Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------MYB46(3) <---------MYB52(1) <-----------HVH21 -------LBD16                                ------>ZmHOX2a(2) ---->AtMYB61                              <---------ARR14(2) ---->DEAR3(1)                             --------->ARR14(2) -----ALFIN1                   <---------At4g35610                         ----------->GT1 ----ZAT2 --------->ZAT14     <-----------RAV1(1)                        ------->MYC3               - --->ZAT2 --------->ZAT18     <---------MYB46(3)                         <-------MYC3    --------->ARR11(3) --ALFIN1 <---------ZAT18   ----------->RAV1(2)                     ------>ZmHOX2a(2)    <---------ARR11(3) -------->AGL1        --------->SPL7<----------DOF2    --------->At4g35610--------->ALFIN1  <--------   tccggtcgctagtgctccccatcgtactacgtctggtgctatctggatcgcgagaacagcacaaacttgatcccatgtggttcaaaactaaaatctttga  17238000                 --------->ANAC58                 --------->ANAC58                <-------TEIL                                             <---------ZAT6               --------->ARR14(1)                                        <-----------RAV1(1)              --------->ARR14(2)                                       <---------ANAC46    ------->TEIL              <---------ARR14(2)                                  <------MYB46(1)       --------->ANAC55(2)              --------->ARR11(1)                                  <---------MYB46(3)    <---------ANAC55(2)      --------->ICU4                                              <------MYB83     ------>MYB83------ --------->DOF2--------->CCA1(2)                                 <---------AtMYB61 ------>MYB46(1) --DOF2-------->ATHB1                                           <--------P       <---------MYB59   tgaaaagaattattcagatacgaaaatagatgaaagtttaagaacaaatgagatagagacagaagggttggtttagtgttggaccaaattatgtatttgc  17238100                                                              --------->O2                                                              <---------bZIP60(2)                                                              --------->TGA1a                                                              <---------O2                                                              >>>>>>>>>>HY5                                                              <---------TGA1a                                                              --------->TGA2(1)                                                              <---------bZIP60(1)                                                              --------->bZIP60(1)                                                              <---------TGA2(1)                                                              <---------ANAC55(2)                                                              <---------ANAC46                                                             ----------->STF1                                                             <-----------STF1                                                           ----------->TGA1                      ----                                                           ----------->HVH21                 <-------                                                         --------->ALFIN1                   <--------      --------->ATHB12                                   <---------ZAT6                     <--------     --------->ICU4                                    <---------ANAC58                     ---------     <---------YAB1                                    <---------ANAC46                ------------>CBF   <---------ICU4          <---------ANAC58            <---------ANAC58               <-----------GT1  --------->ICU4           <---------ANAC58       <------------CBF               --------->AHL20(2)  <---------AHL20(2)     <-----------GT1        <---------AHL20(1)               --------->AHL20(1)  <---------ATHB51   --------->AHL20(2)         --------->ARR11(3)               <---------AHL20(2)  --------->AHL20(2) <---------AHL20(2)         --------->AHL20(1)          ------------>CBF--------- --->At4g35610 *TSS  --------->AHL20(1)      --------->AHL20(2) ------------>CBF <---------AHL20(1)--   tgaaataattagtggttttgaaattttttgcttcacattttatacataaaaatattggagtgtgacgtcaataaacaaaacaatttattaacaatttatt  17238200         <---------ATHB12         --------->ICU4    --------->ANAC46    --------->ANAC55(2)    --------->ANAC58    --------->ANAC58    <---------ANAC55(2)  --------->YAB1 <---------ATHB12 -------->CBF --AHL20(2)                        <---------TOE2(2) -AHL20(2)                 --------->YAB1 -AHL20(1)             <---------YAB1        <----------DOF2                            <---------AHL20(2) >AHL20(1)          --------->ICU4 <---------TOE1(2)                          <---------YAB1 >AHL20(2)<---------ICU4  <---------YAB1  --------->ZAT6           <-----------GT1      --------->AHL20(2) ------->WOX13(1)<---------YAB1 <-----------GT1            --------->ANAC46 --------->CCA1(2)    <---   tcaatcacgaaatcattttgtcattactatcatttcacaggttaacacttttaatgcttccaaaccatttaacaaatgatatgagagcattaaaattttg  17238300                                                            <----------DOF2                                                 ------>MYB83                                 <---------YAB1  ------>MYB46(1)     ----------->GT1          <---------YAB1  --------->MYB46(3)<---------YAB1          --------->MYB52(1)    ---------->ID1    ---------->DOF2        >>>>>>>>>>MYB80<---------DAG2   <----------DOF2        - ------TOE2(3)  --------->MYB52(2)--------->YAB1----------->RAV1(1)   <------------CBF  <-----------GT1   agatttgttgttaattgttagtcacaaagaatattatgagaattttaaaccaacaaaaaaaactttatgagaaattggccttttttgaattaactgttat  17238400                                                          <---------TOE1(3)                                                ----------->GT1                                               --------->HSFB2a(2)                                               <---------HSFB2a(2)                                              <---------LBD16                                            --------->ARR14(2)                                            --------->GLK1(2)                                         <---------------AGL15                                         --------------->AGL15                                        ----------------->AGL1                                        ----------------->AG                                        <-----------------AGL1         ------------>CBF               <-----------------AGL2        --------->LBD16                 <-----------------AGL3        ------>NtERF2                   ----------------->AGL2       --------->ANAC46                 ----------------->AGL3                 ------>ZmHOX2a(2)    <---------ARR14(2)              <----------DOF2       <---------TOE2(3)   <------ZmHOX2a(2)    --------->ARR14(2)       <-----------GT1<---------ARR14(2)           --------->ANAC46    --------->GLK1(2) <----------DOF2  <-----------------AGL1          ---------->DOF2 -------->YAB1     *TSS     <---------ICU4 <---------CCA1(2)     ----------->RAV1(1)               --   attcaaaatccgccaataacatcgctctaattatctctctttcccaaatctggaaaatttagggttccaacaaaaacgcgatcgcattacccaaaaattc  17238500              <---------ANAC58                                                                 <-----              <---------ANAC58               <----------DOF2                                  <------      <---------At4g35610                   <---------ANAC58                       --------->ANAC46 ------->ARR14(2)  ------>ZmHOX2a(1)        <---------ANAC58  ------>ZmHOX2a(2)    <-----------GT1 --   aaatttgcaactgatttcgtcctgtttgaatcactccaattctattgctttcttcgtcgtttgatccaaaacagtgagaagcgatacaccattttttctg  17238600                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                          <---------ARR11(3)                     ----                                                          --------->ARR11(3)                    -----                                                       <---------MYB52(1)                       <----                                                 --------->TGA2(2)                              <----                                                 ----------->HVH21                              <----                                                <-----------TGA1                               ------                                                <-----------HVH21                              <-----                                               --------->TGA2(1)                               <-----                                               --------->ANAC58              --------->ANAC58  ------                                               <---------TGA1a         <---------MYB46(3)   ---------                                               --------->TGA1a       <------NtERF2          ---------                                               --------->O2         <---------DEAR3(2)   <---------ARR14(2)                                               <---------O2 ------>ZmHOX2a(2)--------->ANAC58  <-----                                               <---------TGA2(1)    <---------MYB46(3)   --------->ARR14(2)                                               --------->ANAC58    <---------DEAR3(1)  <---------HSFC1(2)           <---------AHL20(2)                  --------->bZIP60(2) <---------ANAC46    --------->HSFB2a(1) ----------->GT1                               --------->ANAC46   ------>NtERF2        <---------HSFB2a(1) --------->ALFIN1                              <---------bZIP60(1)<---------ABI4(1)    --------->HSFC1(2) <---------ANAC46                              --------->bZIP60(1)<------NtERF2        <------MYB83-- ----HSFB2a(2)                                <-----------STF1 <---------LBD16   --------->MYB52(1)-- ---LBD16 <---------YAB1               <----------CDC5--------->LBD16--------->At5g28300 --------->GLK1(2) ------->ALFIN1 <-----------GT1        ==================MYC_MYB<---------DEAR3(1)     <------MYB46(1)   ggtgtgtgaatttttattttaccccaaattagattagagacgatgagcgacgtcaccggtgatctcgcggcggtgagtgaagccaagggaggttctgacg  17238700      --------->GLK1(1)      <---------GLK1(1)     <---------ARR14(2)     --------->ARR14(2)   --------->LBD16  --------->LBD16 <---------LBD16 ------NtERF2 --------SPL7 --------ATERF1(1) ------>RAP2.3(3) ------>RAP2.3(2) ------>DEAR3(1) ----->DEAR4(2) ----->ATERF1(1) ----->ERF1 ---NtERF2 ----->RAP2.3(1) ----->ORA47(2)                                          <---------------AtSPL8 ->NtERF2                                                --------------->AtSPL8 -----ATERF1(1)                                      ---------->DOF2 -----RAP2.3(1)             <---------ALFIN1       <------NtERF2           --------->ZAT18 -----RRTF1(1)         --------->ALFIN1          <---------ATERF1(2)       <---------ZAT18 --->bZIP60(1)         <------NtERF2             --------->ATERF1(2)       --------->ZAT14 ----bZIP60(1)       <---------ANAC46            --------->ETT(1)          <---------ZAT14 ----O2              <---------ANAC58            <---------ETT(2)      --------->HSFB2a(2) --->ANAC46          <---------ANAC58           --------->RAP2.6(3)    <---------HSFB2a(2) -->HVH21      <---------REM1(1)               <-----------HVH21       <---------------AtSPL8 -->TGA1       --------->ALFIN1             <---------At4g35610       <---------ANAC46 ----bZIP60(2) ----------->HVH21            <---------ZAT2    --------->ANAC58 ------->ABI4(1)     --------->ALFIN1       --------->At4g35610<---------MYB59          <---------ICU4 ---->NtERF2<---------DEAR3(1)              --------->ZAT2    --------->ANAC58--------->ANAC46   ccgcccggatatcggaggtgaaggcgtggctcacctctcagttcgaagctgtcggcaaagaagtacccaatttcgagtacactcatcgaagcattaccca  17238800                                                                <---------ANAC58                                                       <---------DOF5.7(2)                        <--                                                       --------->MYB52(1)                         <--                                           ------>NtERF2<---------TOE2(3)            <---------ANAC58                                           >>>>>>>>>>>>>>>>>LFY <---------ANAC58     <---------ANAC58                                  <-----------RAV1(2)<---------MYB52(2)            <---------ARR11(3)                        --------->ANAC58<---------ATERF1(1)   <-----------GT1      --------->ARR11(3)                        --------->ANAC58------>NtERF2--------->DOF5.7(2)        <---------GLK1(2)<---   tttgtataatctcgctaccgcttctcaagctaagtctcaggctgccaccattgtcgctaacgattttcgtctcaaggcttcagaatatcgtgctcaaggt  17238900  Previous    Next  AGI:  At2g41342.1    Description:  similar to unknown [Picea sitchensis] (GB:ABK27016.1) Range:  from: 17237611    to: 17238115    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g41350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G21980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69456.1) Range:  from: 17238419    to: 17240635    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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