Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------------AGL15                                                        <-----   --------->AHL20(1)     <------ZmHOX2a(1)                                             <----------DOF2  --------->YAB1  --------------->AGL15                 <------ZmHOX2a(1)        <---------ANAC58 ------>GT1       <----------DOF2                  <---------ZAT6                <---------AtLEC2 --->DAG2      <---------AHL20(2)           ------>ZmHOX2a(1)                    <---------ANAC58 --->DOF2      <-----------GT1   ---------->DOF2   <---------REM1(1)<----------DOF2     <---------DAG2   gtaaaaataatgcaaatttacttttgtaggaaaaaaaaagagagtcctacttagtgtaggacatatgcctctttttagtctttgcatgccctttataaga  17563400                      ------>ZmHOX2a(2)                    <---------ARR14(3)                    --------->ARR11(3)                    --------->ARR14(3)                    <---------ARR14(2)                    --------->ARR14(2)                    <---------ARR11(3)          <---------TGA1a               <---------TOE2(1)                <---------O2               <---------TOE1(1)           <---------ANAC58               --------->ANAC58            <---------SPL7                 <---------ANAC58               --------->ANAC46          --------------->AtSPL3<---------GLK1(2)                  >>>>>>>>>TBF1                 ----   <-----------GT1 <------ZmHOX2a(1) <-----------RAV1(1)        >>>>>>>>>TBF1                    ---- ----------------WRI1<------ZmHOX2a(2)    <------NtERF2      >>>>>>>>>TBF1--------->ANAC58    <------   gaaattaacaaggtcgtactaggatcttgaaacacattcttgttggcgagacgagagaaggaagaagaagaagaacaagacacagagagagagacaccac  17563500                           --------->KAN4(2)                          --------->HSFB2a(1)                          <---------KAN4(1)                          <---------MYB46(3)                        <------------CBF                       --------->ATHB12                      --------->ICU4                      <---------YAB1                    --------->MYB52(1)                 <---------ANAC55(2)                 --------->ANAC55(2)                <-------TEIL              <---------GLK1(2)         ------>ZmHOX2a(2)    <----------DOF2              --------->ARR11(1)      --------->ARR11(3) <<<<<<<<<GT-1 <---------AHL20(2) ----->TOE2(3)--------->ARR14(2)  <----------DOF2        <-----------GT1                       ------ ----->TOE1(3)<---------ARR14(2)===============HOX2a_HOX2a  <---------DAG2                   <------- ---ALFIN1  ----------->ARR10   ------>ZmHOX2a(1)      <---------WOX13(1)   ----------->GT1 ---------   cttaatttgagagtaagattcgtaacgattgttcctctttgatctctctccaagttgatttaccttttgctattttttttgttaaaacggttttcgttag  17563600                             <--------ATHB1                             --------->YAB1                             <---------ICU4                            <---------ATHB12     --------->DAG2         --------->ICU4                                        <<<<<<<<<TBF1    ---------->DOF2         <---------ATHB51---------->DOF2                 <----------DOF2 ----->GT1              <---------ATHB12--------->ANAC58                ------->TEIL    --------->LBD16 --MYB52(1)          <---------AHL20(2) --------->ANAC58               <-----------GT1 <---------HSFB2a(2) >TOE2(3)     <---------TOE2(3)         --------->ANAC46           <------------CBF    --------->HSFB2a(2)   taaaataaaagtggataatgtttttaatcaataatggattacaagccaaagaaacaagtttgtgatacaaattgaacccttttcttcttccccaagtgtt  17563700                                       <---------ANAC58                                       <---------ANAC46                                       <---------ANAC58                        <-----------TBP                             <-------GAMYB                                     --------->AHL20(2)                          --------->At4g35610                         <---------HSFB2a(2)                      --------->ARR14(2)                              --------->HSFB2a(2)                      <---------ARR14(2)        <---------DAG2       <---------LBD16                 <-----------GT1  <-----------RAV1(1)           --------->AHL20(2)               <---          <---------YAB1  <---------At4g35610   <----------DOF2 <---------AHL20(2)          <--------   tgtgatttgattttgattcttacagttctgctgttaatgctgcgtttgaacttttttatgacttaattttttgtggaagcattatatatgtttactttag  17563800                                                                --------->TOE2(3)                                                                --------->TOE1(3)                                                                ----------->GT1                                                               --------->ANAC58                                                               --------->ANAC58                                          ----------->HVH21    ----------->GT1                                   ----------->HVH21          <-------TEIL            --------->At4g35610    <----------ARF1            <-----------------------TaNAC69(2)          <-----------RAV1(2)  <---------ANAC46             <---------ARR14(2)         <---------At4g35610 <---------ANAC46             <---------------AtSPL3         --------->At4g35610 <---------ANAC58             <---------------AtSPL8                   <-   --------->RAP2.6(3)       <---------ANAC58            <-----------RAV1(2)     <----------DOF2   -- ------GLK1(2) <------ZmHOX2a(1) --------->ALFIN1   <---------AtMYB61            <---------DAG2   --- --DOF2 <-----------HVH21  <---------ARR14(2)       --------->ALFIN1 ---------->DOF2      -----------   attatttcggcatcagaggacatgaagcctatcgtgtgtgacaagggacatggaatggtgcaggtacgttaaaaagaaacacactttttttttggttaat  17563900  <---------TOE2(3)  <---------TOE1(3) --------MYB52(1)                            <---------AHL20(2) ------->DOF5.7(2)                 <---------ANAC58 ------>TOE2(3)         --------->ZAT6       --------->AHL20(2)                      <---------ANAC46 >GT1            <-----------GT1   <---------ANAC58<-----------GT1      <---------LBD16   cgttaaggcttcgattgttttactaaacactatttatgcgtttatattaaaataaaccatattttgacctatactctggagtatttctcgtgaaacgttt  17564000                                                                                   <---------MYB46(3)                                                                                  --------->ALFIN1                                                                                <---------O2                ----------->GT1                                                 <---------TGA1a              <---------WOX13(1)                                                <---------ANAC46            --------->ATHB12               <---------ANAC58                     --------->O2           --------->AHL20(2)              <---------ANAC58                     <---------ANAC58           <---------AHL20(2)          <---------GLK1(1)                        <---------ANAC58           <---------AHL20(1)          --------->GLK1(1)   ===============================bZIP_DOF           --------->AHL20(1)         <---------ARR14(2)   ---------->DOF2      <---------bZIP60(2)          <---------ATHB12            --------->ARR14(2)  --------->AtMYB61   <-----------HVH21        --------->WOX13(1)          <------NtERF2        --------->ANAC58    <-----------RAV1(1)  <---------ANAC58                 --------->LBD16       --------->ANAC58   <-------MYC3  <---------ANAC58               <---------LBD16        ----------->RAV1(1) ------->MYC3        -----   tgttaagtgccaattaattggtgaaacattttgaaggcgggatttgctggagacgaagcaccaaaggttgtgtttccatgtgtcgtgggtcgtccaagag  17564100                                                    <---------RVE1(1)                      <-----------RAV1(1)          --------->ARR11(3)                <---------ARR11(1)                 <---------ARR11(3)                <-----------ARR10              ------->GAMYB                --------->ARR14(2)          ----------->RAV1(1)                          --------->TOE1(3)                --------->GLK1(2)       --------->ANAC58                                 --------->TOE2(3)                ------->TEIL            --------->AtLEC2                   <---------ATHB12                <---------ARR14(2)   --------->WRKY18(1)                 --------->MYB52(1)      <---------ARR14(2)            --------->ARR11(3)                <<<<<<<<<<<<<<<<<LFY  <--------      --------->ARR14(2)--------->ALFIN1--------->ANAC58              >>>>>>>>>>>>>>>>>LFY--------->DOF5.7(2) ---->CCA1(2)  <---------ARR14(1)   <-----------HVH21            ---------->DOF2        ----------->GT1   atggattgaatccgaacgaatcttatgtgggagaagaaggtcatgccaacagagatattctcacacttaaagacccaatggagcatggtatcgttaacaa  17564200                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                  --------->ALFIN1                                                --------->ALFIN1                                              <---------ANAC55(1)                                              <---------O2                                              --------->ANAC55(2)                                              <---------ANAC55(2)                                              <---------ANAC58                                              <---------ANAC46                                              <---------ANAC58                 --------->CCA1(2)            --------->O2                --------->ARR11(1)            <---------TGA1a                --------->ARR14(2)            --------->TGA1a                <---------ARR11(3)      ------->GAMYB--------->ARR14(2)                             -                --------->ARR11(3)      ================MYC_MYB       --------->ZAT14            ----                <---------ARR14(2)<---------HSFB2a(2)<---------ARR14(2)                          ----      <---------bZIP60(2) <---------ZAT14    <-------TEIL             <---------ZAT14         <------   ----------->HVH21      --------->ZAT14 --------->ZAT2 ------>ZmHOX2a(1)                ------>ZmHOX2a(1) -DOF5.7(2)   ----------->ARR10   --------->HSFB2a(2)--------->ARR11(3) ------->TEIL <---------At4g35610   ttgggatgacatggagaagatttggcactatactttctacaacgagctacgtgtggatcctgaagaacaccctgtacttctcactgaagctccttataac  17564300  Previous    Next  AGI:  At2g42090.1    Description:  ACT9 (ACTIN 9); structural constituent of cytoskeleton. Identical to Putative actin-9 (ACT9) [Arabidopsis Thaliana] (GB:P93738); similar to actin, putative [Arabidopsis thaliana] (TAIR:AT2G42100.1); similar to actin [Hordeum vulgare] (GB:AAN59956.1); contains InterPro domain Actin/actin-like; (InterPro:IPR004000); contains InterPro domain Actin, conserved site; (InterPro:IPR004001) Range:  from: 17563822    to: 17565447    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version