Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------ANAC58                                                         <---------GLK1(2)               <---------ANAC46                                                    <----------DOF2               <---------ANAC58                                            <---------ANAC58    <---------TOE2(3)                                                 <-----------RAV1(1)--------->GLK1(2) -------ARR14(2)             <---------TOE1(3)                 <---------YAB1     <---------ANAC58 ------>ARR14(2)             <---------TOE2(3)               --------->YAB1<---------ANAC58 -------ARR11(3)          --------->ICU4                    <---------ATHB12 <---------MYB46(3) <---- ------>ARR14(3)     ----------->GT1                        --------->ICU4 <---------ANAC46     ----- -------ARR14(3)     --------->YAB1              --------->GLK1(2)<----------DOF2 <---------ANAC58 ------>ARR11(3) <---------YAB1             ----------->GT1<---------RAP2.6(3) ---------->ID1   <----   gatattgaggcttagtgtcttgatagtaattagggttttctatggagggagaatcaatagccatcatgctttgtgttgcttgttgctttagaatctctag  17676400                                                                 <---------YAB1                                                              <---------ATHB51                                                        <-----------GT1                               --------->AtMYB61     --------->ARR14(2)                          <-----------GT1         <---------ANAC55(1)                <-----------GT1                    ------>MYB83                  <---------ANAC55(2)           <---------ARR11(3)    ----------->GT1 ------>MYB46(1)               --------->ANAC55(2)           --------->ARR11(3) -----At4g35610   --------->TOE1(2)--------->ANAC58  <---------ARR14(2)        --------->YAB1     <-- ---->ZAT2        --------->TOE2(2)--------->ANAC58--------->LBD16            <---------YAB1      --- -----ZAT2  <-----------GT1 --------->ZAT6       ------>ZmHOX2a(2)        --------->YAB1         <---   ctgtgtttgtaaattcacaacctacgaataacaccacaagaaaattagtgatccgtatttacaaattatgcatatatcatatgatattcacattttgtca  17676500                                                                               ------>NtERF2                                                  <---------MYB46(3)       --------->ANAC58                                                  <-----------RAV1(1)      --------->ANAC46                                             <---------ANAC58              --------->ANAC58         <                                           <---------AHL20(2)     --------->CCA1(2)                --                                           <-----------GT1       --------->ARR11(3)                <-                            <------ZmHOX2a(1)<---------ANAC58    --------->ARR11(1)               <-- -------ARR14(2)<---------ZAT6         <---------AHL20(2)        <---------ARR11(3)               <-- ------>ARR14(2)----------->GT1       <---------AHL20(1)       ----------->ARR10               ------ ------CCA1(2) <---------TOE2(3)      --------->AHL20(1)     ---------->DOF2  --------->RAP2.3(3)----   tatccaaaatcaagactagggttaaatagaggaagttttatatatttacttgttgttggagggaaaagatatgagaaacgcagccatagatggggtcttg  17676600                                                 ------>ZmHOX2a(1)                                              <------ZmHOX2a(2)                                             --------->ARR14(2)                                             <---------ARR14(2)                                           ----------->ARR10          <---------At4g35610           --------->TGA1a          --------->At4g35610           <---------TGA1a    <---------ZAT2                      --------->ANAC46    --------->ZAT2                      --------->O2 ------NtERF2                           <---------O2 ---->NtERF2  --------->YAB1          <---------ALFIN1 --------RAP2.3(1)                  <-----------HVH21 -------DEAR3(1)                    ==============bZIP_DOF                             <---------ATERF1(1) -------RAP2.3(3)      <XXXXXXXXXXXXXXXXXXXXMIR167A/B                                  ------>NtERF2 ----->HVH21 <-------TEIL           <----------DOF2        <---------At4g35610       <---------ANAC58 ----->RAP2.6(3)<---------YAB1  <---------RAP2.6(2)        --------->At4g35610       <---------ANAC58   acggcgagcttgagcttcataatagattgtagtagcggcttcacgtcgatcctccatgggaagatgagagagcaatttagaagcattgctggctccaaac  17676700                                  <---------AtLEC2                        --------->HSFB2a(1)                        --------->At4g35610                        <---------HSFB2a(1)                        --------->HSFC1(2)                              --------->ANAC46       ------                        <---------HSFC1(2)                       ------>ZmHOX2a(1)             ------                        <---------At4g35610                      <----------DOF2               ------                        <---------ZAT2         --------->ALFIN1 --------------------->WRI1    *TSS ----------->GT1       ----------->ARR10 ---------->DOF2  --------->ANAC46     ------>ZmHOX2a(1)   acttggtgaattgctgcaaaatgggaagctccttgttcatggcaaaagtatggggcaaacacacatccttttacacatctccttcttaaaaacttacaag  17676800                                                                          --------->TOE2(3)                                                                          --------->TOE1(3)                                                                   --------->ATHB12                                       --------->ANAC55(2)        <---------YAB1                                 <---------YAB1                   --------->ICU4                              --------->ICU4                    --------->YAB1                              <---------YAB1                 <----------DOF2 --->ANAC58             --------->ICU4 <---------ANAC55(2)--------->ARR11(3)                     <--- --->ANAC46           --------->YAB1   <---------ANAC55(1)<---------ARR11(3)        <----------DOF2 --->ANAC58          <---------ATHB12  <---------ANAC46 --------->MYB59<-----------GT1  <---------TOE2(3)   ctccacaaggagagccagagccagtcatggtgatgactattatgtgttactaagtatttaggtctttgatgattaaccttgagtagctttaagaatggag  17676900                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)              <                                                                   --------->AHL20(2)            ----                             <---------REM1(1)     --------->ARR14(2)                        <-------                            --------->ARR11(3)     <---------ARR14(2)   <-----------GT1      <-------                    <---------YAB1         <------MYB46(1)      --------->AHL20(2)           <-------                   --------->AHL20(2)      <------MYB83       --------->TOE2(3)            --------->ZAT18     --------->At4g35610---------->DOF2  --------->ALFIN1  <-----------GT1       ---------->ID1  <--- ---ZmHOX2a(1)   --------->ICU4    <---------REM1(1)     <----------DOF2--------->YAB1     <---------ZAT18   gagcattagcttagggggaatttttataaagatgtagatgaaggtgggtttcatatactctttacattatttaatcacaatttgtcttcttagtggccta  17677000                                                                                                <----                                                                                                <----                                                                                            <--------                             <<<<<<<<<<GT-3b                                              <---------AHL20(2)     <---------YAB1        <---------YAB1                                             <---------DAG2 <----------DOF2          <---------AHL20(1)                      ------>ZmHOX2a(2)   <----------DOF2 ---------DAG2          --------->ICU4                          --------->ARR14(2)   <---------ANAC58 ----->REM1(1)          <---------YAB1              <---------ARR11(3)         <---------YAB1-------- --ANAC58             --------->YAB1       --------->At4g35610  <---------ARR14(2)   <---------ANAC58 --ANAC58            <---------YAB1<---------AHL20(2)   <-----------GT1  <---------AHL20(2)--------->YAB1 --ANAC46  <---------YAB1<---------ICU4    <---------At4g35610  <---------AGP1 <---------AHL20(2) ------ALFIN1 <---------WOX13(1)--------->TOE2(3)   --------->ARR11(3)<------------------------ANAC81   cacctttctcattgtaattgattttcattatttttcttaaatttctgctaagaagattttacaatcgatctggattttttttttattgctttttaatgat  17677100                                             <---------WOX13(1)                                             <XXXXXXXXXXXXXXXXXXXXMIR835-5P      --------->YAB1                      <---------AHL20(2)  <---------CCA1(1)                       --------->AHL20(2)                        ----------->GT1  <---------RVE1(1)                   --------->AHL20(2)                           --------->DAG2 <---------ARR11(3)                   <---------AHL20(2)                          ---------->DOF2 --------->ARR11(3)               --------->AHL20(2)                         ----------->GT1        < -----ANAC46--------->AHL20(2)    --------->YAB1                      ------------>AtMYB77      ----- -----REM1(1)<---------AHL20(2)   <---------AHL20(2)                --------->At4g35610--------->ZAT14 -TOE2(3)--------->YAB1          <---------ATHB12        --------->ANAC58  <---------MYB52(1)   ----- ->ICU4 <---------YAB1   <-----------GT1  <---------YAB1 --------->ANAC58<---------ZAT6<---------ZAT14   gtagatatttatgataaaattggatattaactccaattatatatataattgatatatgcaagaaaaactaagctacagttagtaaaaagtaaactggcac  17677200                                            --------->ARR11(3)                                            --------->GLK1(2)                             --------->AHL20(2)                                            <---------ARR11(3)                      --------->TOE2(3)                                      <---------HSFB2a(2)                        ------->TEIL                                <---------ICU4                                 <-------TEIL--------->AHL20(2)          --------->YAB1        --------->YAB1            <---------ANAC58    --------->ANAC58         <-------TEIL          --------->AHL20(2)         <---------ANAC58    --------->ANAC58  --------->YAB1               <---------AHL20(2)     <---------GLK1(1)  ----------->HVH21<---------AHL20(2) ---------ARR11(3)           --------->TOE2(3)       <---------ARR14(2)<---------ICU4   --------->YAB1 ---->ANAC58        <-----------GT1   --------->HSFB2a(2) <---------ANAC46    --------->AtLEC2     -- ---->ANAC58 --------->YAB1--------->AHL20(2)        --------->ARR14(2)--------->YAB1------>ZmHOX2a(1)   aaaatcatacattcatcatattataccaattcattaattactggaaaatctcatggatttgcgtttaatataagcatgacatgcatcctaaaataaataa  17677300  Previous    Next  AGI:  At2g42440.1    Description:  LOB domain protein 17 / lateral organ boundaries domain protein 17 (LBD17). Identical to LOB domain-containing protein 17 (LBD17) [Arabidopsis Thaliana] (GB:Q9SLB6;GB:Q8S9M2); similar to ASL16/LBD29 (LOB DOMAIN-CONTAINING PROTEIN 29) [Arabidopsis thaliana] (TAIR:AT3G58190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70687.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 17675920    to: 17676794    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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