Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                ------->GAMYB                                                                             <---------MYB52(2)                                               <---------AHL20(2)            <---------MYB111(2)                                               <---------YAB1                <---------MYB55(2)                                              --------->AHL20(1)             --------->MYB46(3)  <---                                              <---------AHL20(1)      <---------WOX13(1)   ------>MYB46(1)                                              --------->AHL20(2)    --------->ATHB12       ------>MYB83   --------->ANAC46                     --------->ANAC58         --------->ZAT2          <---------MYB59 <-----------GT1                        --------->ANAC46         --------->At4g35610     --------->MYB46(3) --------->YAB1                         --------->ANAC58         <---------ZAT2         --------->ANAC46 ------>YAB1                       <---------YAB1                <---------At4g35610    ------------- ------>DOF2                   <---------GLK1(2)               <-----------RAV1(2) --------->WOX13(1)   aaatcacaacacaataccctaagctagaattcaaattctcattcgcaatataattgcaactaaattcagctgattgccaacaaaccaattacccaactag  17519600                         --------->DAG2                        ---------->DOF2                  <-------TEIL                 --------->AtLEC2                --------->LBD16             --------->ATHB12               <---------ANAC58             --------->ATHB51            --------->ARR14(2)             <---------YAB1            --------->GLK1(2)            --------->ANAC46         <---------ANAC55(2)             --------->ANAC55(1)            ---------->DOF2 ---ZmHOX2a(1) <---------ANAC58          <---------ANAC55(2)      <---------GLK1(2)         <-------- ---->AGL1  <---------ARR14(2)           --------->ANAC55(2)<---------ZAT14  --------->CCA1(2)   gagtccaaaacaagtatccgtgcatataaagtaatcccataacacataattgaaacggagactgaagagaatttcaaagagatgaatgagatagaaatgc  17519700                                                                      --------->AHL20(2)                     <---------ANAC46                                <---------YAB1                 --------->At4g35610                               <---------ICU4              --------->At4g35610                                 --------->AHL20(2)              <---------ZAT2                                      <---------AHL20(2)              <---------At4g35610                                 <---------ATHB51              --------->ZAT2                             ----------->RAV1(2)             ----------->RAV1(1)                         <---------LBD16                           <-           <---------ZAT14                          <----------DOF2-------->ATHB1                  --       <---------ALFIN1----------->GT1      <---------ALFIN1      --------->ICU4                <----      --------->MYB46(3)                   <---------ZAT18 --------->LBD16--------->ANAC46      ----- -GLK1(1)  --------->ZAT14                 --------->ZAT18 ------>ZmHOX2a(1)               <---------   gaaaactgaccactgcagcagcatcgtgtaaaactggagttatcgtccactctcctttctcctgagaaattattaaacacaagaacatgagtctcagacg  17519800            --------->TOE2(3)                                                              --------->ARR14(2)      --------->ANAC46                                                                     <---------ARR14(2) ----------->HVH21                                    <---------TOE2(3)                --------->At4g35610 --------At4g35610                                    <---------TOE1(3)                <---------ZAT2 ------->At4g35610     --------->ZAT14     ------->GAMYB                               --------->ZAT2 -----HSFC1(2)         <---------ZAT14    <---------MYB52(2)                    --------->ZAT18 ---->HSFC1(2)--------->ANAC46           <---------At4g35610                   <------ZmHOX2a(1) --RAV1(2) <----------ID1                --------->At4g35610       ---------->DOF2  --------->DEAR3(1)   cttctgacacaaaaccacaaaacactgtagaagaaactttggcaactcactgaattagggtttaagagagaaagacaacgaggacaccgagcagaaccaa  17519900                                          <---------HSFB2a(1)                                          --------->HSFB2a(1)                                          <---------HSFC1(2)                            <---------GLK1(2)                            --------->ARR14(2)                            <---------ARR14(2)                    --------->ICU4        --------->HSFC1(2)                 <------ZmHOX2a(2)  ------>NtERF2       --------->YAB1<---------ICU4--------->ANAC58      <-------TEIL--------->YAB1 <---------ALFIN1     --------->ARR14(2)    --------->ARR14(2)    <---------YAB1 <-----------ARR10                                <------ZmHOX2a(2)    <---------ARR14(2)  --------->YAB1--------->DEAR3(1)                       <----------DOF2-------   <------ZmHOX2a(1)<---------YAB1 --------->ANAC58   <---------ARR14(2)   ======================HOX2a_HOX2a   =====================HOX2a_HOX2a--------->ANAC46<---------ANAC46        ------>ZmHOX2a(1)<--------   gaccaggattcatagtcggatcataatcaagattcccacgccgaagcttctcttcgtatacttgtctcgttcccatcctctctttctctccgatcaccgt  17520000                --------->KAN4(2)               --------->HSFC1(2)               --------->KAN4(1)               <---------HSFC1(2)     ------>NtERF2               --------->HSFB2a(1)   --------->ANAC46               <---------HSFB2a(1)   --------->ANAC58                                   <---------YAB1          --------->LBD16 <---------ALFIN1        <---------At4g35610                  <-------------          --------->HSFB2a(2)        --------->ANAC58                                  <-------------          <---------HSFB2a(2) <-------GAMYB--------->MYB52(1)              <----------DOF2        === -->DEAR3(1)   <---------KAN4(1)*TSS --------->REM1(1)         --------->AHL20(2)   <----------DOF2 -At5g28300   <---------KAN4(2)<---------MYB52(1) --------->At4g35610      <---------DAG2         ---   ctctcttctctccgagaatgttccttctccaccgttgctacgccataactgaagcttacaactaataaactactgggccttatgggctttcttattctgg  17520100                --------->TGA2(2)               <-----------TGA1               <-----------HVH21              --------->bZIP60(2)              --------->ANAC46            --------->At4g35610              <---------ANAC55(2)         <---------At4g35610              --------->ANAC55(2) --------------->AGL15              --------->ANAC58    <---------------AGL15    ---------->DOF2              ----------------->AG   --------->AHL20(2)            ----------------->AGL3            --------->ARR11(3) ----AGL1     --------->ANAC58   ----------------->AGL1     --------->ZAT6                      ----- ----AGL2    <-----------STF1    ----------------->AGL2   <-----------GT1 <<<<<<<<<TBF1         <---- =================================================MADS_MADS --------->ANAC46 <<<<<<<<<TBF1      ----- -------------->AGL3 <-----------TGA1<------------CBF    *TSS      <---------ARR11(3)          ------   cccaaataaagacactacgtcatcgtcatcgtcttcccaaattgagatgccctacaaaattcacactactatcttcttcttcttcgatttagcacagaag  17520200        <---------YAB1                                                                              -  <XXXXXXXXXXXXXXXXXXXXMIR172A/B                                                 <-----------HVH21 -- <XXXXXXXXXXXXXXXXXXXXMIR172C/D                                          <-----------ARR10        --- ---->ZAT2              <---------ANAC58        <----------DOF2         <---------GLK1(2)        ---- -----At4g35610         <---------ANAC58 --------->At4g35610       <----------DOF2         <--------- ---->At4g35610      <----------DOF2     <---------At4g35610      <---------ANAC58   <---------CCA1(2) --->GLK1(2)        <---------DAG2    <<<<<<<<<TBF1<-----------GT1<---------ANAC58<------NtERF2  ----   ctgcagttttatcaatgttctccctttcgtttccatcttcttcttctgcccttttaccttctctcgttgctttcgattcttcgcgtcgtctctctttgca  17520300     ----------->GT1 --------->DOF2                             <---------ARR11(3) ----->GAMYB                          --------->TOE2(3) ------>MYB46(3)                 <-----------GT1 ----->ANAC58              <---------ANAC55(2) -DOF2                     --------->ANAC55(2) ----->ANAC58       ---------->DOF2<-----------GT1                                      <---------ANAC46   accaaagaagttaaatcgtcttcaaagtcacttattttcacctcaacatctctcattctctcagtctaatgtctctcgttacagagcgttttgtgtttct  17520400                                                                 ------->TEIL                                                                 <---------ARR11(1)                                                             <---------HSFB2a(2)                                                             --------->HSFB2a(2)                                                             --------->HSFC1(1)                                                         ------>ZmHOX2a(1)                 --------->KAN4(2)          --------->HSFB2a(2)                            <----------DOF2             --------->ANAC46          <---------HSFB2a(2)      --------->GLK1(1)<------MYB83 --------->GLK1(2)<---------ZAT14        ------>ZmHOX2a(1)          <---------GLK1(1)<------MYB46(1)               --------->ZAT14  <---------ARR11(3)       --------->LBD16      --------->ATHB12<---------CCA1(2) --------->ZAT18 <--   tcaagctctcctccagagggaacagtctccgtagtcgatttccatgagaaagattggtcctttctcgaatctatggaaattgactccactgaacatactc  17520500  Previous    Next  AGI:  At2g41945.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23431.1) Range:  from: 17517918    to: 17520032    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g41950.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO23423.1); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335) Range:  from: 17520157    to: 17521245    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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