             <---------AHL20(2)                                      --------->AHL20(2)             -        --------->AHL20(1)                                       --------------->AGL15             --      --------->AHL20(1)                                   <---------------AtSPL8      --------->AHL20(2)      <---------AHL20(1)                  <-----------GT1  --------------->AtSPL8      <---------AHL20(2)     --------->AHL20(2)             --------->YAB1    --------->AHL20(2)              --------->AHL20(2) ---GT1 <---------AHL20(1)   <---------ZAT6           <---------AHL20(2)        ----------->GT1    --   tttggaaatatatattatatgtgtctaattagagtcaaacatattttccatttgaattttttaagtactaaatatataaaactggaaattaaaatatagg  17703200     <---------AHL20(1)     --------->AHL20(1)                      ----------->GT1     --------->ARR11(3)                    ---------->DOF2                                       ---- <------ZmHOX2a(1)                      ----------->GT1  --------->ATHB12                       ----- ---------->GT1            <------ZmHOX2a(1)--------->DAG2        ----------->GT1               <---- ------->ANAC58--------->ARR11(3)      <---------TOE2(3)<---------YAB1            ----------->HVH21 ------->ANAC58<---------ARR11(3)    ---------->DOF2  <------ZmHOX2a(1)       <---------YAB1    <----   taaggaaaatattggaagttcttatctaaggagttttaacaaaggtaaagtatataggatgatggaaatagaaaaatatgacaattgacagactacataa  17703300                                                --------->AHL20(2)                                     <---------AHL20(2)                                     --------->AHL20(2)                                             -                                     --------->AHL20(1)                                           <--                     --------->AHL20(1)         <---------AHL20(2)                                <--                     --------->AHL20(2)         --------->ICU4                                    ---                     <---------AHL20(1)    ----------->GT1                                        <--           <---------ARR14(2)       --------->AHL20(2)                                            <--       <-----------GT1<---------AHL20(2)   <----------ID1                                         <-- ------->GT1         <---------AHL20(2)   ----------->GT1                                         --- ---->DAG2 --------->ARR14(2)       <---------AHL20(2)                                            <-- -----TOE1(3)  --------->LBD16   --------->AHL20(2)           --------->AHL20(2)               ------ -----TOE2(3) --------->ANAC46  --------->AHL20(2)   <-----------GT1              ----------->GT1 <--   ggttatatgtcactatccgaaaatttatttcaaaataaaaaaattgggaaaaaattaaccaaaaaaaaatgaaacatatatgttttgttaaataagtttg  17703400  Previous    Next  AGI:  At2g42490.1    Description:  copper amine oxidase, putative. similar to copper amine oxidase, putative [Arabidopsis thaliana] (TAIR:AT3G43670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16112.1); similar to peroxisomal copper-containing amine oxidase [Glycine max] (GB:AAD40979.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62304.1); contains InterPro domain Copper amine oxidase, N3-terminal; (InterPro:IPR015802); contains InterPro domain Copper amine oxidase, C-terminal; (InterPro:IPR015798); contains InterPro domain Copper amine oxidase, N2/N3-terminal; (InterPro:IPR015801); contains InterPro domain Copper amine oxidase, N-terminal region Range:  from: 17698485    to: 17702931    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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