Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->LBD16                                                     <---------LBD16                                                  <----------DOF2                                                  <---------GLK1(1)                                                 <---------ANAC58                                                 <---------ANAC58                                          --------->AHL20(1)                                          <---------AHL20(1)                                          --------->ARR14(3)                                          <-----------ARR10                                          <---------ARR14(3)                             <---------ARR14(2)                                          --------->ARR11(3)                        --------->HSFB2a(2)             ----------->RAV1(2)          <---------ARR14(2)                        <---------HSFB2a(2)   <---------ALFIN1                       --------->ARR14(2)                 <---------GLK1(1) -------->AtMYB61                         <---------ARR11(3)<---------ARR14(2)      ------>ZmHOX2a(1)   gaccacaaccttctcgcctgaatcaaactgtctcttcagaacaatatcttggctttccggtgaatcccaatccaatttgaaatctcctagagaaccggtc  17353400              <-------TEIL                                                   --------->CCA1(2)           <---------ANAC46                                                  <------ZmHOX2a(2)        --------->ALFIN1        --------->YAB1                              <---------ARR11(3)      <-----------RAV1(1)     <---------ARR11(3)                            --------->ARR11(3)<------  ------->GAMYB         --------->ANAC58        --------------->AtSPL8      --------->AGP1    <------ --------->ANAC58       --------->ANAC58        <---------------AtSPL8     --------->GLK1(1)  ------- --------->ANAC58--------->ANAC58   --------->DAG2              <---------TOE1(2)  --------->TOE2(3) --------->DEAR3(1)   ---------->DOF2<---------TOE2(3)         =====================HOX2a_HOX2a --------->ANAC46--------->ANAC58  ---------->DOF2             ------>ZmHOX2a(1)----------->RAV1(1)   tcaacgccctgtggggttcaagcacaaagcaaaatcataaaggtagaatgtaagtacttaaaatcctagggtttatgagatccaacatcaaattcaaatt  17353500                                                                                          --------->ARR11(3)      ----------->GT1                                              ------>ZmHOX2a(2)      <---------ARR11(3) ---GLK1(2)                                                <---------GLK1(2)         --------->ATHB12 ---ARR14(2)            <-------TEIL                  --------->MYB52(1)           ----------->RAV1(1) -->ARR14(2)        <---------TOE2(3)                ----------->HVH21    <---------TOE2(3) ------>ZmHOX2a(2)   cgcccatctggtaaatcactctaatgttcatcaattcagaaaaatgaaattgaaactgacagagtctgatcgaactaatgttgagcaccattgatcttaa  17353600                                                                                       ----------->HVH21                                                                                       ----------->TGA1                                                                                     <---------ANAC58                                                                                     <---------ANAC46                                                                                     --------->ANAC55(2)                                        ---------->DOF2       <---------LBD16        <---------ANAC58                                 >>>>>>>>>TBF1               ----------->RAV1(2)     <---------ANAC55(2)                              >>>>>>>>>TBF1                <-----------GT1       --------->ARR11(3) <                       --------->MYB52(1)     <------ZmHOX2a(1)          <------ZmHOX2a(1)   ------->TEIL   aactcaattgagagattactgagagcaacgaagaagaagaaggaaagaggaagacaacaatttacctggaaacgaggatgggagatttcgtgacgaattt  17353700                     <-----------GT1          ------>ZmHOX2a(2)         <------ZmHOX2a(2)        <-----------ARR10        --------->ARR11(3)        <---------ARR11(3)        --------->ARR14(3)        <---------ARR14(3)                            <---------At4g35610        --------->GLK1(2)                           <---------HSFB2a(2)        --------->ARR14(2)                          --------->HSFB2a(2)    <---------CCA1(2)        <---------ARR14(2)                --------->ANAC46              ------>ZmHOX2a(1)          <-       <------ZmHOX2a(1)                  --------->ANAC58   <---------ARR14(2)          <----------- ----------DOF2 --------->MYB46(3)        --------->ANAC58   --------->ARR14(2)    <----------DOF2 <-   cactttggaggatcttcaacaaatcaccattttcaatagccttcaagcctcgtttcagaagcggattcaacttcctcatctctctcttttccctaaaatt  17353800                                                       ----------->GT1                                                       <------MYB83                                                       <------MYB46(1)                                                      --------->MYB59                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                               --------->ARR14(1)                                              <---------ARR14(2)                                          <---------ICU4                                  --------->ZAT14                                          --------->YAB1                    --------->LBD16                                         <---------ATHB12                  <---------ANAC58                                 --------->ZAT14    <---------MYB52(1)     --------->ANAC55(2)             --------->ANAC46    <---------ZAT14<---------LBD16            <---------ANAC58  <------- --------ANAC58                  --------->ZAT18------>ZmHOX2a(2)         <---------LBD16 <---------ZAT14 ------AGL3 <---------LBD16  <---------TOE2(3)--------->ARR14(2) ----------->GT1        <---------At4g35610 --------ANAC58*TSS         ---------->DOF2 <---------YAB1 <---------AHL20(2)  ------------>CBF------   ggcttctctcaatctacggagcacaaaaactaaagtagactgaatcatgatccggttcggtttaattcggtttatttccgtagcaatttcagtagaccgg  17353900                                    --------->ANAC58                              <---------MYB111(2)                                  <---------ICU4                                 --------->ANAC58                                 --------->ICU4                                  --------->ANAC58                                 <---------ATHB12                                --------->ANAC46                            <---------ANAC58                                --------->At4g35610                            --------->ANAC55(1)                          <---------ZAT2                            <---------ANAC46                             --------->At4g35610                            <---------ANAC58                             <---------At4g35610                            --------->ANAC58                        <---------ICU4--------->AtMYB61                            --------->ANAC58                        --------->YAB1<---------MYB46(2)                            <---------ANAC55(2)                    <---------ATHB12 ------>MYB46(1)                 <---------ARR14(2) --------->ANAC58             --------->WOX13(1) ------>MYB83       --------->At5g28300  --------->ANAC55(2)                <---------ATHB12--------->ANAC46      ----------->GT1       <---------ANAC55(1)<---------ICU4 ------>MYB83  --------->ZAT14   ------------>MYB.PH3(1) --------->MYB59--------->AHL20(2)  ------>MYB46(1)  --------->ANAC58 <---------AHL20(2)      <---------MYB52(1) <-----------GT1  --------->WOX13(1)--------->ANAC58 --LBD16         <---------GLK1(2)--------->YAB1           --------->MYB46(3)<---------ALFIN1<------- --->LBD16       --------->ARR14(2) --------->AtLEC2  --------->ANAC46   --------->ZAT2<----------DOF2   aatttaaacggttaaaccgaattctcagttacgtaatcatgcaatttaacaattacacagaaccaatcaatcatcagctgcacaccaaacttttatttcc  17354000     <------ZmHOX2a(2)                  ----------->GT1    <---------ARR11(3)              ---------->DOF2                                   <---------GLK1(1)    --------->ARR11(3)           --------->AtLEC2                              <---------GLK1(1)    < ----GT1                      <-------TEIL              --------->YAB1  <---------YAB1--------->GLK1(1)   cttgaagatcaaggcttctctcaatacatagtttcattcaaagggtgattttttgtattaataaacaaaaaatgaagatagaattcagatttcagataga  17354100                                                                              <---------ALFIN1                                                                       ----------->HVH21                                                                      <-----------HVH21                                                                      <-----------TGA1                                                                     --------->ANAC55(1)                                                                     --------->ANAC55(2)                                                                     --------->ANAC58                                                                     --------->ANAC46                                                                     --------->ANAC58                                                                     <---------ANAC55(2)                                                                     <---------TGA2(1)                                                                     <---------TGA1a                                                                     --------->bZIP60(2)                                                                     --------->O2                                                                     --------->TGA2(1)                                                                     --------->TGA1a                                                                     <---------O2                                                                     <---------bZIP60(1)                                                                    <-----------STF1                                                                <---------bZIP60(1)                                                                --------->bZIP60(1)                                                                <---------TGA2(1)                                                             <---------YAB1 --------->ANAC58                                                    -------->P  --------->TGA2(1)                                                    ===========================MYC_MYB                                                   <-----------GT1 <-----------GT1                                                --------->GLK1(2)<-----------HVH21  ------>ZmHOX2a(1)                                   ------------>CBF--------->WOX13(1)--------->bZIP60(1)                    --------->ANAC46         XXXXXXXXXXXXXXXXXXX>MIR3434*   --------->ANAC58                    --------->ANAC58     ---------->DOF2   --------->YAB1   <---------ALFIN1      --- -------TEIL        --------->ANAC58     ======================================bZIP_DOF  <-----------GT1   gtttcattatccattttagttcaagcatctataaccagacaatgaaagagaatcaaccatatgatgatgtcacgtcacacacactccttataaactatat  17354200           ==========================HOX2a_HOX2a           <------ZmHOX2a(1)                                                           ---------->DOF2         <---------TOE1(3)                                                       <---------YAB1         <---------TOE2(3)                           <---------ATHB51        <---------GLK1(2)  <---------At4g35610              *TSS   <----------ID1<---------YAB1       <---------ARR14(2) ------>ALFIN1                <------ZmHOX2a(2)      --------->ICU4          --------->ARR14(2)   gtgtagcttctaaggaaaccaaaaacatatagatcaaaacaaaaaaaacaaacaaattatgaattcagaatgggaaatggattctgatagaaagaaaaca  17354300  Previous    Next  AGI:  At2g41600.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN74374.1); contains InterPro domain Mitochondrial glycoprotein; (InterPro:IPR003428) Range:  from: 17352514    to: 17353815    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g41610.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO24352.1) Range:  from: 17354235    to: 17355317    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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