Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ----------->ARR10                                             --------->MYB59                                      ----------->GT1                                      <---------ANAC55(2)                                      <---------At4g35610                              <-----------------AGL1                              <---------ANAC46                              <---------ANAC58 --------->ARR11(3)                    --------->ALFIN1  --------->ANAC55(2)                 --------->DAG2      --------->MYB59                                 --------->CCA1(2)               ---------->DOF2<---------ANAC58 <---------GLK1(2)              <---------YAB1           <---------------AGL15    <-----------RAV1(2)         ---------->DOF2 ---------->DOF2           --------------->AGL15  <-----------HVH21     ---------->DOF2   <----------DOF2    <-------   agagtttttatttctctaaaaggtggaaagtttcttggtcaggtaattagatactgaataaagacatgaagcaaaactttataaaagatagacaactttg  17184300                       <---------YAB1                     --------->YAB1               <------MYB46(1)               <------MYB83              <---------TOE2(2)                                                      --------->TOE1(3)           <---------ANAC55(2)                                           --------->ATHB51           <---------ANAC46                                              --------->YAB1           <---------ANAC58                                              <---------ICU4           <---------ANAC58--------->ARR11(3)                            -------->ATHB1           <---------ANAC55(1)                                           <--------ATHB1           --------->ANAC55(2)<----------DOF2                           --------->ICU4      --------->MYB46(2)   <---------ARR11(3)                           <---------ATHB51          <--      --------->MYB111(1) <---------GLK1(1)                             <---------ATHB12         <---      --------->MYB52(2)  --------->GLK1(1)                         ----------------->AGL3--------->ZAT6   --------->YAB1   <---------YAB1              ----------->GT1     =================================   --------->TOE2(3)--------->ICU4            ---------->DOF2     --------->GLK1(2)<---------TOE1(3) ---DOF2  --------->MYB59<---------ARR11(3)  <---------ATHB12---------->DOF2       <---------TOE2(3)<   ggcaatgttagttacgtaggtgatgatgatatcttttgttttcttcaataaagaaataagagtaaaagattccaataattgttctaaggttaacactcgc  17184400         <----------DOF2         --------------->AGL15         <---------DAG2                        <---------At4g35610         <---------------AGL15                 --------->At4g35610       --------->AHL20(1)        <-----------------AGL3  <---------ARR14(2)                       <---------AHL20(2)        --     ---------->ID1             --------->GLK1(2)                        <---------AHL20(1)        <- -----GAMYB                    <---------GLK1(2)                         --------->AHL20(2)       --- --------RAV1(1)    <---------DOF5.7(2)  ---------->ID1    <---------ZAT18                  --------- =========================MADS_MADS  --------------------->WRI1         <---------AHL20(2)  --------- ---------MYB46(3) <---------WRKY12  <----------DOF2      ---------->ID1--------->AHL20(2)  ---------   tgttgttgtcgctttatgtggtaaacgtatagagaatctctttgttctcttctgccatttgtccccttacaaaattaaatttgcgactcttcaaacgcta  17184500       <---------AHL20(2)     <---------YAB1    --------->AHL20(1)   --------->ATHB51<---------ANAC58   <---------AHL20(2)   <---------ICU4  <---------ANAC55(1)   --------->AHL20(2)  --------->ICU4   --------->ANAC55(2)               <---------AHL20(2) ------->AHL20(2)  <---------ANAC55(2)               --------->AHL20(2) --------AHL20(2)  <---------ANAC58                 --------->AHL20(2) ------>AHL20(2)   <---------ANAC46          ------->PIF5        <-----------GT1 >ANAC46      --------->ATHB12               <-------PIF5  --------->ANAC55(2) >ANAC58 <---------AHL20(2)             --------->ANAC58 <---------AHL20(2) >ANAC58--------->AHL20(2)              --------->ANAC58 <-----------GT1        --------->TOE2(3)   <   tttaattattttaaattgattacgtattcttgaaattgagccaagcacttgccatttatttacatattaactacttattcaacattagatttgtagtcta  17184600                                                    --------->ANAC46                                                    --------->ANAC58                                                    --------->ANAC58                                                  ------>MYB46(1)                                                  --------->MYB52(1)                                                  ------>MYB83                                                 --------->MYB55(1)                                                <---------MYB46(2)                                                --------->AtMYB61                                                --------->MYB46(3)                                           <-----------TGA1                                           <-----------HVH21                                   ------                                          <---------ANAC58                                <----------ID1                                          <---------ANAC58       --------->TOE2(3) <---------ANAC58                                      --------->CCA1(2)------->TEIL                <---------ANAC58                          ----------->GT1 --------->ANAC46     <---------ARR11(3)  <---------ANAC46                       --------->GLK1(2) <-------TEIL<---------ABI4(2)           ------>ZmHOX2a(2) -------TEIL   ---------->DOF2   ---------->DOF2<---------MYB55(2)              <------ZmHOX2a(2)  --   tattcattcaattgttctaaagtacaatctgtaaataaagacatgcgtcaccaaacgcaccgctaaatcttagaaaatcgcgatcgcgtttgaagacaaa  17184700                                                       ------>NtERF2                                                      --------->DEAR3(1)                                                      <---------DEAR3(1)                                                    --------->MYB52(1)                                                   ----------->HVH21                                             ------>MYB83                                           ------->GAMYB<------NtERF2                                          *TSS ---------->DOF2                                         --------->ANAC58                                         --------->ANAC58                                        ------->GAMYB--------->ATERF1(1)            --------->ZAT18                                       --------->MYB46(3)                      <---------ANAC58        --------->AHL20(2)    XXXXXXXXXXXXXXXXXXXX>MIR3932A/B             --------->ZAT14        <---------AHL20(2)   <----------DOF2 ------>MYB46(1)             <---------ANAC46 ---->DOF2            --------->YAB1   <---------MYB55(2)              ------>ZmHOX2a(1) --------->YAB1 -------->DOF2     <----------DOF2     <---------MYB111(2)<---------MYB46(3)   <---------ANAC58   agaaagctaataaaactagcactttcatcaactttacaacaacaaccaaataagcgacggcgattagagagtcctgcgtagtcgtgctcactgatcactc  17184800                                                                      <---------ALFIN1                                                                     <---------ZAT18              ------>ZmHOX2a(2)                                      --------->ZAT14             <---------At4g35610                                     --------->SPL7             --------->At4g35610                                     <---------ZAT14            <---------ARR11(3)                                     --------->ZAT14          <---------MYB52(1)                                       <---------SPL7         --------->LBD16                                          --------->DEAR3(1)        <---------ANAC46                                         --------------->AtSPL8        <---------ANAC58                                      --------->ZAT14         XXXXXXXXXXXXXXX        <---------ANAC58                                      <---------ZAT18       ----------->GT1        --------->ANAC55(2)              <---------ANAC46     <---------ABI4(2)--------->ZAT14        <---------ANAC55(1)              <------MYB83         <---------ZAT14 --------->DEAR3(1)        <---------ANAC55(2)              <------MYB46(1)      --------->ABI4(2)<---------ZAT14    <-------MYC2                        <------MYB46(1)       --------->ZAT18--------->ANAC46    <-------MYC3                        <------MYB83       --------->LBD16  <---------At5g28300    ------->MYC3                      <--------P       --------->ARR14(2) <---------ZAT14    ------->MYC2                      <---------MYB52(1) <---------LBD16  --------->ZAT14    ------->PIF5                     <---------MYB52(1)--------->GLK1(2)--------->ANAC46        -----    <-------PIF5                    <---------MYB46(3) <---------ARR14(2)<-----------HVH21      <----   ttagctcgtgccgtgatctgagactgagaaaacatcaccggttgggttttctctacgattccggtgcaccgtacacttcaccgcagtggataaatctctg  17184900                                                                       <---------DAG2             ---                                                                       <----------DOF2       <-------          <----------DOF2                                           =================================          <---------DAG2                                            ------>ZmHOX2a(2)        <-------       <-----------GT1          ------->GAMYB                  <------ZmHOX2a(2)      <-----------ARR10 XXXXX>MIR162A/B               --------->MYB46(3)        --------->ARR14(2)           --------->ARR14(2) ---->At4g35610              ----------->RAV1(1)         <---------ARR14(2)           <---------ARR14(2) -----At4g35610             --------->REM1(1)           <---------GLK1(1)         <------NtERF2 <----   cttccattttgactttttgaaaataaaactacaacagtcgcagagagattaaacttcgaaatccgatcgatcgctttctctctcggcgtttcttctcagg  17185000                                      <---------At4g35610                                      --------->At4g35610                                      --------->ZAT2                                     <---------ARR14(2)                                     --------->ARR14(2)                                   --------->LBD16                                 <---------LBD16                             --------->ZAT2                             --------->At4g35610         ------>NtERF2                             <---------At4g35610         --------->LBD16                             <---------ZAT2             --------->LBD16                          --------->LBD16           --------->ARR14(2)                         <---------HSFB2a(2)        <---------ARR14(2)  --------->ANAC46 <-------TEIL            --------->HSFB2a(2)     <---------ANAC58      --------->LBD16         <----- ------>At4g35610        --------->LBD16         <---------ANAC58      <---------HSFB2a(2)     ------ --LBD16                 --------->ANAC46   <---------At4g35610        --------->HSFB2a(2)     ------ ==HOX2a_HOX2a          <---------LBD16  <-------TEIL  <---------LBD16<---------ANAC46         <----- ----RAV1(2)    <---------ZAT14 --------->MYB52(1) <---------MYB52(1)<---------LBD16           <----- --ZmHOX2a(1)   --------->ZAT14 -------->P--------->REM1(1)<---------GLK1(2)               --------->ZAT6   agcttcattccatggctctacagtctcccggagctaccggagcttcatcttccgtttcccggcttctctcttccgcgaaattaagctctactaagactat  17185100                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                  <---------ARR11(3)                  --------->AGP1                  <---------ARR14(2)                                                   --------->At4g35610                  --------->ARR14(2)                   ------->GAMYB                <---------At4g35610      --------->WRKY38(1)                             <---------MYB52(2)          --------->ZAT14    <---------At4g35610                               <------------MYB.PH3(2)     <---------ZAT18    <-------GAMYB --------->ARR11(3)                --------->MYB52(1)    <------NtERF2--------->ZAT14    --------->At4g35610                          <---------ANAC58       <---------RAP2.6(2)   <-----------RAV1(1)------>ZmHOX2a(1)      --------->SPL7            <---------LBD16 <---------ZAT14 ------ARR10      <---------GLK1(2)         --------->MYB52(1)  --------->LBD16   --------->ZAT18 --->ARR14(2)    --------->At4g35610        ------>MYB46(1)     ------>NtERF2   --------->ANAC46 --->ARR11(3)    <---------At4g35610        ------>MYB83  --------->HSFB2a(1)<---------ZAT14 ----ARR11(3)   ----------->ARR10          --------->MYB55(1) <---------LBD16--------->ZAT14        < ----ARR14(2)<-----------HVH21    ---------->DOF2<---------ANAC58  <----------DOF2<---------ZAT14----   cttctctgttgacttcgtcagatcctactgtatttctaaaggaaccaaacggcgtaacgaactctccggctttcgcggctacagtccactgctcaagtcc  17185200  Previous    Next  AGI:  At2g41220.1    Description:  GLU2 (Glutamate synthase). Identical to Ferredoxin-dependent glutamate synthase 2, chloroplast precursor (GLU2) [Arabidopsis Thaliana] (GB:Q9T0P4;GB:O80665); similar to GLT1 (NADH-dependent glutamate synthase 1 gene) [Arabidopsis thaliana] (TAIR:AT5G53460.1); similar to GLS1/GLU1/GLUS (FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT5G04140.2); similar to GLS1/GLU1/GLUS (FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1), glutamate synthase (ferredoxin) [Arabidopsis thaliana] (TAIR:AT5G04140.1); similar to Ferredoxin-dependent glutamate synthase, chloroplast (Fd-GOGAT) (GB:Q43155); similar to Ferredoxin-dependent glutamate Range:  from: 17184742    to: 17195829    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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