Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->At4g35610               <---------At4g35610                                --------->At4g35610       --------->ZAT6                                 --------->ANAC58                    <---------ATHB12  --------->ARR14(2)                      <----------DOF2---------->DOF2          <----------DOF2  <---------ARR14(2)          ---------->DOF2         --------->ANAC58       ---------->DOF2   ctcgaattctcactagcagctcttaacatctcaaaagctggaaacttttggtttggaagcaaagtatcagttggagtaccaaagctttgccaaacaatct  17487000                                                                                                  ---                                                                                               ------                                                                                               ------                                                                                               ------                                                                  <-------TEIL               --------                                                     <-------TEIL--------->ARR14(2)          <-------                                                    --------->CCA1(2)                       ---------                                         ---------->DOF2         <---------ARR14(2)         ---------                                      --------->ANAC58          <---------MYB52(1)          ---------                              <---------ICU4       <---------ARR14(2)                     <---------ALFIN1              ----------->RAV1(1)     --------->ANAC58     <---------ARR14(2)         --------->LBD16             --------->MYB46(3)    --------->ANAC46--------->ARR14(2)               <---------LBD16   <---------CCA1(2)          --------->YAB1      <------ZmHOX2a(1)            ----------------->AGL1   cttctctatctttcaacaacacaagattaccatcatcacgaagcaaagcagaggatacagagaaccggttcgtcttgctattccaaaccggaacacccaa  17487100                                                                                       --------->MYB52(1)                                                                                  --------->ANAC58                                                                                  -------->P                                                                                  --------->ANAC58 ------->DOF2                          ---------->DOF2                          --------->MYB46(3) >MYB46(1)                         --------->At4g35610                          --------->AtMYB61   - >MYB83                            <---------At4g35610                         <---------At4g35610  - ----->RAV1(1)              <---------ANAC46                                  --------->ANAC58     <- ->MYB46(3)                 <---------YAB1                          <---------ALFIN1------->GAMYB <-- --MYB55(2)            --------------->AGL15                  --------->ANAC58--------->ANAC58   <--- >ANAC46               <---------------AGL15                  --------->ANAC58--------->ANAC46 ------ >ANAC58              ----------------->AGL1            --------->YAB1   --------->At4g35610   ------ >ANAC58              ----------------->AGL2           <---------YAB1 ----------->RAV1(2)    --------   caaagaatcaaacaaaaccaattctccattacgagtaagctcaaagtaagagctgttatcagaaacgacaacacctgctccagcaacccaaacgaccttc  17487200    --------->YAB1   <---------YAB1 -------->WRKY12 -------->WRKY38(1) --------MYB52(1) -----GAMYB                                                    --------->ZAT2 ------ANAC46                    <---------ARR14(2)   --------->ANAC58                           <--- >MYB46(1)                       --------->ARR14(2)   --------->ANAC58                       <------- >MYB83                    <-----------GT1          ---------->DOF2                         >>>>>>>>> ->AtMYB61            ----------->GT1         ------->TEIL   <-----------RAV1(2)           <---------   cgttgatcataagggattgaattggagttaaaccagataccaatgctgaaccgattaagcaaaccaggtggattaaaaaaacctagagcaaaatcaccat  17487300    <---------GLK1(1)            --------->ZAT2    --------->GLK1(1)          ------->GAMYB      ------->TEIL   --------->ARR14(2)      --------->MYB46(3)    <---------GLK1(2)                   --------->ZAT6   <---------ARR14(2)     ------>MYB83        <---------WOX13(1)         --------->ANAC58 --------RAV1(1)          ------>MYB46(1)   ------>MYB83                 <----------ID1 --YAB1                --------->MYB46(3) --------->TOE2(3)              --------->ANAC46 >>>>>>>>LFY         <-----------GT1      <---------MYB59                --------->ANAC58---------->DOF2 --GT1  --------->ANAC46 ----------->RAV1(1)------>MYB46(1)      --------->GLK1(2)  --------->ZAT18   tgttggatacccacaaggtgttttcaccaacaacgagcttagaacctaattgaatctctgaaacaacaatctgaaacgccaagaagaacactaaagagag  17487400                                                     ------->GAMYB                                                  ----------->RAV1(1)   <<<<<<<<<<<<<<<<<LFY                                                 --------->MYB46(3)---------->DOF2                                              --------->MYB46(3)--------->ANAC58                                         <------ZmHOX2a(2)      --------->ANAC58                                         --------->CCA1(2)      --------->ANAC46                 --------->HSFC1(2)     --------->ARR11(3)   <-------TEIL                 <---------HSFC1(2)     <---------ARR11(3)  --------->CCA1(2)          <---------ZAT2                --------->AGP1     <---------ARR11(3)                <-------          --------->ZAT2               --------->GLK1(1) --------->ANAC58            --------->At4g35610  ---------->DOF2--------->HSFB2a(1)   <---------GLK1(1) --------->ANAC58            <---------At4g35610   acacaaaagcagagctcgaagcatcttcatgtctgatttagagatccaacaacaacagcaagatacaaggaaagagacactggtttcatctcaacatgat  17487500                                                                    --------->TOE1(3)                                                    <---------RVE1(1)                                                    <---------CCA1(1)                                        <----------DOF2             --------->TOE2(3)                           --------->AHL20(2)      <---------ARR11(3)                         --------->YAB1 --------->TOE2(3)         ------->TEIL            --------->ALFIN1                     <---------------AGL15         --------->ARR11(3)                 ---------------                     --------------->AGL15         <---------ARR14(2)                 ===============                    =================================================================================                    ----------------->AGL3  ---------->DOF2   --------->YAB1         <--------------- --YAB1     --------->TOE2(2)           --------->TOE1(3)<---------YAB1             -------->P<------   tccaaaatccaaaacctgtgtttccaaaaataaaaacccaaactttaaaagaagatattatgaataagaacctcaaaacaaatttctaccaggtatggca  17487600                                  --------->CCA1(2)                                 --------->ARR11(3)                                 <---------ARR11(3)                            <---------ALFIN1                            ----------->RAV1(1)                           --------->MYB46(3)                         <---------TCP15(1)                         <---------TCP20                                                <---------MYB46(3)                         --------->PCF2                                              <---------ZAT6                    <------------CBF                                           <---------AHL20(2)                --------------->AGL15                                          --------->AHL20(2) >AGL15         <---------------AGL15                                         --------->ICU4 ===============================MADS_MADS                       <------------CBF     <-----------RAV1(1) =MADS_MADS    <-----------------AGL1                 --------->ICU4          <---------ATHB12 --AGL1        <-----------------AGL3            --------->ANAC58           --------->WOX13(1) ---ZAT18      <-----------------AGL2            --------->ANAC58         ------------>CBF   cttgaagaagcttaatttcttatattggacccacagatatatcaaatcaccaagtaagtatcaacaaattgaccagagcaattaatagtgttgttgacga  17487700                         --------->DAG2                    --------->LBD16                                          <---------WRKY18(1)                   <---------HSFB2a(2)                                  --------->ICU4                   --------------->AGL15                                <---------YAB1                  <---------LBD16                                     ---------->DOF2          --------->YAB1---------->DOF2       >>>>>>>>>TBF1        <---------ZAT6  ---------->DOF2  -        <---------WOX13(1)    --------->MYB52(1)           ----------->GT1 <---------WOX13(1)       <     <---------YAB1--------->HSFB2a(2)<----------DOF2    <---------ANAC46--------->ATHB12      <-----   aaaaattttgatttataatctccagaaaaagctaactgaactttcgaagaagaattgtggagggtattactgtaaagattgaccataaagacagagactt  17487800                    --------->AHL20(1)                    --------->ARR11(3)                    <---------ARR14(3)                    --------->ARR14(3)                    <---------ARR11(3)              --------->ANAC58              --------->ANAC58             --------->PCF2            --------->TCP15(1)                     --------->ATHB12 <---------ICU4  ----------->GT1   --------->ARR14(2)            <---------ATHB12  <---------GLK1(2)    <---------ANAC46 -------->At4g35610 <---------AHL20(1) <---------AHL20(2)        --------->YAB1          ----------->GT1 ---------At4g35610 <---------ARR14(2) --------->AHL20(2)    <---------YAB1         <---------At4g35610 -----DOF2  <---------PCF2         <------ZmHOX2a(1)   --------->ZAT18             ------->TEIL   taagctgaaaaatgggacccaagatattgagtttgaaggatttaaaaactcaatgagtggattactataagaatttcagagaatgaagctgttgtgaaat  17487900  Previous    Next  AGI:  At2g41890.1    Description:  curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G34300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23559.1); similar to Apple; Protein kinase; EGF-like, subtype 2; Curculin-like (mannose-binding) lectin [Medicago truncatula] (GB:ABN08213.1); contains InterPro domain N/apple PAN (InterPro:IPR003014); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro Range:  from: 17485136    to: 17487430    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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