Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------MYB46(3)                                                                                 <---------ANAC46                                                                                 --------->ALFIN1                                                                               --------->MYB55(2)                                                                               <------MYB46(1)                                                                               <---------MYB46(3)                                                                               <------MYB83                                                                              --------->ALFIN1                  <------ZmHOX2a(2)                                           <---------DEAR3(1)       <---------ARR11(3) --------->AtLEC2                                    --------->MYB111(2)     --------->ANAC58--------->ANAC55(2)            ------>ZmHOX2a(2)         <---------AtMYB61     --------->ANAC58<---------ANAC55(2)      --------->YAB1          <---------ZAT14 -AHL20(2)      <------ZmHOX2a(1)          --------->YAB1             --------->REM1(2) >AHL20(2)----------->HVH21               <---------ATHB12            --------->ZAT14    <---------GLK1(2)   atactgcaagaactgacaggatcaagtgatgcaaaatggtcccaataagcatgatccaatagagtttaccagtgtagagggtggtgggcaagattgtctt  17321200                                                                                                 <---                                                                                                 <---                                                                                                -----                                             --------->ZAT18                               --------->ANAC58                                             <---------ZAT18                               --------->ANAC58                                             <---------ZAT14                               ----------                                         --------->STY1(1)                                 --------->ANAC55(1)                                         <---------STY1(1)                                 --------->ANAC55(2)                                     --------->ZAT18                                       <---------ANAC55(2)                                     ------>NtERF2                                     --------->YAB1                          --------->ANAC58   --------->ZAT14                        --------->YAB1                          --------->ANAC58  <---------ZAT6                          <---------ICU4         <---------At4g35610       --------->ATERF1(1)                            --------->AHL20(2)         --------->At4g35610    --------->ALFIN1       ----------->HVH21 ---------->DOF2   --------->ANAC46   ctcttaaactgagctcaagtaccatgagacccaagtaggggccctagtgtacatgctctgacaataaacttagccaaaagacaaaataataacaagtaat  17321300                                                                                         --------->YAB1                                                                                         --------->TOE2(3)                                                                                       ------>MYB46(1)                                                                       ----------->GT1 -------->P                                                                   --------->LBD16   --------->TOE1(2)                                                                  --------->ANAC46   <---------MYB111(1)     ----------->GT1                  <---------ARR11(3)         <---------LBD16     <---------MYB59 ------ICU4            --------->ANAC55(2)     <------NtERF2     --------->TOE1(2) -------->P --------GT1         <-----------GT1  --------->ARR11(3)        XXXXXXXXXXXXXXXXXXXX>MIR2111A* ---->ICU4   ---------->DOF2      --------->At5g28300          ------->TEIL   <-----------GT1  ------ ->GT1--------->At5g28300        ----------->GT1           ------->TEIL<---------ANAC46------>MYB83   aactatgcagtaaaataaagtttttacctattatgcagtaaatcttggcagggagagaatgtatgtacccgcgatgtgaattactaacctaccataaaaa  17321400                                                                                      --------->YAB1                                                                                      --------->TOE2(3)                                                                                   --------->CCA1(1)                                                                                   <---------RVE1(1)                                                                                   --------->GLK1(1)                                                                         <-----------TGA1                                                                         <-----------HVH21                                                                        --------->bZIP60(2)                                                                        --------->ANAC46                                                              <---------AHL20(2)   <---------GLK1(1)                                                              --------->AHL20(2)   <---------CCA1(1)                                                              --------->AHL20(1)   --------->RVE1(1)                                                             --------->AHL20(2)   --------->ARR11(3)                                              --------->AHL20(2)  --------->AHL20(2)--------->ARR11(3)                                        --------->ZAT6    <---------ARR11(3)      <---------ARR11(3)                                   <----------DOF2        --------->AHL20(2)  ---------->DOF2                            --------->HSFB2a(2)         --------->ANAC58--------->ANAC58                            <---------HSFB2a(2)<---------AHL20(2) <---------AHL20(2)<---------ARR11(3) ---->DOF2             <----------DOF2  --------->ANAC46--------->ANAC58--------->ANAC58   agatgagaaatagaagttagaaatacttttctagtaactttcacactatataatatgcaagaaattaattaaaaacgtcacaaagatatcttaatttgca  17321500                                                          ------>NtERF2                                                         --------->DEAR3(1)                    --------->ANAC58                    --------->DEAR3(2)                    --------->ANAC58                   ------->TEIL                   --------->WOX13(1)                  --------->SPL7      ----------->TBP                 ------------>CBF                    --------->ZAT14       --------->AHL20(2)             --------->MYB52(1)    <---------ZAT18   <---------ZAT14    --------->TOE2(3)      <-----         --------->DAG2            --------->ZAT18   <---------SPL7<---------DAG2    <----------DOF2        ---------->DOF2            --------->ZAT14 --------------->AtSPL8<----------DOF2 <-----------GT1   gcaagagacaaaaagtaatggcaatccagctatatagtgaacacaagtatatgactgtaccgcctaaaacctttcctttaaattcccctttctacctctt  17321600                            --------->TOE2(3)                            --------->TOE1(3)                   <---------ZAT18               --------------->AtSPL8               <---------------AtSPL8              <---------ZAT14                                 ------>NtERF2    <-----------GT1--------->ZAT18                            --------->LBD16 -----DOF2*TSS--------->ZAT14          --------->ZAT6<-----------GT1                       ----------   tttttttttccctcagagtagtactctaaacctcaagtttacctctacttctcttataccattccgcctcttattctttgcaatttctctcaacaaagta  17321700                                                                  --------->ARR11(3)                                                                  <---------ARR11(3)                                                           --------->YAB1                                                         <---------ARR14(2)                                                         --------->ARR14(2)                                                         --------->GLK1(2)                   --------->MYB52(1)                   <---------GLK1(2)                  ------>ZmHOX2a(1)                  --------->ANAC46                <---------ICU4                      ------>ZmHOX2a(1)          <---------At4g35610  -        <-----------GT1 --------->ARR14(2)          <---------LBD16            --------->At4g35610  -        <---------WRKY18(1)           <----------ID1--------->LBD16 ------>ZmHOX2a(2)            ---- >DOF2<---------WOX13(1)<---------ARR14(2)          =======================HOX2a_HOX2a  <-----------RAV1(2)   gaaatgggattgacctcatccttacggttccatagacaaaacaacaagactttcctcggaatcttcatgatcttggttctaagctgtataccaggtagaa  17321800                                                                --------------->AtSPL8                                                             <---------GLK1(1)                                                             --------->GLK1(1)              --------->YAB1                                <---------ARR14(2)              <---------ICU4                                <---------ARR11(3)              -------->ATHB1                                <---------GLK1(2)          <---------GLK1(2)           --------->WOX13(1)                               --------->ARR11(3)         <---------ARR14(2)       ---------->ID1                                       --------->ARR14(2)         --------->ARR14(2) <---------ATHB12     --------------->AtSPL8           <-----------HVH21         <-----------GT1 ----->MYB83 <---------ATHB12   ---------->DOF2    --------->ARR14(2)            --------->ZAT6 <---- ----->MYB46(1)      <---------MYB52(1)<-----------GT1 ------>ZmHOX2a(1)<---------ICU4 --------->ARR11(1) ----->MYB46(3)    <---------YAB1   <---------ICU4 <---------ARR14(2)  ------>ZmHOX2a(1)       ------   ccaatctttgttccaatcattctgttagtaccccaaaagaattaccttcttcaaatccttcagatattcgttcctcattagtttcactagatttggaggg  17321900                                                           --------------->AGL15                                                           <---------------AGL15                                                           <---------ALFIN1                                                          <-----------------AG                                                          <-----------------AGL1                                                 --------->CCA1(2)                                --------->ANAC58--------->ARR14(2)                  --------->ZAT18           <---------At4g35610<----------DOF2     --------->HSFC1(2)         --------->ANAC58<---------ARR14(2)     <---------HSFC1(2) <-----------RAV1(1)----------->RAV1(1)<---------DAG2 ---GAMYB         <---------ETT(2)<------ZmHOX2a(1)       ----------------->AGL1    <-----------HVH21 ----->GT1 <---------------------WRI1<----------DOF2     <---------At5g28300--------->REM1(1)   ttatataagcttcgacgatgtccacaatgtggccaaggactttggcaacagataccagttaccacctttggcaattctacatccaaggtcagtttttgat  17322000                                          <---------CCA1(2)                                      --------->TOE2(3)                                     --------->ANAC46                                   <---------ALFIN1                                 <---------ATERF1(1)                                     --------->ANAC58                                <---------TCP20          --------->At4g35610         <------ZmHOX2a(1)          <---------REM1(1)     --------->PCF2           --------->ZAT2        <----------DOF2  <----        --------->YAB1    ----------->RAV1(2)    --------->ZAT6       <-----------HVH21  --------->ANAC58   atttcatcgatgatgaagcatatagtacatctgggctccacctcaaatcttacagtagcagctagaggccatggtcactcgcttcaaggacaagctctag  17322100  Previous    Next  AGI:  At2g41510.1    Description:  ATCKX1/CKX1 (CYTOKININ OXIDASE/DEHYDROGENASE 1); cytokinin dehydrogenase. Identical to Cytokinin dehydrogenase 1 precursor (CKX1) [Arabidopsis Thaliana] (GB:O22213); similar to ATCKX6/ATCKX7/CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6), cytokinin dehydrogenase [Arabidopsis thaliana] (TAIR:AT3G63440.1); similar to hypothetical protein OsI_019040 [Oryza sativa (indica cultivar-group)] (GB:EAY97807.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40733.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23642.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, Range:  from: 17321610    to: 17324081    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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