Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ANAC58    --------->ANAC46    --------->ANAC58  ---------->DOF2 -->TEIL-------->P                                                                                  < -----ARR14(2)                                                                                     -- -----ARR11(1)                                                                                 ------ ---->GLK1(2)                                                         <---------ZAT2           <----- ---->ARR14(2)                                                 --------->ZAT2                -------- ----CCA1(2)                         <------NtERF2        <---------ZAT14   ------>ZmHOX2a(2)<------- --ANAC55(2)                 <---------ATHB12        <---------ANAC46 <---------At4g35610   --------- ->ANAC58   ------>MYB46(1) ------>MYB83            <------NtERF2     --------->At4g35610 --------->ARR14(2) ->ANAC55(2)--------->MYB52(1)    ---------->ID1  <---------DEAR3(1)  --------->ZAT2      <---------ARR14(2) ->ANAC58   ------>MYB83    ------>MYB46(1)   ---------->DOF2  <---------ZAT2     <----------ID1 <---   tcttgaaagcaacctatcggagtcgaaaccaatcttgtcgtcgtcaacaaaagcggcgagaacagagctcggagctgatctaaaacgaagaagacccgac  17620200      --------->GLK1(2)     <---------ARR14(2)     --------->ARR14(2)   ----------->ARR10 --------->ALFIN1                                                       --------->HSFC1(2) ---------MYB52(1)                                                      <---------HSFC1(2) ------->LBD16                                                          --------->HSFB2a(1) --->ARR14(2)                                                        ================================ ----ARR14(2)                                                        ------->GAMYB --->HVH21              <---------YAB1                     --------->AHL20(2) ------>ZmHOX2a(1) --ETT(1)            <---------YAB1                 ----------->GT1 --------->ANAC58 >DEAR3(2)           --------->ICU4                 <---------ANAC55(2) <---------HSFB2a(1)       <-- ------LBD16 <---------ANAC46                 <---------ATHB12      --------->ANAC58              ---   ccggtgggattcgggtcgtagagatgattatttgaatccattaatcgaatcaatatgtaaaaaaaatgcaacgaaatttcctctgttttctcttcttgta  17620300            <---------O2            <---------bZIP60(2)            <---------ANAC46            <---------ANAC58            <---------ANAC58         ----------->TGA1         ----------->HVH21       --------->O2                            --------->YAB1       <---------ANAC58                        --------->TOE2(3)       --------->TGA1a                       <---------ARR11(1)       --------->ANAC55(2)                   --------->ARR14(2)       <---------O2                          <---------ARR11(3)      --------->MYB46(3)       <---------ANAC55(2)                   <-----------ARR10    <---------WRKY12       <---------TGA1a                      <---------CCA1(2)    --------->DOF5.7(2)       <---------ANAC58                     ------>MYB46(1)     <-----------HVH21     <-------------DYT1                     ------>MYB83        --------->TOE1(3)        <----------DOF2   <-----------HVH21<------ZmHOX2a(1)       <---------ARR14(1)  --------->TOE2(3)        <---------DAG2 ================MYC_MYB          --------->HSFB2a(2)   <----------DOF2          ------->TEIL -------At4g35610<-----------RAV1(2)    >>>>>>>>>MYB2  <---------ANAC58       <---------YAB1 ------>At4g35610<---------LBD16  <---------HSFB2a(2)  <---------ANAC58 <---------MYB52(1)        XXX   agctctgtctcgtgacgtttcaggaagaacaaatttgtagaaaaccaaatcttaatagctttccaacgtcaaccgttgatatgaatataagctttttctt  17620400                                 --------->LBD16                                --------->LBD16                           <---------ARR14(2)                          <----------DOF2                                 --------->ARR14(2)                          <---------DAG2                                 <------ZmHOX2a(1)                       <-----------GT1                              --------->ALFIN1                     <-----------HVH21                              <---------REM1(1)          <---------ARR11(3)    <---------LBD16                   --------->At4g35610          --------->ARR11(3)   <---------LBD16                  <-----------RAV1(2) xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)--------->LBD16              <---------At4g35610          --------- XXXXXXXXXXXXXXXXXX>MIR4221   <---------LBD16                  <---------ZAT2               ---------   ctcccttgttaagttcttgtttgtgtcacttttcccgggaaaacaaaacttgagcttgagatgtgagcaggtgtaggatttgggaaatataaaaccttga  17620500                                                             <---------YAB1                        <-                 <---------ANAC46                   --------->ZAT14                       <---------YAB1                 <---------ANAC58                 --------->At5g28300       --------->At4g35610   <--      --------->MYB52(1)                         ----------->GT1            --------->CCA1(2)------->TEIL      ---------->DOF2     ------------------------>ANAC81  --------->At4g35610         <---------YAB1 >TOE2(3)        <---------ANAC58             --------->MYB52(1)   <------ZmHOX2a(1)   --------->ICU4 >TOE1(3)     <---------ARR14(2)       ---------->DOF2     <---------At4g35610<---------REM1(1)  *TSS   aggggaagtaaaggaggtttcgtctgaagatgaagaagagagaaagaagaacggtgaagtctgatgagaggaagagagagatgaaggtgatgatgaatat  17620600                                                              ---------->DOF2                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         <---------ARR14(2)                                                         --------->ARR14(2)                                                       <---------ATERF1(1)                                                       <---------MYB46(3)                                                      <---------ANAC46                                                      <---------DEAR3(1)                        -----                                                    <---------RAP2.3(1)                   <----------                                                   <---------RAP2.6(2)                  <---------YAB1                                                   <---------RAP2.3(2)                 --------->AHL20(2)                                   <---------AHL20(2)<------NtERF2                    --------->YAB1                    --------->GLK1(2)<------------CBF<---------LBD16                 <---------YAB1           <---------ANAC58        <---------YAB1  <---------RRTF1(3)             <---------AHL20(2)           <---------ANAC58      --------->TOE2(3) <---------RRTF1(2)             --------->AHL20(1)     <----------DOF2<---------ARR14(2)             <---------DEAR3(1)             --------->AHL20(2) ----------GT1      --------->ARR14(2)<---------WOX13(1)<------NtERF2   <-----------GT1<---------AHL20(2) ---------GT1<---------At4g35610 <----------DOF2 --------->MYB52(1)<----------DOF2<---------AHL20(1)   ttatcgtctttttgcttctgagtttctgcgtccaactttaattgctgaagatagcggcggatccaaaagcttttttaccaaaaatttattaaaattgaaa  17620700                                            <----------DOF2                                           <---------DAG2                                     ---------->TaMYB80                                  --------->LBD16                                 --------->ANAC58                <------NtERF2    --------->ANAC46                ----------->RAV1(2)--------->At5g28300               ------>NtERF2     --------->ANAC55(2)              --------->RAP2.3(2)--------->ANAC58              --------->RAP2.3(3)--------->ANAC55(1) --------->O2 --------->DEAR3(1)<---------LBD16 <---------O2 --------->RAP2.6(2)<---------ANAC55(2)                                                < ----->DOF2 <---------At4g35610--------->MYB52(1)     <---------AHL20(2)                        ----- --CBF     --------->ANAC46  <-----------HVH21  --------->YAB1          <-----------GT1   --------->GLK1(2)   aagacgtcgttttaagccgcctgtgaggctgagtcacggaaaatgccttttcatattttttttcaagaacaattttactactatttcttaagaatatgaa  17620800                                                                                                   --                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                               ======                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                <---------ARR11(3)                                 ----------->GT1 --              <---------AHL20(2)--------->ARR11(3)       <---------YAB1        <-------MYC3  <------- -----------GT1        ---------->DOF2               <----------DOF2           ------->MYC3 <-------- -->TEIL--------->AHL20(2)    ----------->ARR10<-------TEIL           <------ZmHOX2a(1)   <----------   tttttctatataaaatgtaattgagaaaagagtagattttagatgaaaatacatactttatacttgtatacaggaagagcatgtgaagtaaattacctac  17620900                                       -------->ATHB1                                       --------->YAB1 <---------ATHB12             --------->LBD16 ---->MYB83                   <-----------HVH21 ------MYB59                 --------->ANAC46 ------MYB111(1)             <---------ANAC55(2) ------MYB46(2)              --------->TGA1a ======================================MYC_MYB >MYB83                      <---------O2 -->P                        --------->ANAC55(2)                                       <-----------GT1 >MYB46(1)                   --------->O2                                          <---------AHL20(2) -->MYB55(1)              ------->TEIL <---------ICU4                              --------->AHL20(1) --MYB46(2)     <---------ZAT14       --------->ICU4                               <---------AHL20(1) --MYB59        --------->ZAT14       --------->AHL20(2)                      <---------YAB1--------- --MYB111(2)    <---------ARR14(2)    <---------ATHB51                       --------->ARR11(3) ---->MYB46(1)  --------->ARR14(2)    <---------AHL20(2)                     <---------ARR11(3) --MYB111(1)    --------->ZAT18----------->HVH21                          --------->YAB1   <---------GLK1(2) -ANAC55(2)<---------ANAC46  <---------TGA1a                           --------->TOE2(3) <---------YAB1 -GT1 <---------ICU4   <---------WOX13(1)<---------YAB1             ------->TEIL   --------->AHL20(2)   ctaatcaattttgacgagtatactgatggacccgtgacaaattattatttctcatcttataatctacatgtatccataatatcattttattacgattctt  17621000                                                                                                 ----                                                                <---------ARR11(3)               ----                                                     --------->ANAC58  <-----------RAV1(1)       <---                                                     --------->ANAC58 ------->TEIL               <---      <----------DOF2  <---------ANAC55(2) <---------AHL20(2)   --------->ARR11(3)             <-----   <-----------GT1     --------->ANAC55(2) --------->AHL20(2)  --------->CCA1(1)              <------ >GLK1(2) ---------->ID1             --------->TOE2(3)         --------->RVE1(1)           <---------ANAC46   gtttttttctttgtctctgtaaaatatgtgatgtttctaccctaatttataacacacgaacaaaaatatctgtatgttggggacaatgaaatcgctggta  17621100  Previous    Next  AGI:  At2g42280.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G51140.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62935.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 17618263    to: 17620597    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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