Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                              <------                                                                                             --------                                                                                             --------         --------->MYB52(2)                                                                  --------         <---------MYB46(3)                                                                 <--------   ------>MYB83              <---------WOX13(1)                                             ---------   ------>MYB46(1)         --------->ATHB12                                                 <-------- ---------GT1   --------->ZAT2                                                      <------ZmHOX2a(1) ---AHL20(2)    <---------At4g35610        <---------YAB1                  <---------CCA1(2)--------- ->GT1  <-------TEIL   ------>NtERF2       <---------ATHB12     <----------DOF2    --------->ICU4   -   ttaccaaatgttcgttcgagctctctgcctgattgattcaacacaatgaatgaatacttggttctcctttcccatccatatcgtaaggattcaagattcg  17691900        <-----------HVH21 -------->ANAC58 -TEIL XXXXXXXXXXXXXXXXXXX>MIR3434* ->GLK1(2) ->ARR14(1) ->CCA1(2)                                        --------->TOE1(2) -ARR14(2)              ------>ZmHOX2a(2)         --------->TOE2(2) >ARR14(2)            <---------ARR11(3)         ----------->RAV1(2)            --------->TOE1(3) -GLK1(2)             --------->ARR11(3)--------->TOE1(3)     --------->AHL20(2)--------->TOE2(3) >ARR11(1) <---------At5g28300          --------->TOE2(3)----------->GT1     <-----------GT1 -------->ANAC58  --------->O2       <---------ALFIN1  ---------->DOF2 --------->ICU4   gaacgctcagagtcacagccaagtgatcttcaatttgccaaaccctaataaacctgagaaagaaaaaaatacaaagattaaaccctaaacatacaaacta  17692000                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                 ----                <---------HSFC1(1)                                                               ----                --------->HSFB2a(2)                                                             -----                --------->HSFC1(1)                                                              -----            ------>ZmHOX2a(2)                                                                  ------          <---------ARR11(3)              --------->ZAT18                                    --------          --------->ARR11(3)              <---------ZAT18    ---------->DOF2       <-----------GT1---    <-------TEIL<---------HSFB2a(2)  <---------ZAT14   ---------->DOF2     <---------At4g35610<------   --------->CCA1(2)              <---------ANAC46   <---------TOE2(3)<---------GLK1(2)      <-------   ataagatacatcgatcttcgagaacaagtttttgttgagtctagtgaacgagtttaagaaagctaaagaactgattctgctcgttttaccattcgcatcc  17692100        ------->TEIL     <---------YAB1 ---------At4g35610                                                                    <---------ARR11(3) ----->NtERF2                                                                          --------->ARR11(3) ------->RAP2.3(2)                                                                     <-----------ARR10 ------->DEAR3(1)                 --------->HSFB2a(2)                                  --------->ARR14(2) -->NtERF2               --------->At4g35610                                           <---------ARR14(2) ----->LBD16             --------->GLK1(1)                                             <---------ARR11(1) ---->ANAC46             <---------At4g35610                                          <---------CCA1(2) -->GAMYB                <---------GLK1(1)                                       <-----------GT1 --->MYB46(3)     <---------GLK1(1)                                           <---------GLK1(2) ->ARR14(2)       --------->GLK1(1)                                         <---------YAB1 ------>RAP2.3(1)--------->ARR11(3)                                    --------->At4g35610 ---ATERF1(1)    <---------ARR11(3)                --------->TOE2(3)   <---------At4g35610 --ARR14(2)   <------ZmHOX2a(1)   <---------HSFB2a(2)    ----------->GT1    --------->ICU4      -----   gccgcttatgaatataggagatatcgcatctcccttctccaagaagttatctatctcaaacgtgaaactcgtctgctcatgattctccatatctcttccg  17692200                                      --------->ANAC46                                      --------->ANAC58                                      <---------TGA1a                                      --------->ANAC55(1)                                    <---------ALFIN1                              --------->GLK1(2)                     --------------------->WRI1                     <---------ANAC58 --------->O2                     <---------ANAC58 <---------O2                     <---------ANAC46 --------->ANAC58             <----------DOF2 <---------GLK1(2)    <---------ICU4     --------->AHL20(2)           ---   <----------DOF2  --------->MYB52(2)--------->TGA1a<---------AHL20(2)                       -------   =============================================bZIP_DOF       --------->YAB1              <---------CCA1(2) ---->LBD16  ===================================bZIP_DOF      ----------->GT1         <-----------GT1   agacgctttcttaggcttttgttacttggaagaatctcacacgtctgtttaatatttatagacattgaaaataaaacaaaactttttaaaaccctatctc  17692300                                                             <-----------GT1                                                        <---------AHL20(1)                                                        <---------AHL20(2)                                                        --------->AHL20(1)                                                        --------->AHL20(2)                                                     <--------ATHB1                                                     <--------HAHB4                                                     --------->YAB1                ----------->GT1                      --------->ATHB51            --------->DAG2                          --------->ICU4         <------ZmHOX2a(1)                          <---------ATHB12        <----------ID1     <---------AHL20(1)       <---------ATHB51        ------>ZmHOX2a(1)       <---------TOE2(3) <---------TOE2(3)      ------------>CBF     --------->AHL20(1)   --------->CCA1(2)   <---------AHL20(2)      --------->ANAC58      <---------AHL20(1)  <---------ARR11(3)   --------->AHL20(2)      --------->ANAC58      --------->AHL20(2)  --------->ARR11(3)  --------->AHL20(2)     <---------At4g35610  ------>MYB83 ------->DOF2 --------->At4g35610     ---------->DOF2<---------ICU4 --------->YAB1  <----------DOF2 -->TOE2(3)---------->DOF2 --------->AHL20(1)--------->At4g35610  ------>MYB46(1) ------>ZmHOX2a(1)   aaaagatataaggaaaagctgaaaattaatatttttaaaacaaagtcagaagcaataattaattaaccaaatataatcctattcctctttataactaagt  17692400                                             --------->YAB1                                            <---------YAB1                 <---------ICU4                                        <-------GAMYB                      <---------AHL20(2)                                       <---------MYB46(3)                  <---------AHL20(1)                                       --------->MYB52(2)                  --------->AHL20(2)                                     <--------P--------->ICU4              --------->YAB1                                     <---------MYB52(1)                   <---------ATHB12     ------                                    <-------GAMYB  -------->HAHB4         --------->ICU4    ---------                                   <---------MYB46(3)   ------->TEIL      <---------ATHB51--------->CCA1(2)                                <---------ANAC46  <---------YAB1        --------->YAB1   <---------ARR14(2)                       ---------->DOF2 --------->MYB111(1)   ---------->ID1<--------ATHB1--------->ARR14(2)                   --------->YAB1  ----------->GT1--------->ICU4 <---------ICU4--------->AHL20(2)       <---------AHL20(2)       <---------ANAC58<---------ICU4  --------->ICU4--------->YAB1<--------  ------->TEIL  <----------DOF2 <---------ANAC58--------->YAB1 ------------>CBF<---------AHL20(2) ---   catgaacattttttttttctttcataaaagtcttgtgtggttagttgtgataatgatgcatttgtcacaattactaataattttaatgacagatatgtat  17692500                                                     --------->AHL20(2)                                                    --------->AHL20(2)                                               <------ZmHOX2a(2)               <---------AHL20(2)         <-------TEIL                          ------------>CBF<---------AHL20(1) ->TEIL --------->CCA1(2)                     <---------ARR11(3)               --------->AHL20(1) >ANAC55(2)                                   --------->ARR11(3)               --------->AHL20(2) -ANAC55(2)                               ---------->DOF2      --------->ARR11(3)           --------- --------->CBF --------->TOE2(3)  <---------ANAC55(2)<---------AHL20(2)       --------->AHL20(2)   ttcaatttagatacatatgttaatttcatctctaatacataaacaaaagatcaatttaaatgttatatattcttcatcaaattaattagataaataaaga  17692600            ----------->GT1           <---------TOE2(3)          <---------ICU4                                ------>ZmHOX2a(1)          --------->YAB1                                <---------------AGL15         <---------ATHB51 --------->TOE2(3)             --------------->AGL15                  <-----      <---------YAB1 --------->AHL20(2)    <---------CCA1(2)                        ----------->GT1 ----------->GT1 <---------YAB1          <---------ANAC58             <-----------GT1    <---------ARR14(2) ->DOF2--------->YAB1<---------AHL20(2)  <---------ANAC58  <----------DOF2        ----------->GT1   aaccagttacaataatgttatatttaaatctaaatggatgagttcgtatcgctgcatccttctttgagaaattatccatctcaaacgtgaaaatatggta  17692700                                               --------->LBD16                          <-----------RAV1(1) <---------HSFB2a(2)                         <---------TOE1(3)    --------->HSFB2a(2)                     <-------GAMYB--------->ANAC58     <---------ANAC46                <-----------RAV1(1)        --------->ARR11(3)                                       -                <---------MYB46(3)----------->GT1   ----------->HVH21                             ---     --------->YAB1 <------MYB46(1)       --------->CCA1(1)                                       ---    ----------->GT1 <---------MYB46(3)--------->AHL20(2)                          --------->YAB1 ----   <---------TOE2(3)<------MYB83  --------->ANAC58  ----------->TGA1    <----------DOF2        ------ ---P<------ZmHOX2a(1)   <---------TOE2(3)--------->RVE1(1)          <---------ARR11(3)  --------->YAB1   agtgtaaggataaacgatttgttggttaatgttggaacgaaaaaatatccagaaatgacgcagataaactaggtcttttgactattagaattcataaacc  17692800  Previous    Next  AGI:  At2g42470.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42460.1); similar to MATH domain containing protein [Brassica oleracea] (GB:ABD65138.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 17686965    to: 17692265    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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