Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                 <------ZmHOX2a(2)        ---------->DOF2        <---------At4g35610                <-----------GT1      <---------ARR14(2)     <----------ID1 --->YAB1      ----------->GT1   --------->ANAC46               --------->ARR14(2) ---------->DOF2 >WOX13(1) --------->ATHB12  <-----------GT1            -------->P          --------->MYB46(3) ------   gaattggttcaactgattagaaaattagaaattacacttcaaattttacaatgactcttaccagacgatccaactcgaatcaccctaaaacgaaaagaaa  17198200                                                                                                    -                                                           --------->YAB1                         ---                                                        <---------ICU4  --------->ANAC58          <--                             --------->YAB1             --------->YAB1------>NtERF2               ---                        --------->AHL20(2)             --------->ICU4--------->DEAR3(1)  --------->At4g35610 ------->GT1            <---------AHL20(2)     --------->ARR14(2)    <---------DEAR3(1)  <-------GAMYB ---->DOF2---------->DOF2 <-----------GT1 <---------AtLEC2<---------YAB1--------->ANAC58 <---------At4g35610   agaaaaaacataaaaagggtctaaattttaatcatatagaaactgcatggattcacaattatcatcaaacgacgacgcattcacatatgtgagttgagtc  17198300                                                                                                    <                                                                                                   <-    <------ZmHOX2a(2)                                                                            ----   <---------ARR11(3)                      --------->HSFB2a(2)                               -------- -------->HSFB2a(2)                  <---------ANAC58   ---------->DOF2                     --------- -------->RAV1(2)          --------->YAB1  <---------HSFB2a(2) --------->At4g35610        <---------bZIP60(2) -------At4g35610          --------->AtMYB61        <---------ZAT6                        <---------ANAC46 ------>At4g35610    --------->ZAT6  <---------ANAC58<-----------HVH21----------->GT1    <---------AtMYB61   atctggatcatcgactcattgtctcactaccatcacattacatgcctagaagtagtgtcaaaggaagatgaagagagaaaatgagcttgatgaggtggat  17198400                                                                              --------->At4g35610                                                                              <------NtERF2                                                                             <---------ATERF1(1)                                                                             <---------RAP2.3(1)                                                                             ----------->RAV1(1)                                                                            <---------RAP2.3(2)                                                                            --------->ATERF1(2)                                                                           --------->At4g35610                                                                           <------NtERF2                                                                          <---------DEAR4(2)                                                                          <---------ATERF1(1)                                                                          <---------RAP2.3(1)                                                                         <---------RAP2.3(2)                                                                         <---------DEAR3(1)                                                                        --------->At4g35610                                                                     --------->ATERF1(1)                                                                   <---------ANAC46                                                                  <---------At4g35610                                                                  <---------LBD16                                                                  <------NtERF2                                                                  --------->ATERF1(1)                                                                  --------->At4g35610                                                                  --------->RAP2.3(1)                                                                 <---------RAP2.6(1)                                                                 <---------ORA47(2)                                                                 <---------RRTF1(1)                                                                 <---------DEAR4(2)                                                                 <---------ERF1                                                                 <---------RAP2.3(1)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2<---------At4g35610                                                                <---------ANAC46                                                                --------->ATERF1(2)                                                                <---------ATERF1(2)                                                                <---------DEAR3(1)                                                                --------->DEAR3(1)                                                                <---------RAP2.6(2)                                                                <---------RRTF1(2)                                                                <---------RRTF1(3)                                                                --------->ALFIN1                                                                <---------RAP2.3(3)                                                               <---------At4g35610                                                               --------->DREB2C(1)                                                               --------->RAP2.3(1)                                                               --------->ATERF1(1)                                                               --------->DEAR4(2)                                                               <---------ABI4(1)                                                               <------NtERF2<---------RAP2.6(2)                                                               --------->At4g35610                                                              <---------ERF1<---------DEAR3(1)                                                              <---------RAP2.3(1)                                                              <---------ORA47(2)                                                              <---------DEAR4(2)                                                              <---------RAP2.6(1)                                                              <---------RRTF1(1)                                                              <---------ATERF1(1)                                                              ------>NtERF2--------->RAP2.3(1)                                                             <---------ATERF1(2)                                                             <---------RAP2.3(3)                                                             <---------RRTF1(2)                                                             <---------RRTF1(3)                                                             --------->ATERF1(2)                                         --------->GLK1(1)   --------->DEAR3(1)                  ----                                         <---------GLK1(1)   <---------DEAR3(1)                  ----                                      --------->LBD16        <---------RAP2.3(2)                 ----                                    <---------LBD16          <---------RAP2.6(2)  --------->MYB52(1)                                   --------->MYB52(1)       <---------ABI4(1)------>NtERF2       ----                                  <---------ALFIN1          <---------LBD16--------->ATERF1(1)  -----                                  --------->DEAR3(1)        --------->ATERF1(1)   <---------ARR14(2) ---------AHL20(2)                --------->AtMYB61       <---------DEAR3(1)<---------ATERF1(2) ----- --------YAB1                    --------->MYB46(3)   <---------YAB1 <------NtERF2--------->ARR14(2) ----->YAB1        <---------ICU4<---------ABI4(2)   --------->ARR11(3) --------->ATERF1(1)   ------- --->GT1   --------->AHL20(2) --------->At4g35610    <---------ARR11(3) <---------At4g35610   <------ >ALFIN1 ----------->GT1   --------->At4g35610  <---------ATHB12<---------RAP2.3(2)--------->RAP2.6(3)   aataaatggctaagtaaataagcattagcatcagcaccaccggaattcccatcaatatcatcggcggcggcggaagcggcggcagaacggctggaagaac  17198500                                                        --------->ARR11(3)                                                        <---------ARR11(3)                                                       <---------CCA1(2)                                                  <---------TOE1(2)                                                  <---------TOE2(2)         --------->AtMYB61                     <---------ANAC58                                   --- ----->DEAR3(1)                                <---------ANAC58                            <---------AHL20(2) ----->DREB2C(2)              <---------ICU4   <---------ANAC46                            <--------- --->GAMYB              --------->YAB1      ------>ZmHOX2a(1)                              --------->AHL20(2) ----->RAP2.6(2)       <---------ATHB12  <------ZmHOX2a(2)         <----------DOF2       --------->AHL20(2) ---->DEAR3(2)       --------->WOX13(1) --------->ARR11(3)      <-----------GT1          <---------AHL20(2) ---->MYB46(3)   --------->ANAC46       <---------ARR14(2)      *TSS                     <-----------TBP -->ARR14(2)   <---------ALFIN1         <---------ARR11(3)      <---------AHL20(2)     <-----------TBP ---ARR14(2)   --------->AtMYB61        --------->ARR14(2)--------->TOE2(3)       ------->TEIL <-----   cgccaatagcaccatcaccactccaatcacaaacatttcgacgatcctttcgtatgtaaatcttatttactttcttagttgatgcacctatatatatata  17198600                    <----------DOF2   <---------YAB1                    <---------DAG2  --------->YAB1                 <-----------GT1    <---------ICU4            --------->AHL20(2)     --------->ICU4                                                 <--            <---------AHL20(2)   --------->YAB1                                                   ---         --------->ARR11(3)     <---------AHL20(2)                                              -----         <---------ARR11(3)     --------->AHL20(2)                                              <---- -------->GT1 --------->YAB1  <----------DOF2                                            --------->At4g35610 --TBP <---------TOE2(3)  <----------DOF2                                                <---------At4g35610 ----AHL20(2)<---------YAB1   --------->TOE2(3)         <----------DOF2      ---------->DOF2  <------   atgtcaaataagattttaataactttttctttctttaattatgtttttgttcgttttccttttttatgtgtgtgagagagaaagacgttacagcttacag  17198700                                          --------->YAB1                   <---------ALFIN1      <---------ATHB12                  ------>MYB83       --------->MYB46(3)                            <---------YAB1            ----------->HVH21        <---------MYB55(2)     <---------DAG2        <---------AHL20(2)  <---------At4g35610       <---------ANAC58                <----------DOF2     <---------YAB1 -------REM1(1)   ------>MYB46(1)   --------->ANAC58    -------->P            --------->AHL20(2) ------>ALFIN1    -------->P<---------ANAC58      <---------AHL20(2)          <---------AHL20(2) ---->At4g35610  ----------->RAV1(1)--------->ANAC46  --------->MYB46(3)     <---------AHL20(2) -----At4g35610 --------->AtMYB61   --------->ANAC58<-----------GT1       <---------AHL20(2) -----RAV1(2)  --------->MYB46(3) <-----------GT1 --------->AHL20(2)  <----------DOF2              --   gtgaagctcatgcactgaccaacaccatttgcttattcacccaatgacaaaattaaacaaccctttaccattctttttatttatttttattcagtagtat  17198800                                                                                                <----                                                                                              -------                                                                                     ----------->GT1                                                                                     <---------ANAC55(2)                                                                                     --------->ANAC55(2)                                                                              --------------->AGL15                                --------->AHL20(2)                         <-----------GT1    <------                              --------->TOE2(3)                         <---------GLK1(2)  --------->YAB1                              ================================================================MADS_MADS                              <----------DOF2                         <---------AHL20(1)   <---------ICU4                           <-----------GT1                            --------->AHL20(1)  --------->ICU4                        <---------ICU4                         <----------ID1----------------->AGL3                       --------->ICU4                          ----------->GT1<---------------AGL15             <------ZmHOX2a(1)--------------->AGL15  <-----------GT1  <---------ARR11(3)  <---------YAB1         --------->TOE1(2) <---------AHL20(2)       <-----------GT1   --------->ARR11(3)--------->YAB1 ------->TOE2(3)       --------->AHL20(2)     <----------DOF2 ----------->GT1----------------->AGL2   atgttaatttacataggaatttgaaatatttactttaaatgtcattttctttttttaacatgtaagggaaaaaatattctccatattaagtaataataac  17198900                                                            <---------ZAT14                                                            <---------REM1(2)                                                            --------->ZAT14                                                          --------->ANAC46                                                        --------->ZAT6                                                        --------->ANAC46     <-----------GT1                            ---------->DOF2--------->ANAC46 --------MYB.PH3(1)                            <---------AHL20(2) -->MYB52(1)                       --------->DAG2    --------->ARR14(2)               --------->ALFIN1 -----GT1       <---------TOE2(3) ---------->DOF2    --------->ZAT14     <------ZmHOX2a(1)     <-----   tgatttttttctcttgttaatgaaattgaaatttgataaagctccatattaaaagtatacactacacacattttaggagaaatgaaatgtgtgtgtaatg  17199000                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                          --------->YAB1                                                         <---------YAB1                                                       --------->YAB1                                                      <---------AHL20(2)                        --------->ANAC58              --------->AHL20(2)                        --------->ANAC46              <---------YAB1                        --------->ANAC58        <---------AHL20(2)            <---------HSFB2a(2)                 --------->AHL20(2)            --------->HSFB2a(2)               --------->AHL20(2)         <---------ARR14(2)                   <---------AHL20(2)                                   <-         --------->ARR11(3)                 --------->AHL20(2) <-------TEIL       --------->bZIP60(1)        <---------GLK1(1)      --------->AHL20(2) <---------AHL20(2)              <---------bZIP60(1) ----ANAC46<---------LBD16     <---------AHL20(2) --------->AHL20(2)    <---------ANAC46  <---------TOE2(3)   tgtattgttgatatctggaaaacaaaacgcaatttatattatacatatatatatatataattatatacatgtttatgtgtattgacatcatataggttgt  17199100  Previous    Next  AGI:  At2g41225.1    Description:  unknown protein Range:  from: 17198106    to: 17198564    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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