Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->YAB1                      <---------YAB1                    --------->YAB1               ----------->GT1           --------->AHL20(1)                                                                      --           <---------AHL20(2)                                                                      <-           <---------AHL20(1)                              --------->ZAT6                 <<<<<<<<<GATA-1           --------->AHL20(2)                            ------->TEIL                    <-----------GT1 >YAB1    <---------AHL20(2)          <---------YAB1  --------->ANAC55(2)              <---------AHL20(2) -GT1     --------->AHL20(2) <---------AHL20(2)   --------->YAB1                     ------->TEIL <--   tttgttgacaaaataaattgtattatcatattttaaaattttgatagcagtatcatatgtaactctaacattctatgtttagagatgaatttatctatat  17647500                                                    <---------MYB111(2)                                                    <---------MYB46(2)                                                    <------------MYB.PH3(2)                                                    <---------MYB59                                                  --------->MYB52(1)        <---------YAB1 ------->ARR11(3)             <---------------AGL15 <---------MYB111(1)   -------->HAHB4 --------ARR11(3)             --------------->AGL15 <---------MYB52(2)    --------->YAB1         ---- -------CCA1(2)       <-----------GT1 <---------At4g35610                --------->ICU4         -----   atatctacttggataaaccaatttgcaccatactatttgcagcatatgagactaactaactcttgatacactgaaatgatggtagacaattcagtctata  17647600                                                                      <---------YAB1                                                                  --------->ARR11(3)                                                                 <------ZmHOX2a(1)                                                            --------->ANAC55(2)                                                            <---------ANAC46                                                            <---------ANAC55(2)                             <---------YAB1                 <---------ANAC58                           --------->YAB1                   <---------ANAC58                          <---------ATHB12                 <---------TOE2(3)                    --------->LBD16                   --------->AHL20(2)                   <---------ANAC58                   <---------AHL20(2)                   <---------ANAC46                   --------->AHL20(1)     <-----------GT1             ------>ZmHOX2a(1)                <---------ZAT18  <---------TOE2(2)             <------- ----->CCA1(2)     <---------ANAC58           <---------ZAT14  <---------TOE1(2)       --------->AHL20(2) ---->ARR14(2)     ----------->GT1            --------->ZAT14--------->TOE1(2)       <----------DOF2   tatgcgagttaactcctaataccgtgaaatcataataggcaaattcagtccacaaattttttacgtaggattttgatattttccactctttatatataca  17647700                ------>MYB83<---------AHL20(2)            ----------->GT1                   ------>MYB83                ------>MYB46(1)          -------->P <<<<<<<<<<<<<<<<<LFY                    ------>MYB46(1)   --------->YAB1       --------->AHL20(2)         <---------WRKY38(1)           ---------->DOF2 ----GT1        <-----------HVH21       <-----------GT1   --------->YAB1     --------->O2 <---------MYB59   gtctataatcttcaaacctatcacctataaataatctacaatctaccatttagtcaacaatggtgaaatttctaaaccctcgtgaaagtctacctatctc  17647800                                           ------>MYB83                                           ------>MYB46(1)                                         --------->MYB46(3)                                         <---------MYB111(2)                                         <---------MYB55(2)                                         --------->AtMYB61                                         <---------MYB111(1)                                        --------->MYB46(3)                                       ------>MYB83                                       ------>MYB46(1)                                      --------->ANAC46                                     --------->DEAR3(1)                                     --------->MYB46(3)                                     <---------MYB55(2)                                     <---------MYB111(1)                                     <---------MYB111(2)                                    --------->ANAC58                        *TSS                                    --------->ANAC58                   --------->YAB1              <-                                  <---------ALFIN1                    <---------ATHB12         <-----                               <-----------GT1---------->DOF2         <<<<<<<<<ARR2            ------                             <-----------GT1<---------MYB52(2)      --------->WOX13(1)<---------HSFB2a(2)                   --------->ANAC46 --------->ANAC46              ------------>CBF --------->GLK1(2)   ccaaagtttctaattctatctacttcacatttttctccacccaccaactaaagtataagccttggaaaaacaatcaaaataagaaattctataagtcctt  17647900                --------->YAB1                                                                      -         --------->YAB1                                                                             <        <---------AHL20(2)                                                                         --       --------->AHL20(2)                                                                    ------->GAMYB   ------>ZmHOX2a(1)                                                                         --------  <---------ANAC46                                                                           ========  --------------->AGL15    <---------ZAT18                               --------->ZAT2     ---------  --------->TOE2(3)        --------->ZAT14 <---------DAG2   --------->DEAR3(1)              --------- ----------GT1 <---------ATHB12            <----------DOF2 --------->ANAC46          --------->At4g35610 -----DOF2  <---------AHL20(2)         <---------ZAT18  --------->MYB46(3)           <---------At4g35610 >ZmHOX2a(1)--------->AHL20(2)   <----------DOF2<----------DOF2          --------->At4g35610---------   tattccttatataataaatcataagttagtaaactcttttgttcacttttcttttgcatccaccgaagaaaaaccagcttcacaatgagctccaacgaca  17648000        <---------TOE1(2)       <-----------RAV1(2) <------ZmHOX2a(2)                                                      <------ZmHOX2a(2)     <------ -------->ARR11(3)                                                     <---------ARR11(3) <---------ANAC58 ---------ARR11(3)           <---------ATHB12                    ------->GAMYB      <------NtERF2 ------->GLK1(1)          --------->AtMYB61                ------>ZmHOX2a(2)       ------>NtERF2 --->RAV1(1)           --------->AtMYB61                   --------->YAB1          --------->LBD16 <- ==================RAV--------->MYB46(3)                  <------ZmHOX2a(2)  <---------ANAC58 <------ >MYB46(3)         ----------->HVH21   <---------MYB59   <---------ARR11(3)  <---------ANAC58<------- -->HVH21   <-------TEIL  <---------ALFIN1               --------->ARR11(3)<---------YAB1 <---------ANAC46 >ANAC46<---------TOE2(2)--------->MYB46(3)          <-----------GT1   --------->ARR11(3) <---------ANAC58   gagatcatcgcaggttcaactctgaccaccactcattctggcctaatccgtctacttacgatcttaacagcaagatcatgcttgccgcagtggcttcttt  17648100                                                          <---------ANAC46                                                          --------->DEAR3(1)                                                       --------->DEAR3(1)             <---------MYB52(1)                                            <-------TEIL------>NtERF2               --------->bZIP60(2)                                           --------->ARR14(1)                     <---------ALFIN1                                          <---------ARR14(2)                  <---------ANAC58                                          --------->ARR14(2)                  <---------ANAC58   <---                                          <---------GLK1(2)        --------->HSFC1(2)<-----------HVH21                                          --------->ARR11(1)       <---------HSFC1(2)<-----------TGA1                                        ----------->ARR10<------NtERF2        --------->ATERF1(1)----                                    <---------ANAC55(2)--------->ANAC46      <---------ATERF1(1)-----                                    --------->ANAC55(2)<---------DEAR3(1) --------->LBD16      ------           ------>ZmHOX2a(1)        --------->ANAC58 <---------ATERF1(1) <---------ANAC58      ------ ----DOF2 --------->TOE2(3)         --------->ANAC58 ------>NtERF2--------->GLK1(2)--------->LBD16--- --------LBD16                      --------->ANAC46--------->DEAR3(1)   <---------ANAC58     ------- ---------AGL15                 <----------DOF2     ----------->HVH21    <---------ANAC46    <------- ----------AGL3                <---------ICU4       --------->ANAC46 <----------DOF2--------->ANAC46   atctggagttatcctcatcgtcttcgctcttcatctttacgcaagattcgttctccgacgccgtagagaagctttccgtggcctccccgtcattttccgc  17648200                                                                                             <-------                                                                                        --------->ATERF1(1)                                                                                       ------>NtERF2                                                                                       <---------ATERF1(1)                                                                                    --------->At4g35610                                                                                    <---------At4g35610                                                                                  <------NtERF2  <----------DOF2                                                               <---------O2 -------- <---------DAG2                                                                 <---------ANAC58 ------ALFIN1                                                                   <---------ANAC46 ----->DEAR3(1)                                                                 <---------bZIP60(2) ---->ATERF1(1)          <------NtERF2                                          <---------ANAC58 >NtERF2<---------At4g35610                                                    ---------------------- --->LBD16        <---------ANAC58                                             <--------------------- --->NtERF2       <---------ANAC58    <---------WRKY38(1)                 ----------->HVH21 --------- -->ANAC46     ---------->CDC5      <-----------HVH21         <-----------RAV1(1) --------->ALFIN1  - --LBD16--------->At4g35610     ----------->RAV1(1)     <----------DOF2   <---------ATHB12------>NtERF2   cacccttttgagatgcctaagcgtggcctcaatcccacagtcatcgcttctctccctactttcactgttggagccactgatggcgtggctgcctccgcta  17648300                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             >>>>>>>>                                                                                             <-------                                                                                             >>>>>>>>                                                                             <-----------HVH21-------                                                                            --------->TGA1a  <-------                                                                    --------->ARR11(3)       <-------                                                                    <---------ARR11(3)--------->REM1(2)                                                               --------->ANAC58--------->ETT(2)                                                               --------->ANAC58--------->WRKY38(1)     --------->ZAT18                                       ------->GAMYB    --------->bZIP60(2)------   --------->ZAT18                                         ========================================== --At4g35610                                               ===========================MYC_MYB-------- ->LBD16                          --------->ANAC58       --------->ZAT2     --------->ANAC46 <------- ->TaNAC69(2)                     --------->ANAC58       <---------ZAT2     <---------TGA1a  >>>>>>>> --TaNAC69(2)      <---------ANAC58                     <---------ALFIN1    <---------O2 <----------- >ANAC46 --------->ALFIN1---------->DOF2                --------->MYB52(1)  --------->O2----------->HVH21 --------->DOF2    <---------ANAC58                --------->WRKY38(1)    <---------ALFIN1   --------   ctgaatgcgcagtgtgtctaagcgtgttaaaggagcaagacaaggcgagagagttgcccaactgcaagcacatcttccacgtcgactgtgttgacacgtg  17648400  Previous    Next  AGI:  At2g42360.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL2L (ATL2L) [Arabidopsis Thaliana] (GB:Q9SLC3); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G42350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69843.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 17647876    to: 17648868    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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