Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                 --------->ANAC58                                                   <                                 --------->ANAC58                                              <-----                                 ----------->GT1                                        ---------->DOF2                             --------->CCA1(2)                                 --------->TOE1(3)    <  --------->ALFIN1          <----------ID1                   ---------->DOF2   --------->TOE2(3)    < ---->DOF2          <---------YAB1   ---------->DOF2  <---------LBD16        ------->TEIL--------->DAG2   agaagaggggatgagacgagttctaatagagagacaagtaaaagaagttggaagtctctggattaaagagtatgaagtgaaccttaagaaaaaagtagag  17652500              --------->ATHB12             <---------YAB1           <---------ZAT2                                                          --------->ARR14(2)           --------->At4g35610                                            <---------ARR11(3)     <---------ANAC46                                                     --------->ARR14(2)   <---------WRKY18(1)                                                    <---------ARR14(2)  ----------->HVH21                                                      <---------CCA1(2) <----------DOF2                                                    ------->TEIL   <---------ARR11(3) <---------WOX13(1)                                                 <---------ARR11(1) ---------ANAC58                             ---------->DOF2        --------->GLK1(2) ---------AtLEC2   <---------ANAC58    <---------ARR11(3)           --------->ARR14(2)         ------ ----ZAT6  <---------At4g35610         --------->ARR11(3)           <---------ARR14(2)        ------- ---------ANAC46   <---------ANAC58  ------->TEIL                  <---------CCA1(2)--------->CCA1(2) ---------ANAC58<---------WOX13(1)<---------REM1(1)                <---------ARR14(1)       ---------   ttgcttgacgggaagctgattgggtttcaaaataagatgaagctcttgaaagaaacaatttcaagacgcgaatctatatctgcaagatttgatgcaacat  17652600                                                                           <---------MYB52(2)                                                                        --------->AHL20(2)                                                                      ----------->GT1                       <----------DOF2                              --------->YAB1          --------------->AtSPL3                                   <---------ATHB51          --------------->AtSPL8                              --------->ANAC58          <---------------AtSPL8                              --------->ANAC46          <---------------AtSPL3                              --------->ANAC58 --->TOE2(3)    <----------DOF2                    <-----------RAV1(1)<---------ANAC55(2) -->REM1(1)     <---------DAG2                    <---------YAB1   --------->ICU4       --------->ATHB12 -->RAV1(1)   <-------TEIL               --------->TOE2(3) ------>ZmHOX2a(1)    --------->TOE2(2)   caaacacttgagaaggtacttttctcttttagactcaaaactttcttaacttattgttgtcctcacacaattatgtaaataacctatggacgattgaact  17652700                                                                                            ---------                          <---------ICU4 --------->GLK1(2)       <---------ANAC58         <---------ARR14(2)                      <---------AHL20(2)<---------GLK1(2)        <---------ANAC58         --------->ARR14(2)                  ----------->GT1     <---------TOE2(3) <---------ICU4  <----------DOF2--------->HSFB2a(2)   ggaagaagagagcatgagtcttgtttaataagtccctattgagattctagtcatcaaatacttactggcttcttcttttgtaggcatttgcagaaccggc  17652800                                             <------ZmHOX2a(2)                                            <---------ARR14(2)                                            <---------ARR11(3)                                            --------->ARR11(3)                                            <---------ARR11(1)                                            --------->ARR14(2)                                           <---------CCA1(2)                                           <---------ARR14(1)                                          <---------DEAR3(2)                                      --------->TGA1a                                      --------->O2                                      ====================bZIP_DOF                                      <---------O2                                      ==========================================MYC_MYB                                      <---------TGA1a                                    --------->MYB52(1) <---------AGP1      <---------CCA1(1)                               =================bZIP_DOF   <---------ZAT14 <---------RVE1(1)                     <---------ARR11(3)<-----------HVH21   --------->ZAT14<---------ARR11(3)                <-------TEIL   ---------->DOF2 <----------DOF2            --------->ARR11(3) >DEAR3(2)     --------->CCA1(2)--------->DAG2------>ZmHOX2a(2)        <--------P      <-------------   atgagtccaagaagaagattcaagaactcaaaataaagtaacgtcggatctttagtagctctgtagttttttggtagatatttttgaaatctattttggg  17652900                                                                                             <------MYB46(1)                                                                                             --------                                                                                             <------MYB83               <------NtERF2                                                                <--------               <---------At4g35610                                                          ---------  <---------ETT(2)                   ---------->DOF2    <---------ZAT14          <---------At4g35610  --------->ETT(2)                 <------ZmHOX2a(2)    --------->ZAT14          --------->At4g35610 ----AGL2    *TSS        ------------>CBF           --------->ZAT6               <---------CCA1(2)   tttgtagacaattagccagcgaatgtagccaatagcgatcaaagcgtcttatgaacactactctcatcaactacatttcagtcatctctctggtttggtc  17653000                                    <----------DOF2                                   <---------ANAC58                              <---------ICU4                          --------->ZAT6                                          <----------DOF2                         <---------ZAT18                                          <---------DAG2 --->GT1      <-----------GT1 --------->MYB52(1)                           ---------->ID1         --- -AtMYB61  <---------ICU4--------->ZAT18 <---------ZAT6                  <-----------RAV1(1)      --- >MYB59 ----------->GT1 <<<<<<<ZML2<---------ANAC58                    <----------DOF2    <----------DOF2   aaaattcgattagtaattacagactagaacactaatggctttagtgtgaatttccattaactttggaaggcttctttgttgctacttttcttctttcacc  17653100                                                                         --------->YAB1                                                                        <---------YAB1                         --------->ATHB12                              <---------ARR11(3)                      <-----------------AGL3                          --------->RVE1(1)                      --------->YAB1                                  --------->CCA1(1)                   <---------CCA1(2)          --------->AHL20(2)  --------->AHL20(2)               <---------ANAC46               <---------AHL20(2)  <---------AHL20(2)              <------NtERF2              --------->AHL20(2)      <---------AHL20(2)             <------NtERF2               <---------AHL20(2)   <---------ICU4<--------HAHB4             ------>NtERF2              --------->AHL20(1)   <---------ATHB51            --------->RAP2.6(2)         --------->AHL20(2)   --------->ICU4 <---------ICU4            --------->DEAR3(1)       ------>MYB83            --------->AHL20(2)   --------->ATHB12           --------->ATERF1(1)       ------>MYB46(1)     --------->AHL20(2)<---------YAB1           <---------RAP2.6(2)<------MYB83   <---------AHL20(2)  --------->AHL20(2)           --------->RAP2.3(1)<------MYB46(1)--------->AHL20(2)  --------->YAB1  <---------YAB1      <-----------RAV1(1)<---------ICU4 <---------AHL20(2)   <---------AHL20(2)<-----------GT1    <---------At4g35610 <---------YAB1  <---------AHL20(1)--------->AHL20(2)--------->ATHB51 --->MYB46(1)<---------RAP2.6(3)   <---------MYB59       <---------AHL20(2)--------->ICU4 --->MYB83<---------ATERF1(1)--------------->AtSPL8  --------->AHL20(2)--------->ARR11(3)   aaattcaactgtggccgccttgtatcatcatttggtaccaaatttaatttaaaaatgaaataaataattaaaatatcattattaccattggtccaattct  17653200                                                  --------->TOE2(3)                                                --------->ICU4                                             <---------AHL20(2)                              --------                                             --------->AHL20(2)                           --------->ANAC55(2)                                   <---------ARR14(2)                                     <---------ANAC55(2)                                   --------->ARR14(2)                                   --------->YAB1                                   <---------ARR11(1)             <------ZmHOX2a(1)    <---------ATHB12                   <---------GLK1(2)   ----------->GT1    <---------------AGL15       ------>MYB46(1)               ---------->DOF2     --------->ARR11(3)     <----------DOF2             ------>MYB83           --------->At4g35610     <---------ARR11(3)     --------------->AGL15      --------->WOX13(1)     ----------------->AGL1       <---------CCA1(2) --------->AHL20(2)  XXXXXXXXXXXXXXXXXXXX>MIR837-3P   ataccataccatttgctgaaagaaactcaaaaccccaaatcttgaaaataaatattaattcttttttaggagaaataaacaaaaaaccaatcatgtaacg  17653300                               ------->MYC3                              ----------->GT1                              --------->TGA1a                              =============================bZIP_DOF                              --------->ANAC55(2)                              <---------ANAC55(2)                              --------->O2                              <---------TGA1a                              <---------ANAC46                        <---------CCA1(2)                              <---------O2                          <<<<<<<<CAMTA3                          <-----------HVH21                       --------->ANAC58                  --------->ANAC58                                --------->ANAC46                  --------->ANAC58                                --------->ANAC58               --------->WRKY18(1)      --------->TOE1(3)       <---------ALFIN1          --------->PCF5 --------->ANAC46                    <---------ZAT18       <---------ZAT6  <---------ALFIN1--------->At4g35610   --------->ZAT18                     ----       <---------AtMYB61 --------->bZIP60(2)           <---------ARR11(3)   <----------DOF2    <----- ->MYB52(1)   <-----------HVH21<-------MYC3     <----------DOF2<---------REM1(2)      <----------DOF2   aagaacgtagtggtccagtcaaggaacacatcacgtgaataagcttaagcctttcaagatgtgtccacacgcgtttctcttttctcttctttcattttca  17653400  Previous    Next  AGI:  At2g42365.1    Description:  other RNA Range:  from: 17648862    to: 17652913    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g42370.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63361.1) Range:  from: 17650412    to: 17652611    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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