Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->KAN4(2)           <---------HSFB2a(1)           --------->HSFB2a(1)           <---------HSFC1(2)           --------->HSFC1(2)                            --------->LBD16       --------->LBD16                              <---------GLK1(1)      --------->LBD16                               --------->GLK1(1)      <---------HSFB2a(2)                       --------->LBD16      --------->HSFB2a(2)                      <---------LBD16                                      <  <---------ARR14(2)                        <---------ALFIN1                                       <-  --------->GLK1(1)                        --------->ZAT14                                         --  --------->ARR14(2)                       --------->ETT(2)                                       <--  <---------GLK1(1)                        <---------ZAT14         --------->GLK1(1)--------->DREB2C(2) <---------GLK1(1)                         <---------ETT(2)   <---------At4g35610   --------->DEAR3(1) ------HSFB2a(2)                        ------->GAMYB   --------->DEAR3(1)        --------->MYB52(1)- ----->HSFB2a(2)                      --------->At4g35610------>NtERF2          --------->MYB46(3)<-- -GT1<---------LBD16       <---------MYB46(3) <---------LBD16 ----------->RAV1(2)--------->AtMYB61<--   tgggaatcccggaaaattctcaacttcagtagttgtcatcaactgtccaccgggaactccgcccatctgatacccttcaaaaaccaccggcttcaaattg  17385700                                  --------->ARR14(2)                                  <---------PCF2                                  <---------ARR14(2)                                 ----------->HVH21                                 --------->ATERF1(1)                                 <---------SPL7                           --------->DEAR3(2)                   <------NtERF2<---------ATERF1(1)                                             -----                  <---------ATERF1(1)                                                          ------                  --------->ABI4(1)                                                     <---------AHL20(2)                  ------>NtERF2 ------>NtERF2                                           --------->AHL20(2)                 <---------DEAR3(1)                                                    --------->AHL20(2)                 --------->RAP2.3(2)                                                  <---------YAB1                 --------->DEAR3(1)                                                 --------->YAB1          <---------ARR14(2)------->GAMYB                                           <---------AHL20(2)   <---------At4g35610     <---------LBD16                                          <--------HAHB4   --------->At4g35610   <-----------GT1                                            -------->HAHB4  <---------DEAR3(1)<---------ANAC46                                                -------->ATHB1 ------->PIF4    --------->RRTF1(3)                                                 --------->ATHB51 <-------PIF4    --------->RAP2.3(3)                                                <---------ICU4 --------->ZAT18 --------->ANAC46<------NtERF2                                     <---------YAB1---- ------NtERF2   --------->ATERF1(1)               <---------ICU4                   --------->ICU4---- --------ZAT18  --------->ERF1<---------LBD16  --------->YAB1                   --------->AHL20(2) ---->NtERF2    --------->ORA47(2)<---------PCF5  --------->ZAT6                <---------AHL20(2) -------ANAC58  --------->RAP2.3(1)      ------>NtERF2                          --------->AHL20(1) -------->ATERF1(1)--------->RAP2.3(1)--------->LBD16       <---------HSFB2a(2) <---------AHL20(1) -------ANAC46  --------->DEAR4(2)--------->TCP15(1)  --------->ZAT14   ----------->RAV1(2)   ------- -------ANAC58 <---------RAP2.3(1)--------->TCP20 <-----------GT1 --------->GLK1(2)<---------ATHB51   gcgcgcgctgcatatatcgccgccgtataaccggcgggaccggagcctataatcactacattctcgataatctcgcctgcaattaattattaaaaaacca  17385800                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                    <---------GLK1(1)                            ----                                                    --------->GLK1(1)                           <----    --------->ZAT2                                 <---------ARR14(2)                           <----    <---------ZAT2                          ---------->DOF2                                     <---- ------>RAV1(1)                          --------->ANAC58      ------->TEIL          ----------->GT1< --->AtMYB61                             --------->ANAC58------>ZmHOX2a(1)   >>>>>>>>>TBF1     <----- -->MYB46(1)                  --------->TOE2(3)    <-----------ARR10      >>>>>>>>>TBF1        <----- -->MYB83                     --------->TOE1(3)   <------ZmHOX2a(1)----------->RAV1(2)         <----- -->MYB46(3)     --------->ZAT6     ---------->DOF2--------->ARR14(2)------>ZmHOX2a(1)         <-----   acacagagctcgattacttacactgccaaaaaccttaagaaagaagcaaagaggaactcctcaagtacctcctgaagaagaagaagacggagaattggcg  17385900                                                                               --------->ALFIN1                                                                           ==========================                                                                           <---------ANAC58                                                                           <---------ANAC46                                                                           <---------ANAC55(2)                                                                           --------->ANAC55(2)                                                                           --------->O2                                                                           <---------bZIP60(2)                                                                           <---------TGA1a                                                                           <---------O2                                                                           --------->TGA1a                                                                           <---------ANAC58                                                                        ----------->TGA1                                                                        ----------->HVH21                                                                        <---------MYB52(1)                                                                       <-----------HVH21                                                                      <---------TGA1a                                                                      --------->TGA1a                                                                      <---------O2                                                                      --------->O2                                                                      ===============================                                                                     <------NtERF2       --------->GLK1(2)                                            <---------RAP2.6(3)    <---------ARR14(2)                                             --------->RAP2.6(2)    --------->ARR14(2)                                             --------->RAP2.3(2)   <------NtERF2                                                   --------->RAP2.3(3)   --------->ATERF1(1)                                             --------->RRTF1(3)  --------->LBD16                                                 --------->DEAR4(2) <---------ANAC58                                 <---------LBD16 --------->RRTF1(1) <---------ANAC58                                <---------WRKY18(1)------>NtERF2 <---------ANAC46                                --------->MYB52(1)--------->DEAR3(1) -------->ATERF1(1)                             --------->WRKY12  --------->DEAR3(2) ------NtERF2                                   ----------->HVH21 --------->RAP2.3(1) --------MYB46(3)                              <---------WOX13(1) --------->ERF1 ---->NtERF2                                  ==================================MYC_MYB -------DEAR3(1)                              <-------GAMYB       --------->ATERF1(1) -------AtMYB61                               <---------ANAC58    <------NtERF2<---------AtMYB61 -------->HVH21                               =======================================MYC_MYB ------>ALFIN1                               --------->MYB55(2)   --------->ORA47(2) ----GAMYB                                   <------MYB83         --------->RAP2.6(1) ---NtERF2                                   <------MYB46(1)      <---------ABI4(2) ------ABI4(1)                               --------->MYB52(2)   --------->MYB46(3) ----->ATERF1(1)                             <---------MYB46(3)  <---------ATERF1(1) -----RAP2.3(1)                             <---------AtMYB61    --------->At4g35610 -----ATERF1(1)            --------->At4g35610<---------ANAC58  <---------ARR14(2) -----MYB46(3)           --------->YAB1     <---------MYB46(3)  --------->ARR14(2) ---------LBD16  <------NtERF2             ==========================================MYC_MYB ----DEAR3(1)  --------->ALFIN1            <--------P   <------ZmHOX2a(1)  <---------ANAC55(1) ----DREB2C(2) <---------DEAR3(1)          =====================================MYC_MYB ----RAP2.6(2) <---------ANAC46           <---------MYB52(1)--------->CCA1(2)--------->ALFIN1     --- ----ANAC46   <---------LBD16---------->DOF2--------->MYB111(1)<------ZmHOX2a(1)              <------   gtggcggagactctgaggcggagggaatcagaagagcgagttcgggttggttgacggaggagataggagccgccgtgacgtgtggtagtagtagtagtga  17386000                                                 <-----------HVH21                                          ----------->ARR10                                          ----------->HVH21                                         <------NtERF2                                        --------->LBD16                                        <---------ATERF1(1)                                       <---------ANAC46                                       <---------DEAR3(1)                                      <---------ABI4(1)                                      <------NtERF2                                      <---------LBD16                                      --------->ATERF1(1)                                      --------->At4g35610                                     <---------RAP2.6(1)                                     ------>NtERF2--------->ALFIN1                                     <---------RRTF1(1)                                     <---------DEAR4(2)                                     <---------ATERF1(1)                                     <---------ERF1                                     <---------ORA47(2)                                     <---------RAP2.3(1)                                    <---------RAP2.3(3)                                    <---------DREB2C(2)                                    <---------RAP2.6(2)                                    <---------RRTF1(2)                                            ---                                    <---------DEAR3(1)                                           ----                                    <---------ATERF1(2)                                       -------                                    --------->ATERF1(2)                                       -------               <------ZmHOX2a(1)    <---------RAP2.3(2)                                       -------      --------->CCA1(2)---------->DOF2<---------At4g35610                       ----------------->AGL1 ========bZIP_DOF    ---------->DOF2<---------RRTF1(3)              <------NtERF2 <---------CCA1(2) ========bZIP_DOF <------ZmHOX2a(1) --------->ALFIN1               --------->ANAC58<---------ARR14(2) ------->DOF2--------->ALFIN1      <---------ABI4(1)               --------->ANAC58--------->ARR14(2) ---ZAT6    <------ZmHOX2a(1)      --------->ATERF1(1)      ----------->HVH21  ------>NtERF2<--------   gaaagaagagatgaggaggaggagaaagagcggatgaggcggcggagacacggtgaggcgatgagacggaggcaataccgatgcctatcttgggagacgc  17386100                                                                                             --------                                                                                             <-------                       --------->TOE1(3)                                                    <------NtERF2                       --------->TOE2(3)                                                 <---------MYB52(1)                      ----------------->AGL1                                            =============                  <---------DAG2                                                        <-------GAMYB      <---------AHL20(2)<----------DOF2                                                <-----------RAV1(1) --->NtERF2   <---------WOX13(1)                                                  =================== ----->RAP2.3(3) --------------->AtSPL3                 <----------DOF2           <----------DOF2 -->ANAC58   <---------ANAC58                          <---------ANAC58          <---------GLK1(2) -->ANAC46   <---------ANAC58                     <----------DOF2                --------->ARR14(2) -->ANAC58  --------->ATHB12              <------------CBF   ----------->GT1     <---------ARR14(2) -ATERF1(1)<---------YAB1        *TSS  ------------>CBF<---------ANAC58        --------->LBD16------>NtERF2   agccatattttttttgattgccttacctttaccagagaccatacaattgtctctttggctttgcagttaaaaaaaaacatcccgattttctgttggcgac  17386200          <------NtERF2        --------->ANAC46        --------->ANAC58        --------->ANAC58      --------->ANAC46      --------->ANAC58      --------->ANAC58      --------->TGA1a      <---------TGA1a      ==============================bZIP_DOF    <---------ALFIN1   ----------->HVH21                  --------->ZAT18                         <---------REM1(1) ->ETT(2)------>NtERF2       <---------ANAC58                        <---------GLK1(1)        ------- --RAP2.6(2)        <---------ARR11(3)<---------ZAT14           <---------MYB52(1)       --------->MYB52(1) ===============MYC_MYB      <---------ANAC58                 <---------MYB46(3)        <---------ZAT14 ===============bZIP_DOF <----------DOF2                    <---------At4g35610        ----------->HVH21   tgtgcctcacgcgcctcagcattatctctttgcttccaagtccacaggcttagatgattttcagccgttggatatatgtgatgaagcgactgaacggtgg  17386300                                                                           ------>ZmHOX2a(2)                                                     <----------DOF2      <------ZmHOX2a(2)       ---                                                     <---------DAG2      --------->ARR11(3)       <--                          <----------DOF2  --------->ANAC58              <---------ARR11(3)      ----                 <-----------GT1           --------->ANAC58            <---------HSFB2a(1)     <----- -->ALFIN1<---------WOX13(1)      ------->GAMYB  <---------ATHB12    ---------->DOF2       --------->ZAT18   agatgtgttttgactgattttacttcgtcttttcaacggagggataagccaatcgctttttttttaagtgggaaagatcgccaagagtttaagtggacgg  17386400                                                                            <---------LBD16                                                                           ------>MYB46(1)                                                                           ------>MYB83                                                                           -------->P                                                                           --------->MYB52(1)                                                                          <---------ALFIN1                                                                          --------->MYB55(1)                                                                         --------->MYB46(3)                                                                         <---------MYB55(2)                                                                  --------->TOE2(3)                                                                --------->GLK1(2)                                                               <---------ARR11(3)                                                               --------->ARR14(2)                                   <---------------AtSPL8      <---------ARR14(2)                                   <---------------AtSPL3      --------->ARR11(3)    <---------DAG2          <-----------------AGL1             <---------GLK1(2)    <----------DOF2         <-----------------AG              --------->HSFC1(2) -------->HVH21  =============================MADS_MADS       <---------HSFB2a(1)                  <- -------DEAR3(1) ----------------->AGL2                       --------->HSFB2a(1)                  <- ----->SPL7      <-----------------AGL3                       <---------HSFC1(2)           --------->GLK1(2) ----SPL7<---------AHL20(2) ----------------->AGL1           ----------->ARR10--------->LBD16     ---   acgacgctttttatattgggccataaatgggcctgttttggtactgaatatttagtcacgacgaagattcttaaacccaccggaaaatgggctaatctgt  17386500                                      ---------->DOF2                                  --------->AHL20(2)                                  <---------AHL20(2)                               <---------AHL20(2)                               --------->AHL20(2)                               <---------ICU4                              <---------ATHB51       <---------ANAC58       --------->ICU4       <---------ANAC58       <---------ATHB12    <---------WOX13(1)      --------->YAB1--------->YAB1   <---------ARR14(2)--------------->AtSPL8 --------LBD16   --------->DAG2<--------ATHB1 --------At4g35610   <---------------AtSPL8 ------>ALFIN1  ---------->DOF2--------->ATHB51   gtgcggattgcttcgccaaaaagttagtactaataatttataaagcataactagctaaatgcgaagactatatagtttacttagttctgaagaggttgaa  17386600  Previous    Next  AGI:  At2g41680.1    Description:  thioredoxin reductase, putative / NADPH-dependent thioredoxin reductase, putative. similar to NTRA (NADPH-dependent thioredoxin reductase 2) [Arabidopsis thaliana] (TAIR:AT2G17420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23607.1); similar to NADP-thioredoxin reductase C [Medicago truncatula] (GB:ABH10139.1); similar to NADP-thioredoxin reductase C precursor [Hordeum vulgare] (GB:ABY61747.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains Int Range:  from: 17383233    to: 17386133    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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