Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ARR14(2)      --------->ARR11(3)      --------->ARR14(2)      <---------ARR11(3)      <---------ARR11(1)      <-----------ARR10     --------->YAB1     <---------CCA1(2)     <<<<<<<<<ARR2               <---------DAG2 -------->ANAC58           <---------ATHB12        <-----------GT1        --------->AHL20(2) -------->ANAC46     --------->ANAC58              ---------->ID1         <---------AHL20(2) -------->ANAC58     --------->ANAC58          <---------DAG2         <---------RVE1(1) ------->DOF2    --------->AtLEC2              <----------DOF2       --------->ARR11(3) ------ATHB12    --------->ANAC58           <---------TOE1(3)  --------->WOX13(1) ->MYB83         --------->ANAC58  --------->AHL20(2)  <----------DOF2<---------CCA1(1) ->MYB46(1)    <---------AtLEC2    <---------AHL20(2) <---------DAG2 <---------ARR11(3) ---MYB59<----------DOF2 --------->WOX13(1)<-----------GT1   <---------YAB1                      <---   acaagccatatctttctgcatgcaagacaatcaaaatataaattttaagctttttcccttttcatcaatgagatatttatatagtttctgcctcttaaga  17685900                                                      <---------WOX13(1)                             <---------ARR11(3)  <---------ANAC58                                 <--                       <-----------GT1           ----------------->AGL1                  <----------DOF2                  --------->CCA1(2)              <---------ANAC58                       <---------DAG2                 <---------ARR11(3)              <---------AtLEC2                    --------->ANAC58                 --------->ARR11(3)          <----------DOF2                         --------->ANAC58             --------->CCA1(2)          ------->TEIL--------->ATHB12               <---------ANAC58 ------GLK1(1) ----------->ARR10    --------------->AtSPL8                         <---------ANAC58   attcagacttggaagataagatatgttaccagatgttctatggacctctttgcctgattgattcaatacaatgaagtgcaaactggctcgccttttccat  17686000                                                       --------->ANAC46               <---------TOE2(3)                       --------->ANAC58         --------->ATHB12                  --------->ANAC58 <---------At4g35610                 -----         <--------ATHB1                    --------->ANAC58 --------->At4g35610       <---------At4g35610        --------->ICU4            <-------TEIL         --------->ANAC58               --------->ZAT2        <---------ATHB12 --------->ANAC58  <---------ANAC55(2)                        <---------ZAT2  <--------P   <---------TOE1(3) --------->CCA1(2)   ---------->DOF2                  --------->At4g35610 ---------RAV1(2)        --------->ANAC58  --------->ANAC55(2)               --------->YAB1   -------   ccaggttgcaatgatttagggttcccaacgcatagatacagagataagtaatcttcaaagccatctcccttgggacgaattagaacatagctgagagaaa  17686100                                                                                               <-----                                    <-------TEIL                                               ------                                 --------->ANAC55(2)                                          <------                                 <---------ANAC55(2)                                         --------                                --------------->AtSPL8                                     <---------LBD16                                --------------->AtSPL3                                   <---------ARR14(2)                                <-------TEIL                                            ------>ZmHOX2a(1)                              --------->ARR14(2)                                      ------>ZmHOX2a(2)                              <---------ARR14(2)                                    --------->ARR11(3)        ---------->DOF2       --------->ARR11(1)     <-----------ARR10              <---------ARR11(3) ------>GT1        <---------------AGL15             --------->GLK1(2)            <---------YAB1 --->DOF2       <-----------GT1--------->CCA1(2)    <---------GLK1(2)     ---------->DOF2--------->ARR14(2)   gaaaaacaaaaaaagattaaaccctatttagagatacgtacaagtttatttgcagaatctagacaattgagtttaaaaaagcttatgatcctatccggtt  17686200                          ------>NtERF2                         --------->DEAR3(1)                         <---------ALFIN1                        --------->ATERF1(1)                        <---------ABI4(2)                           --------->LBD16                        <---------MYB55(2)                         <---------ANAC46                       ------>NtERF2 <---------ZAT14               --------->HSFB2a(2)                       <---------ATERF1(1)                  <-----------GT1                       --------->At4g35610                --------->HSFC1(2)                        <      <---------AHL20(2)--------->MYB46(3)                --------->HSFB2a(1)           --------->LBD16 ----ARR14(2)          <---------At4g35610                <---------HSFC1(2)    <---------CCA1(2)   - --->ARR14(2)         --------->ANAC46                    <---------HSFB2a(1)<-----------GT1 -------- ---MYB52(1)          --------->DEAR3(1)          --------->ATHB12 <---------HSFB2a(2) <-----------RAV1(2) ->LBD16    <-----------GT1<------NtERF2      <-----------------AG<---------LBD16      --------->HSFB2a(2)   