Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <----------DOF2                                             -                                       <---------ANAC58                                          ---- ------->CCA1(2)                       <---------ANAC58                                        ------ ------>ARR11(3)           ------>ZmHOX2a(1)                                             --------->ANAC46 -------ARR11(3)           <----------DOF2                                              <---------LBD16 ------>ARR11(1)         ------>ZmHOX2a(2)                                           --------->CCA1(2) ------>ARR10 <---------ICU4       <----------DOF2                      --------->AHL20(2)--------->LBD16   gatatgaagtctctactaattgtttgatcctttcgagctttgctttgtttgctaaatttgtattggtgatttgattatatgtgtttgatacacggagaag  17180100                                                --------->AHL20(2)          <---------DAG2                 ----------->GT1       <-----------GT1                   <----------ID1 --------->DOF2                         ----------->GT1 ----->TOE1(3)     <-------TEIL       ---------->DOF2       <-----------RAV1(1)                  <--- --->GLK1(2)<----------DOF2    <---------WOX13(1)      ------->TEIL--------->ETT(2)       <----------   cttaaagtttcactctttgagttcatttactagattgatgaaaaggaaaaaaaaatgaacttatgttgttcgacagaatgcctcaacgagtttaactctg  17180200                       ------->TEIL                                                                --                     ------->GAMYB                                                                 <-                    <---------MYB52(2)                                                            ---                  --------->MYB52(1)                                --------->ARR11(3)           ----                --------->MYB46(3)                             <---------AHL20(2)             -------                <---------MYB46(2)                             --------->AHL20(2)             <------ ------MYB52(1) <---------MYB52(2)                  --------->AHL20(2) <----------DOF2--------->ANAC58 -GT1         <-----------GT1                     <---------AHL20(2)<---------ARR11(3)--------->ANAC58   tttttttcagtgattttaactaacgaacttattcgtctaaattggtccatattttaaaatatgaaataaatgtctttgtgctagagggaagcaaggagat  17180300                         <---------ANAC46                        --------->CCA1(2)                         <---------ANAC58                       <---------ARR14(2) ------------->AGL15     <---------ANAC58                    <---------TOE2(3) --------------AGL15 <---------ANAC58                        <---------TOE1(3)         <---------WOX13(1) -------------->AGL3 <---------ANAC58                  <---------MYB46(3)     ------>ZmHOX2a(1) ------->GT1       --------->ARR11(3)              --------->ATHB12           <----------DOF2 -->GLK1(1)--------->ARR14(2)                     <---------YAB1--------->ARR14(2)    <---------AtLEC2 ---GLK1(1)<---------ARR14(2)                   <----------DOF2<------ZmHOX2a(1)  <----------DOF2   gctaaatatagagaattcgagggtcttgcttgtttctctaaatttcaaggctttcattggtttgaggatatgaacgagtcctttctttgaatgacaaaat  17180400                                                                                          <----------DOF2                                                                                   <-----------------                              <---------LBD16       <-----------GT1            <-----------GT1                    --------->ICU4          ---------->ID1               <---------ARR11(3)                  ---------->DOF2           <-----------GT1              --------->ARR11(3)*TSS  <---    --------->HSFB2a(2)    --------->ARR11(3)   <----------DOF2          <---------GLK1(2)-----------    <---------HSFB2a(2)   <---------GLK1(1)<-----------GT1 <---------AHL20(2)<-----------GT1     <---   tagtttctaaaactgataagaaaagatgaaatctcggagacattttttcccttttaactatttttttggccattagatttttctctgtttttctttgttt  17180500                                                                                <-------TEIL                                                                              --------->ARR14(2)                                                                           --------->LBD16                                                                        ------>NtERF2                                                                  <----------DOF2                                                               <---------ARR11(3) -------ANAC81                                                 --------->ARR11(3) ---MYB83                                                     <---------At4g35610 ---->AGL15                                             --------->DAG2<---------ANAC58 ---MYB46(1) <---------HSFB2a(2)  ---------->DOF2      ---------->DOF2<---------ANAC58     ----------   ggtttggaacatggtctagagaaacattcaatccagtaatgctgcaatttgtaagaaaaaagtaagctctttgcctccgagattcacagaggcaaaagaa  17180600                                                                                                 ----                                       >>>>>>>>>ARR1                                             <---                                       >>>>>>>>>ARR2                                            >>>>>                     <-------GAMYB     >>>>>>>>>ARR1           --------->CCA1(2)        <---------MYB52(1)                    <---------MYB46(3) >>>>>>>>>ARR2       --------->YAB1               ------>ZmHOX2a(1)                <---------YAB1       <---------YAB1        <---------AHL20(2)          --------->TOE2(3)       ----------->HVH21         <----------DOF2           --------->AHL20(2)     <---------HSFC1(2)   <---------ANAC46 --------->MYB52(2)<------ZmHOX2a(1) --------->YAB1            --------->HSFC1(2) >DOF2<-----------HVH21   <---------YAB1         --------------->AtSPL8      --------->CCA1(2) <-----   aaatgacctgtgacacatatgtttgttgatgatacctttaggattgttatctaggtactaataatatacaggtttttagatagacgtttccttagtttaa  17180700                                                --------->SPL7                                              --------->TOE1(2)                                         ----------->HVH21                                         --------->WRKY38(1)                                       <------MYB46(1)                                       <------MYB83                        ------>NtERF2           <-        --------->ANAC58               <---------At4g35610                <---------ZAT18          --        --------->ANAC58  --------->HSFB2a(2) <---------SPL7         ---------->DOF2      --------->HSFB2a(2) ----->YAB1   ---------->DOF2          --------->At4g35610  --------->At4g35610     <---------ANAC46 ------------AGL15        <---------HSFB2a(2)<---------ANAC58  --------->ANAC58     <---------ANAC58 >>>>MYB98   --------->AtMYB61        <---------DEAR3(1)    --------->ZAT2--------->ZAT18 <---------HSFB2a(2) ------GT1<------ZmHOX2a(1) ---------->DOF2  <---------ANAC58  --------->ANAC58     <---------ANAC58   cataatgagcaaggaccaaagctatgttctaaaagcatgggaggtgaccgtgcgaaagactcagcaagcgaagaagcgggctaatagcgtttttggaaca  17180800                                                                         --------->At4g35610                                                                         <---------At4g35610                                             --------->YAB1           <---------At4g35610                                            ----------->TGA1          --------->At4g35610          <---------ALFIN1                --------->YAB1            <------ZmHOX2a(1)      --------->At4g35610                 <---------ICU4       --------->MYB52(1)               -----      <---------At4g35610        <---------At4g35610          ----------->HVH21             ---------    <--------P <-------TEIL    --------->REM1(1)             <---------MYB52(2)    <---------GLK1(1)   <---------MYB52(1)   -------->HAHB4   --------->ICU4    --------->AtMYB61       --------->GLK1(1) --------ARR14(2)       --------->YAB1 --------->YAB1     --------->MYB46(3)     <------ZmHOX2a(1) ------->ARR14(2)      <---------YAB1 <---------YAB1    --------->AtMYB61--------->ZAT2<-----------GT1   gtatcggtagctccacatacagataatgatactacaactgatgataatgacgatgagaccaccactaacaggagcagcttagaggaattctaccatgccg  17180900                                                                                        <---------AtLEC2                           --------->ANAC46                                             <---------ANAC46                           <---------O2                                                <------NtERF2                          <---------LBD16                                           <---------At4g35610                        <---------ZAT14                                             --------->At4g35610                        --------->ZAT14                                            <---------ATERF1(1)        <-----------------AGL1                                                    <---------DEAR3(1)-     <---------ANAC58   <---------REM1(2)            <---------ICU4              --------->RAP2.6(3)-     <---------ANAC58  <---------------AGL15        ------>ZmHOX2a(1)           --------->MYB52(1) <- ->NtERF2       --------->ZAT18          --------->YAB1                   --------->HSFB2a(2)------->TEIL >AtLEC2----------------->AGL1          <---------YAB1                    <---------HSFB2a(2)<-------TEIL   agagagtgcttcccaatggggactactacacggggcaatggtatgatagttttcctcatggccatgggaaatacctctggacagacggctgcatgtacat  17181000  Previous    Next  AGI:  At2g41200.1    Description:  similar to hypothetical protein MtrDRAFT_AC147961g27v2 [Medicago truncatula] (GB:ABD28332.2); contains domain EF-hand (SSF47473) Range:  from: 17178703    to: 17180209    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g41210.1    Description:  phosphatidylinositol-4-phosphate 5-kinase family protein. Identical to Phosphatidylinositol-4-phosphate 5-kinase 5 (PIP5K5) [Arabidopsis Thaliana] (GB:Q9SLG9); similar to ATPIP5K1 (ARABIDOPSIS THALIANA 1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1), 1-phosphatidylinositol-4-phosphate 5-kinase [Arabidopsis thaliana] (TAIR:AT1G21980.1); similar to phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis thaliana] (TAIR:AT3G07960.1); similar to PIP5K4 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE 4), 1-phosphatidylinositol-4-phosphate 5-kinase [Arabidopsis thaliana] (TAIR:AT3G56960.1); similar to Phosphatidylinositol-4-phosphate 5- Range:  from: 17180491    to: 17183885    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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