Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------GLK1(2)  <---------ANAC58                                              --------->YAB1    ----------->HVH21        <---------ANAC46                                              <--------- ---------ANAC58             <---------ANAC58                                         --------->ICU4 ---------ANAC46         <----------DOF2                                         --------->ANAC58 ---------ANAC58   ---------->ID1                                                --------->ANAC58<--- ------->MYB52(2) <-----------GT1                                              ---------->DOF2   <--- ---TOE2(3)  <---------AHL20(2)                    <-----------GT1      <---------ICU4<---------ATHB12   ttacttgggaccgatttttttttccttctttgcgttagaaaaaacaaaacatatcactgtttgtatcaacaccaaaattgcaaaagcaatgaataacaac  17206000           --------->ANAC58 --GT1   <---------AtLEC2              <-------GAMYB                      <---------ICU4   ---------- ------DAG2--------->ANAC58           <-----------RAV1(1)                <---------------AGL15 -------DOF2                <---------AHL20(2)                         --------->YAB1    ---------->DOF2   ttttagcatttgcaagaaaacatttgatatttttttgtttctgttgaatattaaactaaactttcaaattttttcataattttagaaatagaaaagtata  17206100                         <---------MYB46(3)                      <------MYB46(1)                     <---------MYB46(3)                     <---------AtMYB61                  --------->ATHB12                 <---------YAB1               <---------MYB52(1)    --------->ANAC58           <---------DOF5.7(2)  <----------ID1    <-----------GT1 <---------WOX13(1)                                    ----------->HVH21    --------->MYB52(1)<------MYB83   --------->ANAC58              ------>ZmHOX2a(2)  <-------TEIL<--    ------------>AtMYB77 --------->MYB55(2)                      --------->ARR11(3)  <-----------HVH21 ->GT1     <---------At5g28300<------ZmHOX2a(1)--------->CCA1(2) <---------ARR11(3)  --------->DOF5.7(2)   tagaattaacagttaccgtttgattggtgggaggaagacaagaacgaagagatgagaacattgtgttgatcttcttgcgacgctcacgttcactcgcgtt  17206200                                                                                           ------->GAMYB                                                                                           ----------                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                         --------->At4g35610                                                                                        --------->MYB52(1)                                                                                        ----------->RAV1(1)                                                            <---------GLK1(2)        --------->LBD16                                                      --------->ANAC58             <---------LBD16                                                      --------->ANAC46       <---------MYB52(1)                    --------->ANAC46                  --------->ANAC58      <-----------HVH21                   <---------LBD16                  --------->At4g35610    --------->DEAR3(1)       - -------YAB1      <---------ALFIN1         <---------MYB52(1)            <---------At5g28300        -   gtgattaagcttcttcatcaccacgggattgtctagtaatgttctgttattctcagacgacacattctcatgagtcaccgtcaagtccggcaacggaaaa  17206300                                                          --------->RAP2.6(2)                                                         <-----------------AGL2                                                         <-----------------AG                       <---------MYB46(3)               --------->At4g35610                      <---------DEAR3(1)                <---------ZAT2                      <---------TOE1(2)                 <---------At4g35610                      <---------TOE2(2)           --------->ANAC58               <-------TEIL                       --------->ANAC58             --------->ARR14(2)                --------->LBD16             <---------ARR14(2)               --------->ANAC46       --------->ALFIN1<---------DEAR3(2)    <---------LBD16      ------->MYC3   <------NtERF2         ------>ZmHOX2a(2)                           <---------ZAT14     --------->ANAC55(2)                  <---------GLK1(1)                            <---------ZAT18     <---------ANAC55(1)                  --------->GLK1(1)            <---------AHL20(2) ->GT1<-------MYC3 <---------DEAR3(1)    <---------ARR11(3)          --------->CCA1(2) --------->ZAT14 -------->ANAC58 <-----------HVH21       --------->ARR11(3)<---------RAP2.6(3)         --------->ZAT18 -------->ANAC58--------->ANAC55(2)     --------->YAB1<-----------RAV1(2)      <----------ID1   tcaagaaacgtgttggatacgtcgtcggtttcatagaagctatgatctccgcaaggccagccgaaattgggatataatggagggacaagtgcacacattt  17206400                                                                          <-------GAMYB                                                                         --------->MYB46(2)                                                      <------MYB83       --------->MYB52(2)                                                      <------MYB46(1)    --------->MYB111(1)                                                    <---------MYB52(1)   <---------MYB46(3)                                                    <--------P           --------->MYB55(2)                                                   <-------GAMYB         --------->MYB111(2)                                         --------->GLK1(2)         <---------ANAC46            ------                                     <---------HSFC1(1)       <---------At4g35610      <---------ANAC46                      <----------DOF2<---------HSFB2a(2)     <---------YAB1        <---------YAB1            <-----------GT1          --------->HSFB2a(2)  ---------->TaMYB80     --------->AHL20(2)         ----------->GT1     ---------->ID1       <---------MYB46(3)   <---------MYB52(1)      ------   tgagttttagatagttactctgttcttttttgtctctctctagaagctgtttcggttgggattatgctgatgtgttagttggattatttatgtggacact  17206500                                                                                                =====                                                                                                <----                                                                                            <--------                                                                                       <------------CBF                                                                                     <-------TEIL                                                                                --------->AHL20(2)                                          >>>>>>>>>>GT-3b                  <---------AHL20(2)   =====                                       --------->ANAC58                    <---------AHL20(1)   -----         ----------->TBP               --------->ANAC58                    --------->AHL20(2)   -----       <-----------TBP         --------->ANAC46                <---------ANAC46 <---------AHL20(2)       --------->AHL20(2)      --------->ANAC58             <-----------RAV1(1)--------->AHL20(2) --->ANAC58                    --------->ANAC58     <---------ATHB12       --------->AHL20(1)   <---- --->ANAC58                <---------ALFIN1       <---------ICU4     --------->ANAC55(2)  <---------MYB46(3)   catttttgtttatatatacactgatacacacacacggacacaagaaaaatactaatgactctgtgttgtatatgtaataaattaaaatacattgggtcac  17206600                    <-------GAMYB                  --------->ALFIN1                 ------->MYC2                 ------->MYC3                 <-------MYC2                 ------->MYC4                 <-------PIF5                 <-------MYC3                 <-------MYC4                 ------->PIF5                <---------TGA1a                ============MYC_MYB                <---------ANAC55(2)                <---------O2                --------->TGA1a                --------->ANAC55(2)                                                --------->ANAC58       <-------TEIL<---------MYB46(3)                                           <-------TEIL --------->ZAT18========================bZIP_DOF                               --------->CCA1(2) <---------ZAT18--------->O2                                         <---------WRKY18(1) =======================================bZIP_DOF                    --------->WRKY38(1)     --------- -----TGA1a--------->WRKY12        --------->ANAC46                 --------->WRKY12     --------->YAB1 ---HVH21  --------->WRKY38(1)     <---------------AGL15    <------ZmHOX2a(2) <---------ARR14(2) ===========================MYC_MYB--------------->AGL15  --------->YAB1    --------->LBD16 <-------- ---->TGA1a----------->HVH21 <---------DAG2             <---------TOE1(2) <---------LBD16--------->AHL20(2) ---->O2<---------ANAC58     <----------DOF2=======================HOX2a_HOX2a--------->ARR14(2)----- -----O2<---------ANAC58 <---------ZAT18    <------ZmHOX2a(1)  ----------->RAV1(2) --------->ANAC58   gagtggacatgcgttgacacgtggttgagcacttttcccccaagtaggagcatgttccaaggatcacctgttgacctccggatacaggcattaatatcct  17206700                                                   <---------ANAC55(2)        ----------->GT1                          <---------AHL20(2)        --------->YAB1                        <---------ICU4                                ---------    <---------YAB1            --------->ZAT6  --------->YAB1                                --------- >ARR11(3)                  <-----------GT1  <---------YAB1   ------->TEIL                 <---------AHL20(2) -ARR11(3)    --------->AHL20(2)         ----------->GT1------->TEIL          --------->YAB1<-------- ->ZmHOX2a(1) <---------AHL20(2)         <---------ANAC46  <---------YAB1  --------->WOX13(1)  <-----   aatgttcttatcgtaatttataacataagtttacactattgtatcgtataattacatgaatatgaatgtatgagtattaatcaaaaattctaaatatttt  17206800                                                                                              -------                                                                                              <------                                                                                              <------                                        <---------AHL20(2)                                   <-------                                    <---------AHL20(2)                                  --------->CCA1(2)                                    --------->AHL20(2)                                 <---------ARR14(2)                                   <---------AHL20(2)                                  --------->ARR11(3)                                   --------->AHL20(2)                  --------->MYB46(3)<-------TEIL >AHL20(2)                         <---------AHL20(1)               <------ZmHOX2a(1)  --------->ARR14(2) >AHL20(1)                   --------->ANAC58                --------->AHL20(2)  --------->YAB1 -AHL20(1)                   --------->ANAC58             ----------->GT1     --------------->AGL15 ----AHL20(2)          --------->AHL20(2)              --------->MYB52(1)     <---------------AGL15 -   ataatgtgtcaaaatagaaattcgatttattaagcaaattatttagttagcaaaaaataacagttaaataggaacaactactataagaagatacagaata  17206900  Previous    Next  AGI:  At2g41240.1    Description:  BHLH100; DNA binding / transcription factor. similar to BHLH039/ORG3 (OBP3-RESPONSIVE GENE 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G56980.1); similar to basic helix-loop-helix family protein [Thlaspi caerulescens] (GB:ABD37969.1); contains InterPro domain Achaete-scute transcription factor related (InterPro:IPR015660); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 17205409    to: 17206398    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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