cttctaagttaattttaccattcgcagccaccgcttgagaacacagtagacgttattggaaatttccttccggagaaattttctatcttccaggtaaaag  17686300       <---------ARR11(1)       <---------ARR14(2)                                                                    <-------       --------->GLK1(2)                                                                     <-------       <-----------ARR10                      <---------TOE2(3)                             <--------      <---------CCA1(2)             --------->ANAC55(2)    ----------------->AGL1           <--------  <---------HSFB2a(2)               <---------ANAC58<------MYB46(1)                     <---------ANAC58  --------->HSFB2a(2)               <---------ANAC58<------MYB83                        <---------ANAC58 ---------At4g35610                 --------->YAB1 <---------AtMYB61                <------MYB83 -------->At4g35610  --------->At4g35610      <---------TOE1(3)--------->ALFIN1     <------MYB46(1) -->DOF2           <---------ICU4<----------DOF2   --------->MYB59 <----------ID1  --------->MYB59 --   tcttctgcaaatctatctccatcatctcaagaacgctttcgtaattttagggtttggttcttccagtgagggacaagagacttgtttggttcttgcttta  17686400                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                 ----           ---------->DOF2                                                                   --------        --------->ANAC58                                                                     <-------        --------->ANAC46                                            <---------YAB1 <---------ARR11(3) ---DOF2--------->ANAC55(1)                                        --------->AHL20(2)       --------- --DAG2<---------LBD16 <----------DOF2                             <---------AHL20(2)       <-------- -ANAC58<---------ANAC55(2) <---------ICU4     <---------MYB52(1) --------->YAB1   --------->ARR11(3) -ANAC58--------->ANAC58   <---------YAB1      <<<<<<<<<MYB98  ------>ZmHOX2a(1)   --------->GLK1(2) ------->ANAC46  ---------->DOF2  <----------DOF2       ----------->TBP   ----------->GT1 <---------ANAC46   taagtcagacacggaaagaaaaagactttataattccttttttttttttgttaggcttataaatcctattttaatagggaaacaaaatctaggggtgtag  17686500  ------->GAMYB -------WRKY45 -------WRKY12 -------WRKY38(1)          <---------AHL20(2)                                        --------->LBD16 ----->WRKY18(1)          <---------YAB1                    --------->ANAC58   --------->ARR11(3) ->ZAT14        --------->ATHB12                <---------YAB1---------->DOF2  <-----------ARR10 --ZAT14   --------->AHL20(2)                   ------------>CBF         --------->ANAC58--------->ARR14(2) >ALFIN1   <---------AHL20(2)             <---------YAB1    --------->ANAC58   <---------ARR11(3)   < -REM1(1) <---------AHL20(2)        <-----------TBP <---------ATHB12     --------->ANAC58<---------ARR14(2)   tcaaccctatattttaaatgatttgatttttaatgtgtttttatatgattttcaatgaattcaagaaagttaaccaagaaaaatctccccaaatcccact  17686600                                               --------->ARR11(3)                                               <---------ARR11(3)                                              <---------CCA1(2)                                           >>>>>>>>>RAP2.2                <---------RVE1(1)        <---------ARR11(3)                <---------CCA1(1)        --------->ARR11(3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               --------->ARR11(3)       --------->CCA1(1)      --------->YAB1              <<<<<<<<<RAP2.2           --------->RVE1(1)     --------->AHL20(2)                   <- -----------GT1<---------ARR11(3)   --------->AHL20(2)---------->DOF2--------->YAB1 <<<<<<<<<<<<<<<<<LFY   taaaaccatgtgatttagatatttgtatttttaactaagaaaatatctaaatctttaaaagtcattaaaaatgaaaatgtcttaaataacattggatttt  17686700                           --------->AHL20(1)                          --------->AHL20(2)                          --------->YAB1                       --------->YAB1                      <---------AHL20(2)                      --------->AHL20(2)                     --------->AHL20(1)                     <---------AHL20(1)             <------ZmHOX2a(2)             --------->ZAT14                                    <---------YAB1        --------->YAB1            <---------ARR11(3)                                --------->CCA1(2)      <---------YAB1           <---------At4g35610                          --------->AHL20(1)         --------->YAB1         --------->HSFB2a(2)      --------->ARR11(3)   --------->AHL20(2)       ----------->GT1         <---------HSFB2a(2)      <---------ARR11(3) --------->AHL20(2)     --------->ATHB12      <--      <-----------GT1--------->AHL20(2)            --------->AHL20(2)      <---------YAB1        <--- --------TOE2(3)     <---------AHL20(2)            <---------AHL20(2)   --------->TOE2(2)  --------->ZAT6   taagtttttttccagatcactaatttaataatattagatattagaagacttaaaaaaatatatgatatgaataacatatgatttgttataataacacaaa  17686800  Previous    Next  AGI:  At2g42460.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42470.1); similar to predicted protein [Ostreococcus lucimarinus CCE9901] (GB:XP_001417860.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974); contains InterPro domain TRAF-type (InterPro:IPR013322) Range:  from: 17683477    to: 17686322    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version