Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->WRKY12                                                                ----------->HVH21                                                                --------->WRKY38(1)                                                               <---------MYB52(1)                                                              --------->At4g35610                                                              <---------At4g35610             --------->HSFB2a(2)                         <---------ANAC58      --------->WRKY38(1)                                <---------RAP2.6(2)      <---------ZAT18                                    <---------ANAC46      --------->ZAT18                                    <---------bZIP60(1)    <-------MYC3                                         <---------ANAC58    ------->MYC3                             <--------HAHB4   --------->LBD16    ------->MYC2                             --------->YAB1 <-----------RAV1(2)    ------->PIF5                             <---------ICU4<------NtERF2    <-------PIF5                            <---------YAB1<---------SPL7    <-------MYC2                            <------ZmHOX2a(2)<---------MYB46(3)   <---------ANAC58                         <---------ATHB12--------->SPL7   <---------ANAC46            <---------ANAC58   <---------ANAC55(1)            ---------->DOF2   <---------ANAC58            <---------ANAC58   <---------ANAC58      <---------ANAC58   --------->YAB1 <---------ANAC58              <---------ANAC46   <---------ANAC46      <---------ANAC58  --------->At4g35610 <---------ANAC46  ------->GAMYB <------NtERF2    <---------ANAC58   <----------DOF2      <---------At4g35610 <---------ANAC58 --------->MYB46(3)        --------->ICU4<-----------HVH21   ----------->GT1  ------   ttagcgcgtggacttctctaaccacagtctctggcgtctcatcgcgatcattacttgtggcgtccggtgacctttcttgatggtaaagagtcagcataat  17479600                                                   >>>>>>>>>TBF1  --------->ARR11(3)                                                >>>>>>>>>TBF1     <---------ARR11(3)                                             >>>>>>>>>TBF1  >>>>>>>>>TBF1                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         ------>ZmHOX2a(2)>>>>>>>>>TBF1  >>>>>>>>>TBF1                     <---------YAB1    >>>>>>>>>TBF1  >>>>>>>>>TBF1<------ZmHOX2a(2)               =================HOX2a_HOX2a xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            ------>ZmHOX2a(2)               <------ZmHOX2a(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     ---------->DOF2  <--- --->GLK1(2) <---------TOE2(3)  ---------->DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->ARR11(3)   ctgagaaatagggtttaggaattgtgatcgtctaaaaagaagaagaagaagaagaagaagaagaagaagatcatggtctgatcaaagtagtttgatctct  17479700                                                   <------MYB46(1)                                                   <------MYB83                                             --------->AHL20(2)                                             <---------AHL20(2)         --------->ANAC46                        <---------WRKY38(1)  <---------YAB1<------ZmHOX2a(1)           <------ZmHOX2a(1)                        <---------WRKY12    --------->AHL20(2)        --------->ANAC46 ----------->GT1                      <-----------HVH21     <---------AHL20(2)  --------->AHL20(2)    <----------ID1        --------->HSFB2a(2)   --------->ARR11(3)  <---------TOE2(3)   --------->ZAT6  ----------->GT1        <---------HSFB2a(2)  <------ZmHOX2a(1)    --------->MYB59   <-----------GT1 --------->DAG2 ------At4g35610    --------->MYB59    <---------YAB1     ----------->GT1          ---------->DOF2   tctgatatatcgcgaagctaattgggtcaaaggattttgttttgattttaattaggttagaggaaaaaatatacactacatgacaaaaaggataaaaatg  17479800                                                  --------->HSFB2a(2)                                                  <---------HSFB2a(2) <---------MYB52(1)                                                  <---------HSFC1(1)  --------->At5g28300                        --------->AHL20(2)  <---------ALFIN1         --------->LBD16                       <---------AHL20(2)   --------->AtMYB61      <---------LBD16                      --------->AHL20(2) <---------ALFIN1        <---------SPL7               ----------->GT1           --------->AtMYB61      <------MYB83              ----------->GT1           --------->MYB46(3)      <---------MYB46(3)            ----------->GT1          ------->GAMYB--------->HSFC1(1) ----------->GT1    XXXXXXXXXXXXXXXXXXXX>MIR825   --------->MYB52(1)            <---------DEAR3(2)            <------ <---------GLK1(1)--------->AHL20(2)<---------MYB52(2)          <------MYB46(1)          <-----------GT1 --------->GLK1(1)<---------AHL20(2)--------->MYB46(3)        <---------MYB52(1)     <----------DOF2   tggaattctcaagaaggtgataaatttaaaatatgacaacggaccaccacttcgagaaaactacgttggtccggtaaatagcgactgcttttaaccttcg  17479900                  --------->ATHB12                  <---------ICU4      ---------->DOF2                  --------->YAB1    --------->ARR11(3)     <---------ANAC46               <---------ARR11(3)                           --------->At5g28300     <---------ANAC58              --------->YAB1                      <---------At4g35610     <---------ANAC58  <---------STY1(2)     <------ZmHOX2a(2)         --------->At4g35610---------->DOF2 ---LBD16        --------->ICU4 ---------->DOF2            <-----------GT1      ----------->GT1   gagacatgcttgtacatgaatgattagctagggataaagataatgcgatcgattgtatttttcacattttttcagcgtaaatcggtaatttctaaagagc  17480000                                                    <---------At1g77200               <---------AHL20(2)                   --------->ATERF1(2)               --------->AHL20(2)                   <---------ANAC46              <---------AHL20(2)                    --------->ETT(1)     --------->ANAC46              --------->AHL20(2)                   --------->RAP2.6(3)   --------->ANAC58     <------              <---------AHL20(1)                 --------->ALFIN1        --------->ANAC58    <-------              *TSS                 --------->AHL20(2)                ------>MYB83           <-------MYC3   --------->MYB52(1)              <---------AHL20(2)                ------>MYB46(1)        ------->MYC3  --------->TOE1(2)                --------->AHL20(1)                -------->P    <---------ARR11(3) <---------MYB52(2)                <---------AHL20(1) <------NtERF2  --------->SPL7--------->ARR11(3)   aaaacaaacgagacaatttttttaggggagaaactaaaatattaagagcgagtgtcggcaagttcagaccctaccacgaaaacaagataatacacatgtc  17480100                                                                <---------TGA1a                                                                <---------ANAC55(2)                                                                <---------O2                                                                --------->ANAC55(2)                                                  --------->LBD16        <---------At4g35610                                                  ------>NtERF2 --------->TGA1a                                                 <---------ETT(1)        --------->At4g35610                                                 --------->ANAC46  ------->TEIL                                           <---------ICU4       --------->ANAC55(1)             <----         <---------WOX13(1)              <-----------GT1    <-----------HVH21--------->YAB1     <----        <------------CBF----------------->AGL1   --------->LBD16--------->O2<---------YAB1      <----    ---------->DOF2--------->ANAC46 ----------->GT1<------NtERF2--------->ANAC58                <---- -----HVH21        --------->O2 --------->ATHB12<---------LBD16 <---------ANAC46       ------->TEIL ----RAV1(1)       <---------O2<---------AHL20(2)<---------LBD16--------->ANAC58--------->AHL20(2)   gcttaaaaaagattgatgtctacgtggccatatttgattagttaaacattcccggcaaactgagtcacgtatgtcagcatcataaaatgaatctaatgac  17480200                                     <---------TGA1a                                     --------->TGA1a                                     <---------O2                          --------->ARR14(2)                          ------->TEIL                          <---------ARR14(2)                       --------->O2  --------->O2                       <---------ANAC55(2)                       --------->ANAC55(2) <---------ANAC58                       --------->ANAC58    <---------ANAC46          ----------------------->TaNAC69(2)                               --------->ICU4       <---------ALFIN1--------->ANAC58    <---------ANAC58           <------MYB83 -----bZIP60(2)<---------ANAC58      <---------ANAC55(2)              <------MYB46(1) -----ANAC58   <---------ANAC58  <-----------HVH21                <---------HSFC1(2) -----ANAC46   <---------AtLEC2 <---------bZIP60(1)               --------->HSFC1(2)          <------ -----ANAC58   <---------ANAC46 --------->bZIP60(1)              --------->GLK1(2)       ----------->GT1   ttggagacaccacttgtgcgtggccacgtatttgatgtcacgtttgagtgtatttgtattttctgagaagcttggtagtgattttagcaaattgttatat  17480300                                                                                            ---------                                                                                            <--------                             --------->ANAC58                                               <--------               --------->YAB1--------->ANAC58                                               <--------   --------->At4g35610  <---------ICU4         <---------AHL20(2)                           <--------   <---------At4g35610  --------->YAB1   ----------->RAV1(1)                       <----------DOF2 ---CCA1(2)<----------DOF2----------->HVH21    --------->AHL20(2)           <---------TOE2(3)   ctgtctgctatgtcttttcatcacatttatgacgcattatcaacaacatataaattctttgaataccgataacacatataggttacttttgtatacgtgt  17480400                                                                               <---------DAG2                                                                            ------->GAMYB                                                                           <------------MYB.PH3(2)                                                                           <---------MYB111(2)                                                                           --------->MYB46(3)                                                                         --------->MYB52(1)                                                                        ------->GAMYB                                                                       <---------MYB111(2)     <---------YAB1                                                    <---------MYB46(2)   <---------AHL20(2)                                                  <---------MYB55(2)   --------->AHL20(2)                     --------->ARR14(2)           <---------MYB111(1)  --------->AHL20(2)        <---------ANAC58                           --------->MYB46(3) >ANAC55(2)                 <---------ANAC58                           <---------MYB52(2) -ANAC58                    <---------ANAC46 <---------ETT(1)        ------>MYB83 -ANAC55(2)        <------MYB83           <---------ARR14(2)       <---------MYB59 -ANAC58           ----------->GT1    --------->LBD16 <---------ZAT6 ------>MYB46(1) -ANAC55(1)        <------MYB46(1)   xxxxxxxxxxxxxxxx>smallRNA(i) --------->ANAC46   ttcatttatttttgtgaagctaggttaattgagtgtattccgagtttccgacaatagtcttaaactagacccaactaacaaccttttcccatggcccaat  17480500  Previous    Next  AGI:  At2g41870.1    Description:  remorin family protein. similar to remorin family protein [Arabidopsis thaliana] (TAIR:AT3G57540.1); similar to Remorin, C-terminal region [Medicago truncatula] (GB:ABN08208.1); contains InterPro domain Remorin, C-terminal region (InterPro:IPR005516) Range:  from: 17477944    to: 17480014    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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